RNA–Protein interactions for RNA: snR49

snR49, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR49, Length 165 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR49snR49 YKR018CP36114 725 aa2.44□□□□□ -2.02
snR49snR49 RPN10P38886 268 aaKnown RBP2.44□□□□□ -2.02
snR49snR49 YIL077CP40508 320 aa2.44□□□□□ -2.02
snR49snR49 NMD5P46970 1048 aa2.44□□□□□ -2.02
snR49snR49 PCL10P53124 433 aa2.44□□□□□ -2.02
snR49snR49 ATP23P53722 227 aa2.44□□□□□ -2.02
snR49snR49 CPR8P53728 308 aa2.44□□□□□ -2.02
snR49snR49 UFO1Q04511 668 aa2.44□□□□□ -2.02
snR49snR49 RPN7Q06103 429 aaKnown RBP2.44□□□□□ -2.02
snR49snR49 TUP1P16649 713 aa2.43□□□□□ -2.02
snR49snR49 PXL1P36166 706 aa2.43□□□□□ -2.02
snR49snR49 IRC3Q06683 689 aa2.43□□□□□ -2.02
snR49snR49 NEW1Q08972 1196 aaKnown RBP2.43□□□□□ -2.02
snR49snR49 PRS5Q12265 496 aaKnown RBP2.43□□□□□ -2.02
snR49snR49 NTH1P32356 751 aa2.42□□□□□ -2.02
snR49snR49 STO1P34160 861 aaKnown RBP2.42□□□□□ -2.02
snR49snR49 ELF1P36053 145 aa2.42□□□□□ -2.02
snR49snR49 APN2P38207 520 aa2.42□□□□□ -2.02
snR49snR49 COS111P38308 924 aa2.42□□□□□ -2.02
snR49snR49 CCT4P39078 528 aaKnown RBP2.42□□□□□ -2.02
snR49snR49 CAF16P43569 289 aa2.42□□□□□ -2.02
snR49snR49 SET2P46995 733 aaKnown RBP2.42□□□□□ -2.02
snR49snR49 HUL5P53119 910 aa2.42□□□□□ -2.02
snR49snR49 SCW4P53334 386 aaKnown RBP2.42□□□□□ -2.02
snR49snR49 BRE5P53741 515 aaKnown RBP2.42□□□□□ -2.02
snR49snR49 SNP1Q00916 300 aaPredicted RBP2.42□□□□□ -2.02
snR49snR49 YFT2Q06676 274 aa2.42□□□□□ -2.02
snR49snR49 IZH3Q07959 543 aa2.42□□□□□ -2.02
snR49snR49 POM34Q12445 299 aa2.42□□□□□ -2.02
snR49snR49 PMA2P19657 947 aa2.41□□□□□ -2.02
snR49snR49 YPT7P32939 208 aa2.41□□□□□ -2.02
snR49snR49 GDH3P39708 457 aa2.41□□□□□ -2.02
snR49snR49 PCI8P40512 444 aa2.41□□□□□ -2.02
snR49snR49 MAF1P41910 395 aa2.41□□□□□ -2.02
snR49snR49 ERG13P54839 491 aaKnown RBP2.41□□□□□ -2.02
snR49snR49 NOP1P15646 327 aaKnown RBP2.4□□□□□ -2.03
snR49snR49 ASK1P35734 292 aa2.4□□□□□ -2.03
snR49snR49 AKL1P38080 1108 aaKnown RBP2.4□□□□□ -2.03
snR49snR49 HSL7P38274 827 aa2.4□□□□□ -2.03
snR49snR49 MNT3P40549 630 aa2.4□□□□□ -2.03
snR49snR49 MAL11P53048 616 aa2.4□□□□□ -2.03
snR49snR49 LSC1P53598 329 aaKnown RBP2.4□□□□□ -2.03
snR49snR49 RSC9Q03124 581 aa2.4□□□□□ -2.03
snR49snR49 NHX1Q04121 633 aa2.4□□□□□ -2.03
snR49snR49 ISA1Q07821 250 aaPredicted RBP2.4□□□□□ -2.03
snR49snR49 CDC9P04819 755 aa2.39□□□□□ -2.03
snR49snR49 RPL7AP05737 244 aaKnown RBP2.39□□□□□ -2.03
snR49snR49 ERG20P08524 352 aaKnown RBP2.39□□□□□ -2.03
snR49snR49 AQY1P0CD91 305 aa2.39□□□□□ -2.03
snR49snR49 GAL11P19659 1081 aa2.39□□□□□ -2.03
snR49snR49 MRPL9P31334 269 aa2.39□□□□□ -2.03
snR49snR49 GCS1P35197 352 aa2.39□□□□□ -2.03
snR49snR49 SPC97P38863 823 aa2.39□□□□□ -2.03
snR49snR49 SNO3P43544 222 aa2.39□□□□□ -2.03
snR49snR49 SNU71P53207 620 aaKnown RBP2.39□□□□□ -2.03
snR49snR49 DAK1P54838 584 aaKnown RBP2.39□□□□□ -2.03
snR49snR49 TRS23Q03784 219 aa2.39□□□□□ -2.03
snR49snR49 RPL7BQ12213 244 aaKnown RBP2.39□□□□□ -2.03
snR49snR49 MNN4P36044 1178 aa2.38□□□□□ -2.03
snR49snR49 PAM1P37304 830 aaKnown RBP2.38□□□□□ -2.03
snR49snR49 RIM4P38741 713 aa2.38□□□□□ -2.03
snR49snR49 JHD1P40034 492 aa2.38□□□□□ -2.03
snR49snR49 BST1P43571 1029 aa2.38□□□□□ -2.03
snR49snR49 BIT61P47041 543 aa2.38□□□□□ -2.03
snR49snR49 ZPS1Q12512 249 aa2.38□□□□□ -2.03
snR49snR49 HEM1P09950 548 aaPredicted RBP2.37□□□□□ -2.03
snR49snR49 TSR4P25040 408 aa2.37□□□□□ -2.03
snR49snR49 HOG1P32485 435 aa2.37□□□□□ -2.03
snR49snR49 SSZ1P38788 538 aaKnown RBP2.37□□□□□ -2.03
snR49snR49 CPA2P03965 1118 aaKnown RBP2.36□□□□□ -2.03
snR49snR49 SEC15P22224 910 aa2.36□□□□□ -2.03
snR49snR49 KIN82P25341 720 aa2.36□□□□□ -2.03
snR49snR49 RPC34P32910 317 aa2.36□□□□□ -2.03
snR49snR49 PIH1P38768 344 aa2.36□□□□□ -2.03
snR49snR49 YHR202WP38887 602 aa2.36□□□□□ -2.03
snR49snR49 IDP3P53982 420 aaKnown RBP2.36□□□□□ -2.03
snR49snR49 NUP53Q03790 475 aa2.36□□□□□ -2.03
snR49snR49 VHS3Q08438 674 aa2.36□□□□□ -2.03
snR49snR49 MDM12Q92328 271 aa2.36□□□□□ -2.03
snR49snR49 CIT2P08679 460 aa2.35□□□□□ -2.03
snR49snR49 FRS1P15624 595 aaKnown RBP2.35□□□□□ -2.03
snR49snR49 APD1P38281 316 aa2.35□□□□□ -2.03
snR49snR49 EXO1P39875 702 aa2.35□□□□□ -2.03
snR49snR49 THI6P41835 540 aa2.35□□□□□ -2.03
snR49snR49 ATG36P46983 293 aa2.35□□□□□ -2.03
snR49snR49 YJL049WP47048 450 aa2.35□□□□□ -2.03
snR49snR49 YJR039WP47107 1121 aa2.35□□□□□ -2.03
snR49snR49 YNL018CP53976 612 aa2.35□□□□□ -2.03
snR49snR49 CRC1Q12289 327 aa2.35□□□□□ -2.03
snR49snR49 YPR089WO13585 888 aa2.34□□□□□ -2.03
snR49snR49 ERR1P0CX10 437 aa2.34□□□□□ -2.03
snR49snR49 ERR2P0CX11 437 aa2.34□□□□□ -2.03
snR49snR49 URE2P23202 354 aaKnown RBP2.34□□□□□ -2.03
snR49snR49 NUG1P40010 520 aaKnown RBP2.34□□□□□ -2.03
snR49snR49 YJL043WP47053 257 aa2.34□□□□□ -2.03
snR49snR49 YIP4P53093 235 aa2.34□□□□□ -2.03
snR49snR49 DCS2Q12123 353 aa2.34□□□□□ -2.03
snR49snR49 RPS9BP05755 195 aaKnown RBP2.33□□□□□ -2.04
snR49snR49 YAP1P19880 650 aaKnown RBP2.33□□□□□ -2.04
snR49snR49 PET127P32606 800 aa2.33□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 115.1 ms