RNA–Protein interactions for RNA: YOR340C

RPA43, Transcript of RNA polymerase I subunit A43, yeast

Gene RPA43, Length 981 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPA43	YOR340C	HSP104	P31539	908 aa	Known RBP	4.23	□□□□□ -1.73
RPA43	YOR340C	NGG1	P32494	702 aa		4.23	□□□□□ -1.73
RPA43	YOR340C	AKL1	P38080	1108 aa	Known RBP	4.23	□□□□□ -1.73
RPA43	YOR340C	SAK1	P38990	1142 aa		4.23	□□□□□ -1.73
RPA43	YOR340C	DOT6	P40059	670 aa	Known RBP	4.23	□□□□□ -1.73
RPA43	YOR340C	YFL052W	P43551	465 aa		4.23	□□□□□ -1.73
RPA43	YOR340C	ZIP2	P53061	704 aa		4.23	□□□□□ -1.73
RPA43	YOR340C	YDR338C	Q05497	695 aa		4.23	□□□□□ -1.73
RPA43	YOR340C	PNS1	Q12412	539 aa		4.23	□□□□□ -1.73
RPA43	YOR340C	PMA1	P05030	918 aa	Known RBP	4.22	□□□□□ -1.73
RPA43	YOR340C	TUB3	P09734	445 aa	Known RBP	4.22	□□□□□ -1.73
RPA43	YOR340C	MIH1	P23748	554 aa		4.22	□□□□□ -1.73
RPA43	YOR340C	DCG1	P32460	244 aa		4.22	□□□□□ -1.73
RPA43	YOR340C	EUG1	P32474	517 aa		4.22	□□□□□ -1.73
RPA43	YOR340C	MSS4	P38994	779 aa		4.22	□□□□□ -1.73
RPA43	YOR340C	TPM2	P40414	161 aa		4.22	□□□□□ -1.73
RPA43	YOR340C	VHR1	P40522	640 aa		4.22	□□□□□ -1.73
RPA43	YOR340C	MTR3	P48240	250 aa	Predicted RBP	4.22	□□□□□ -1.73
RPA43	YOR340C	PHO23	P50947	330 aa		4.22	□□□□□ -1.73
RPA43	YOR340C	NPY1	P53164	384 aa		4.22	□□□□□ -1.73
RPA43	YOR340C	PEX8	P53248	589 aa		4.22	□□□□□ -1.73
RPA43	YOR340C	PAP2	P53632	584 aa	Known RBP	4.22	□□□□□ -1.73
RPA43	YOR340C	ASI2	P53895	289 aa		4.22	□□□□□ -1.73
RPA43	YOR340C	COG6	P53959	839 aa		4.22	□□□□□ -1.73
RPA43	YOR340C	NHX1	Q04121	633 aa		4.22	□□□□□ -1.73
RPA43	YOR340C	TRE2	Q08693	809 aa		4.22	□□□□□ -1.73
RPA43	YOR340C	GIN4	Q12263	1142 aa		4.22	□□□□□ -1.73
RPA43	YOR340C	TRM11	Q12463	433 aa		4.22	□□□□□ -1.73
RPA43	YOR340C	YBR071W	P38243	211 aa		4.21	□□□□□ -1.74
RPA43	YOR340C	CKB2	P38930	258 aa		4.21	□□□□□ -1.74
RPA43	YOR340C	UBC9	P50623	157 aa	Predicted RBP	4.21	□□□□□ -1.74
RPA43	YOR340C	MUS81	Q04149	632 aa	Predicted RBP	4.21	□□□□□ -1.74
RPA43	YOR340C	PMD1	P32634	1753 aa		4.21	□□□□□ -1.74
RPA43	YOR340C	SPT7	P35177	1332 aa		4.21	□□□□□ -1.74
RPA43	YOR340C	HSL7	P38274	827 aa		4.2	□□□□□ -1.74
RPA43	YOR340C	RPP1	P38786	293 aa		4.2	□□□□□ -1.74
RPA43	YOR340C	OAF1	P39720	1047 aa	Predicted RBP	4.2	□□□□□ -1.74
RPA43	YOR340C	NUG1	P40010	520 aa	Known RBP	4.2	□□□□□ -1.74
RPA43	YOR340C	NOP2	P40991	618 aa	Known RBP	4.2	□□□□□ -1.74
RPA43	YOR340C	PFA3	P42836	336 aa		4.2	□□□□□ -1.74
RPA43	YOR340C	SLU7	Q02775	382 aa	Known RBP	4.2	□□□□□ -1.74
RPA43	YOR340C	YTM1	Q12024	460 aa	Predicted RBP	4.2	□□□□□ -1.74
RPA43	YOR340C	NTO1	Q12311	748 aa		4.2	□□□□□ -1.74
RPA43	YOR340C	TOP1	P04786	769 aa		4.19	□□□□□ -1.74
RPA43	YOR340C	SEC6	P32844	805 aa		4.19	□□□□□ -1.74
RPA43	YOR340C	TRM2	P33753	639 aa		4.19	□□□□□ -1.74
RPA43	YOR340C	CTF13	P35203	478 aa		4.19	□□□□□ -1.74
RPA43	YOR340C	GZF3	P42944	551 aa	Known RBP	4.19	□□□□□ -1.74
RPA43	YOR340C	BNA2	P47125	453 aa		4.19	□□□□□ -1.74
RPA43	YOR340C	YGR153W	P48238	217 aa		4.19	□□□□□ -1.74
RPA43	YOR340C	PEX14	P53112	341 aa		4.19	□□□□□ -1.74
RPA43	YOR340C	YBP2	P53169	641 aa		4.19	□□□□□ -1.74
RPA43	YOR340C	RIX7	Q07844	837 aa	Known RBP	4.19	□□□□□ -1.74
RPA43	YOR340C	AIM39	Q08223	395 aa		4.19	□□□□□ -1.74
RPA43	YOR340C	PUS9	Q12069	462 aa		4.19	□□□□□ -1.74
RPA43	YOR340C	LAS17	Q12446	633 aa		4.19	□□□□□ -1.74
RPA43	YOR340C	TMA7	Q3E764	64 aa	Known RBP	4.19	□□□□□ -1.74
RPA43	YOR340C	YLR415C	O13578	112 aa		4.18	□□□□□ -1.74
RPA43	YOR340C	PRP4	P20053	465 aa	Known RBP	4.18	□□□□□ -1.74
RPA43	YOR340C	HRR25	P29295	494 aa	Known RBP	4.18	□□□□□ -1.74
RPA43	YOR340C	PMI40	P29952	429 aa	Known RBP	4.18	□□□□□ -1.74
RPA43	YOR340C	CCR4	P31384	837 aa	Known RBP	4.18	□□□□□ -1.74
RPA43	YOR340C	TFC4	P33339	1025 aa		4.18	□□□□□ -1.74
RPA43	YOR340C	YPT53	P36019	220 aa		4.18	□□□□□ -1.74
RPA43	YOR340C	YKR051W	P36142	418 aa		4.18	□□□□□ -1.74
RPA43	YOR340C	EAF6	P47128	113 aa		4.18	□□□□□ -1.74
RPA43	YOR340C	SUN4	P53616	420 aa		4.18	□□□□□ -1.74
RPA43	YOR340C	CTF4	Q01454	927 aa		4.18	□□□□□ -1.74
RPA43	YOR340C	NRG1	Q03125	231 aa		4.18	□□□□□ -1.74
RPA43	YOR340C	SND1	Q04007	877 aa		4.18	□□□□□ -1.74
RPA43	YOR340C	RPN7	Q06103	429 aa	Known RBP	4.18	□□□□□ -1.74
RPA43	YOR340C	ALE1	Q08548	619 aa		4.18	□□□□□ -1.74
RPA43	YOR340C	NYV1	Q12255	253 aa		4.18	□□□□□ -1.74
RPA43	YOR340C	YLR149C	Q99296	730 aa		4.18	□□□□□ -1.74
RPA43	YOR340C	Q0142	Q9ZZW4	58 aa		4.18	□□□□□ -1.74
RPA43	YOR340C	FAS2	P19097	1887 aa	Known RBP	4.18	□□□□□ -1.74
RPA43	YOR340C	TRP4	P07285	380 aa	Predicted RBP	4.17	□□□□□ -1.74
RPA43	YOR340C	MET3	P08536	511 aa		4.17	□□□□□ -1.74
RPA43	YOR340C	EFT1	P32324	842 aa	Known RBP	4.17	□□□□□ -1.74
RPA43	YOR340C	PLC1	P32383	869 aa		4.17	□□□□□ -1.74
RPA43	YOR340C	TDA3	P38758	523 aa		4.17	□□□□□ -1.74
RPA43	YOR340C	FKH2	P41813	862 aa		4.17	□□□□□ -1.74
RPA43	YOR340C	DUG1	P43616	481 aa	Known RBP	4.17	□□□□□ -1.74
RPA43	YOR340C	RET2	P43621	546 aa		4.17	□□□□□ -1.74
RPA43	YOR340C	MNN11	P46985	422 aa	Known RBP	4.17	□□□□□ -1.74
RPA43	YOR340C	ORC4	P54791	529 aa		4.17	□□□□□ -1.74
RPA43	YOR340C	ASM4	Q05166	528 aa		4.17	□□□□□ -1.74
RPA43	YOR340C	THI22	Q06490	572 aa		4.17	□□□□□ -1.74
RPA43	YOR340C	BUG1	Q12191	341 aa		4.17	□□□□□ -1.74
RPA43	YOR340C	AEP2	P22136	580 aa		4.16	□□□□□ -1.74
RPA43	YOR340C	PRD1	P25375	712 aa		4.16	□□□□□ -1.74
RPA43	YOR340C	KCC4	P25389	1037 aa		4.16	□□□□□ -1.74
RPA43	YOR340C	DAL3	P32459	195 aa		4.16	□□□□□ -1.74
RPA43	YOR340C	DEF1	P35732	738 aa	Known RBP	4.16	□□□□□ -1.74
RPA43	YOR340C	SIC1	P38634	284 aa		4.16	□□□□□ -1.74
RPA43	YOR340C	AIM21	P40563	679 aa		4.16	□□□□□ -1.74
RPA43	YOR340C	BUD27	P43573	796 aa	Known RBP RIP-Chip data	4.16	□□□□□ -1.74	not detected
RPA43	YOR340C	NIT2	P47016	307 aa		4.16	□□□□□ -1.74
RPA43	YOR340C	MPP10	P47083	593 aa	Known RBP	4.16	□□□□□ -1.74
RPA43	YOR340C	MSE1	P48525	536 aa		4.16	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms