RNA–Protein interactions for RNA: YPR133C

SPN1, Transcript of Protein involved in RNA polymerase II transcription, yeast

Gene SPN1, Length 1,233 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPN1	YPR133C	MSB1	P21339	1137 aa	Known RBP	4.74	□□□□□ -1.65
SPN1	YPR133C	RSA4	P25382	515 aa	Known RBP	4.74	□□□□□ -1.65
SPN1	YPR133C	RAD27	P26793	382 aa		4.74	□□□□□ -1.65
SPN1	YPR133C	SWE1	P32944	819 aa		4.74	□□□□□ -1.65
SPN1	YPR133C	SAS3	P34218	831 aa		4.74	□□□□□ -1.65
SPN1	YPR133C	YKR073C	P36153	106 aa		4.74	□□□□□ -1.65
SPN1	YPR133C	PCI8	P40512	444 aa		4.74	□□□□□ -1.65
SPN1	YPR133C	SLS1	P42900	643 aa		4.74	□□□□□ -1.65
SPN1	YPR133C	YGL138C	P53122	345 aa		4.74	□□□□□ -1.65
SPN1	YPR133C	YGL081W	P53156	320 aa		4.74	□□□□□ -1.65
SPN1	YPR133C	YGR130C	P53278	816 aa		4.74	□□□□□ -1.65
SPN1	YPR133C	LEE1	Q02799	301 aa	Known RBP	4.74	□□□□□ -1.65
SPN1	YPR133C	RPN4	Q03465	531 aa		4.74	□□□□□ -1.65
SPN1	YPR133C	NSE1	Q07913	336 aa		4.74	□□□□□ -1.65
SPN1	YPR133C	TRP3	P00937	484 aa		4.73	□□□□□ -1.65
SPN1	YPR133C	COX4	P04037	155 aa		4.73	□□□□□ -1.65
SPN1	YPR133C	CLN2	P20438	545 aa		4.73	□□□□□ -1.65
SPN1	YPR133C	PRP22	P24384	1145 aa	Known RBP	4.73	□□□□□ -1.65
SPN1	YPR133C	SGF29	P25554	259 aa		4.73	□□□□□ -1.65
SPN1	YPR133C	HEL1	P36113	551 aa		4.73	□□□□□ -1.65
SPN1	YPR133C	HMT1	P38074	348 aa		4.73	□□□□□ -1.65
SPN1	YPR133C	PCM1	P38628	557 aa	Known RBP	4.73	□□□□□ -1.65
SPN1	YPR133C	NEM1	P38757	446 aa		4.73	□□□□□ -1.65
SPN1	YPR133C	MMM1	P41800	426 aa		4.73	□□□□□ -1.65
SPN1	YPR133C	ZAP1	P47043	880 aa		4.73	□□□□□ -1.65
SPN1	YPR133C	AVT1	P47082	602 aa		4.73	□□□□□ -1.65
SPN1	YPR133C	YGR045C	P53229	120 aa		4.73	□□□□□ -1.65
SPN1	YPR133C	YML053C	Q04978	212 aa		4.73	□□□□□ -1.65
SPN1	YPR133C	ESC8	Q08119	714 aa		4.73	□□□□□ -1.65
SPN1	YPR133C	AVO1	Q08236	1176 aa		4.73	□□□□□ -1.65
SPN1	YPR133C	PLP2	Q12017	286 aa		4.73	□□□□□ -1.65
SPN1	YPR133C	MEX67	Q99257	599 aa	Known RBP	4.73	□□□□□ -1.65
SPN1	YPR133C	MSB2	P32334	1306 aa		4.72	□□□□□ -1.65
SPN1	YPR133C	RPS14A	P06367	137 aa	Known RBP	4.72	□□□□□ -1.65
SPN1	YPR133C	HAP2	P06774	265 aa		4.72	□□□□□ -1.65
SPN1	YPR133C	ATP1	P07251	545 aa	Known RBP	4.72	□□□□□ -1.65
SPN1	YPR133C	VMA4	P22203	233 aa	Known RBP	4.72	□□□□□ -1.65
SPN1	YPR133C	TSR4	P25040	408 aa		4.72	□□□□□ -1.65
SPN1	YPR133C	PGS1	P25578	521 aa		4.72	□□□□□ -1.65
SPN1	YPR133C	ECM32	P32644	1121 aa	Known RBP	4.72	□□□□□ -1.65
SPN1	YPR133C	PRS1	P32895	427 aa	Known RBP	4.72	□□□□□ -1.65
SPN1	YPR133C	TOM20	P35180	183 aa		4.72	□□□□□ -1.65
SPN1	YPR133C	RPS14B	P39516	138 aa	Known RBP	4.72	□□□□□ -1.65
SPN1	YPR133C	MNP1	P53163	194 aa	Predicted RBP	4.72	□□□□□ -1.65
SPN1	YPR133C	RET3	P53600	189 aa		4.72	□□□□□ -1.65
SPN1	YPR133C	ELA1	P53861	379 aa	Predicted RBP	4.72	□□□□□ -1.65
SPN1	YPR133C	SFB2	P53953	876 aa		4.72	□□□□□ -1.65
SPN1	YPR133C	CSM3	Q04659	317 aa		4.72	□□□□□ -1.65
SPN1	YPR133C	CYC7	P00045	113 aa		4.71	□□□□□ -1.66
SPN1	YPR133C	TOM70	P07213	617 aa	Known RBP	4.71	□□□□□ -1.66
SPN1	YPR133C	SRD1	P09007	221 aa		4.71	□□□□□ -1.66
SPN1	YPR133C	MAS1	P10507	462 aa		4.71	□□□□□ -1.66
SPN1	YPR133C	PEX34	P25584	144 aa		4.71	□□□□□ -1.66
SPN1	YPR133C	DPH2	P32461	534 aa		4.71	□□□□□ -1.66
SPN1	YPR133C	BUD6	P41697	788 aa		4.71	□□□□□ -1.66
SPN1	YPR133C	FAA4	P47912	694 aa	Known RBP	4.71	□□□□□ -1.66
SPN1	YPR133C	TAM41	P53230	385 aa		4.71	□□□□□ -1.66
SPN1	YPR133C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.71	□□□□□ -1.66	not detected
SPN1	YPR133C	EEB1	Q02891	456 aa		4.71	□□□□□ -1.66
SPN1	YPR133C	RCR2	Q03446	210 aa	Known RBP	4.71	□□□□□ -1.66
SPN1	YPR133C	NSE5	Q03718	556 aa		4.71	□□□□□ -1.66
SPN1	YPR133C	YHM2	Q04013	314 aa		4.71	□□□□□ -1.66
SPN1	YPR133C	UTP5	Q04177	643 aa	Known RBP	4.71	□□□□□ -1.66
SPN1	YPR133C	DNL4	Q08387	944 aa	Predicted RBP	4.71	□□□□□ -1.66
SPN1	YPR133C	MCD1	Q12158	566 aa		4.71	□□□□□ -1.66
SPN1	YPR133C	RPS9A	O13516	197 aa	Known RBP	4.7	□□□□□ -1.66
SPN1	YPR133C	RPS4A	P0CX35	261 aa	Known RBP	4.7	□□□□□ -1.66
SPN1	YPR133C	RPS4B	P0CX36	261 aa	Known RBP	4.7	□□□□□ -1.66
SPN1	YPR133C	HOM2	P13663	365 aa	Known RBP	4.7	□□□□□ -1.66
SPN1	YPR133C	SEC23	P15303	768 aa	Known RBP	4.7	□□□□□ -1.66
SPN1	YPR133C	PDE1	P22434	369 aa		4.7	□□□□□ -1.66
SPN1	YPR133C	GSY1	P23337	708 aa		4.7	□□□□□ -1.66
SPN1	YPR133C	SWI4	P25302	1093 aa	Known RBP	4.7	□□□□□ -1.66
SPN1	YPR133C	NFS1	P25374	497 aa		4.7	□□□□□ -1.66
SPN1	YPR133C	VPH1	P32563	840 aa	Known RBP	4.7	□□□□□ -1.66
SPN1	YPR133C	BMH2	P34730	273 aa	Known RBP	4.7	□□□□□ -1.66
SPN1	YPR133C	ATG19	P35193	415 aa		4.7	□□□□□ -1.66
SPN1	YPR133C	NNK1	P36003	928 aa		4.7	□□□□□ -1.66
SPN1	YPR133C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.7	□□□□□ -1.66	not detected
SPN1	YPR133C	MRX3	P38172	270 aa		4.7	□□□□□ -1.66
SPN1	YPR133C	YAR028W	P39548	234 aa		4.7	□□□□□ -1.66
SPN1	YPR133C	YER186C	P40101	306 aa		4.7	□□□□□ -1.66
SPN1	YPR133C	MRPS18	P42847	217 aa		4.7	□□□□□ -1.66
SPN1	YPR133C	ALT1	P52893	592 aa		4.7	□□□□□ -1.66
SPN1	YPR133C	YGL140C	P53120	1219 aa		4.7	□□□□□ -1.66
SPN1	YPR133C	ENV11	P53246	860 aa		4.7	□□□□□ -1.66
SPN1	YPR133C	RTT102	P53330	157 aa		4.7	□□□□□ -1.66
SPN1	YPR133C	YNL146W	P53906	100 aa		4.7	□□□□□ -1.66
SPN1	YPR133C	SUB1	P54000	292 aa	Known RBP	4.7	□□□□□ -1.66
SPN1	YPR133C	SLG1	P54867	378 aa		4.7	□□□□□ -1.66
SPN1	YPR133C	POB3	Q04636	552 aa	Known RBP	4.7	□□□□□ -1.66
SPN1	YPR133C	FMP25	Q08023	583 aa		4.7	□□□□□ -1.66
SPN1	YPR133C	SDH5	Q08230	162 aa		4.7	□□□□□ -1.66
SPN1	YPR133C	YOR059C	Q08448	450 aa	Known RBP	4.7	□□□□□ -1.66
SPN1	YPR133C	IES4	Q08561	116 aa		4.7	□□□□□ -1.66
SPN1	YPR133C	ZPS1	Q12512	249 aa		4.7	□□□□□ -1.66
SPN1	YPR133C	TCP1	P12612	559 aa	Known RBP	4.69	□□□□□ -1.66
SPN1	YPR133C	CYC8	P14922	966 aa		4.69	□□□□□ -1.66
SPN1	YPR133C	PRE9	P23638	258 aa	Known RBP	4.69	□□□□□ -1.66
SPN1	YPR133C	LIP5	P32875	414 aa		4.69	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 94.7 ms