RNA–Protein interactions for RNA: YPL104W

MSD1, Transcript of Mitochondrial aspartyl-tRNA synthetase, yeastyeast

Gene MSD1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSD1YPL104W APE3P37302 537 aaKnown RBP3.85□□□□□ -1.79
MSD1YPL104W GIP1P38229 639 aa3.85□□□□□ -1.79
MSD1YPL104W GGA2P38817 585 aaKnown RBP3.85□□□□□ -1.79
MSD1YPL104W AIM46P38885 310 aa3.85□□□□□ -1.79
MSD1YPL104W SET5P38890 526 aaKnown RBP3.85□□□□□ -1.79
MSD1YPL104W EAF5P39995 279 aa3.85□□□□□ -1.79
MSD1YPL104W NPP2P39997 493 aa3.85□□□□□ -1.79
MSD1YPL104W RSM26P47141 266 aa3.85□□□□□ -1.79
MSD1YPL104W SGM1P47166 707 aa3.85□□□□□ -1.79
MSD1YPL104W RPS7BP48164 190 aaKnown RBP3.85□□□□□ -1.79
MSD1YPL104W TPO2P53283 614 aa3.85□□□□□ -1.79
MSD1YPL104W VTC3Q02725 835 aa3.85□□□□□ -1.79
MSD1YPL104W RRB1Q04225 511 aaKnown RBP3.85□□□□□ -1.79
MSD1YPL104W ATG23Q06671 453 aa3.85□□□□□ -1.79
MSD1YPL104W IES4Q08561 116 aa3.85□□□□□ -1.79
MSD1YPL104W TRM11Q12463 433 aa3.85□□□□□ -1.79
MSD1YPL104W RIF1P29539 1916 aa3.85□□□□□ -1.79
MSD1YPL104W ARE1P25628 610 aa3.85□□□□□ -1.79
MSD1YPL104W YUR1P26725 428 aa3.85□□□□□ -1.79
MSD1YPL104W KIP1P28742 1111 aa3.85□□□□□ -1.79
MSD1YPL104W PIN4P34217 668 aaKnown RBP RIP-Chip data3.85□□□□□ -1.79not detected
MSD1YPL104W SMF1P38925 575 aa3.85□□□□□ -1.79
MSD1YPL104W YTA6P40328 754 aa3.85□□□□□ -1.79
MSD1YPL104W PSP2P50109 593 aaKnown RBP3.85□□□□□ -1.79
MSD1YPL104W CUL3P53202 744 aa3.85□□□□□ -1.79
MSD1YPL104W YGR021WP53212 290 aa3.85□□□□□ -1.79
MSD1YPL104W YNL146WP53906 100 aa3.85□□□□□ -1.79
MSD1YPL104W EMG1Q06287 252 aaKnown RBP3.85□□□□□ -1.79
MSD1YPL104W EAF1Q06337 982 aa3.85□□□□□ -1.79
MSD1YPL104W FMP25Q08023 583 aa3.85□□□□□ -1.79
MSD1YPL104W NTG2Q08214 380 aa3.85□□□□□ -1.79
MSD1YPL104W OSW2Q12202 724 aa3.85□□□□□ -1.79
MSD1YPL104W RPS31P05759 152 aaKnown RBP3.84□□□□□ -1.79
MSD1YPL104W SNF1P06782 633 aaKnown RBP3.84□□□□□ -1.79
MSD1YPL104W POX1P13711 748 aa3.84□□□□□ -1.79
MSD1YPL104W GFA1P14742 717 aaKnown RBP3.84□□□□□ -1.79
MSD1YPL104W RPO26P20435 155 aa3.84□□□□□ -1.79
MSD1YPL104W SEC21P32074 935 aaKnown RBP3.84□□□□□ -1.79
MSD1YPL104W SFP1P32432 683 aa3.84□□□□□ -1.79
MSD1YPL104W BYE1P36106 594 aa3.84□□□□□ -1.79
MSD1YPL104W TRZ1P36159 838 aaPredicted RBP3.84□□□□□ -1.79
MSD1YPL104W VBA5P36172 582 aa3.84□□□□□ -1.79
MSD1YPL104W CCT4P39078 528 aaKnown RBP3.84□□□□□ -1.79
MSD1YPL104W ASN1P49089 572 aaKnown RBP3.84□□□□□ -1.79
MSD1YPL104W HSH155P49955 971 aaKnown RBP3.84□□□□□ -1.79
MSD1YPL104W ORC5P50874 479 aa3.84□□□□□ -1.79
MSD1YPL104W SHE10P53075 577 aa3.84□□□□□ -1.79
MSD1YPL104W BTN2P53286 410 aa3.84□□□□□ -1.79
MSD1YPL104W YMR018WQ04364 514 aa3.84□□□□□ -1.79
MSD1YPL104W SIL1Q08199 421 aa3.84□□□□□ -1.79
MSD1YPL104W MET7Q08645 548 aa3.84□□□□□ -1.79
MSD1YPL104W SLX4Q12098 748 aa3.84□□□□□ -1.79
MSD1YPL104W YDR461C-AQ2V2P7 80 aa3.84□□□□□ -1.79
MSD1YPL104W LAA1P39526 2014 aa3.84□□□□□ -1.8
MSD1YPL104W ERG11P10614 530 aa3.83□□□□□ -1.8
MSD1YPL104W KIN82P25341 720 aa3.83□□□□□ -1.8
MSD1YPL104W AGP1P25376 633 aa3.83□□□□□ -1.8
MSD1YPL104W MSH2P25847 964 aa3.83□□□□□ -1.8
MSD1YPL104W PAP1P29468 568 aaKnown RBP3.83□□□□□ -1.8
MSD1YPL104W PYC2P32327 1180 aaKnown RBP3.83□□□□□ -1.8
MSD1YPL104W RME1P32338 300 aaKnown RBP3.83□□□□□ -1.8
MSD1YPL104W DPH2P32461 534 aa3.83□□□□□ -1.8
MSD1YPL104W SWI3P32591 825 aa3.83□□□□□ -1.8
MSD1YPL104W SEC6P32844 805 aa3.83□□□□□ -1.8
MSD1YPL104W CNS1P33313 385 aa3.83□□□□□ -1.8
MSD1YPL104W YKL050CP35736 922 aa3.83□□□□□ -1.8
MSD1YPL104W CAB3P36076 571 aa3.83□□□□□ -1.8
MSD1YPL104W RCK2P38623 610 aa3.83□□□□□ -1.8
MSD1YPL104W SSN3P39073 555 aa3.83□□□□□ -1.8
MSD1YPL104W MXR1P40029 184 aa3.83□□□□□ -1.8
MSD1YPL104W SCD6P45978 349 aaKnown RBP RIP-Chip data3.83□□□□□ -1.8 RIP-Chip
MSD1YPL104W CLA4P48562 842 aa3.83□□□□□ -1.8
MSD1YPL104W RTA1P53047 317 aa3.83□□□□□ -1.8
MSD1YPL104W KAP114P53067 1004 aa3.83□□□□□ -1.8
MSD1YPL104W ERP6P53198 216 aa3.83□□□□□ -1.8
MSD1YPL104W ENV11P53246 860 aa3.83□□□□□ -1.8
MSD1YPL104W CWC22P53333 577 aaKnown RBP3.83□□□□□ -1.8
MSD1YPL104W JJJ1P53863 590 aa3.83□□□□□ -1.8
MSD1YPL104W PEX13P80667 386 aa3.83□□□□□ -1.8
MSD1YPL104W YMR114CQ04471 368 aaKnown RBP3.83□□□□□ -1.8
MSD1YPL104W YLR225CQ05948 407 aaKnown RBP3.83□□□□□ -1.8
MSD1YPL104W HFI1Q12060 488 aa3.83□□□□□ -1.8
MSD1YPL104W HIF1Q12373 385 aa3.83□□□□□ -1.8
MSD1YPL104W CDC33P07260 213 aaKnown RBP3.83□□□□□ -1.8
MSD1YPL104W SBP1P10080 294 aaKnown RBP3.83□□□□□ -1.8
MSD1YPL104W MAS2P11914 482 aa3.83□□□□□ -1.8
MSD1YPL104W PRE10P21242 288 aaKnown RBP RIP-Chip data3.83□□□□□ -1.8not detected
MSD1YPL104W CDC11P32458 415 aa3.83□□□□□ -1.8
MSD1YPL104W SMY2P32909 740 aaKnown RBP3.83□□□□□ -1.8
MSD1YPL104W MOT2P34909 587 aaKnown RBP3.83□□□□□ -1.8
MSD1YPL104W MRP8P35719 219 aa3.83□□□□□ -1.8
MSD1YPL104W BLI1P35727 113 aa3.83□□□□□ -1.8
MSD1YPL104W FLR1P38124 548 aa3.83□□□□□ -1.8
MSD1YPL104W SEA4P38164 1038 aa3.83□□□□□ -1.8
MSD1YPL104W VID24P38263 362 aa3.83□□□□□ -1.8
MSD1YPL104W PEX28P38848 579 aa3.83□□□□□ -1.8
MSD1YPL104W RGA1P39083 1007 aa3.83□□□□□ -1.8
MSD1YPL104W FTR1P40088 404 aa3.83□□□□□ -1.8
MSD1YPL104W IRR1P40541 1150 aa3.83□□□□□ -1.8
MSD1YPL104W CPR7P47103 393 aa3.83□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms