RNA–Protein interactions for RNA: YOL090W

MSH2, Transcript of Protein that binds to DNA mismatches, yeastyeast

Gene MSH2, Length 2,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH2YOL090W NPP2P39997 493 aa3.45□□□□□ -1.86
MSH2YOL090W YTA6P40328 754 aa3.45□□□□□ -1.86
MSH2YOL090W MFB1Q04922 465 aa3.45□□□□□ -1.86
MSH2YOL090W IML1P47170 1584 aa3.45□□□□□ -1.86
MSH2YOL090W MET17P06106 444 aa3.45□□□□□ -1.86
MSH2YOL090W OLE1P21147 510 aaKnown RBP3.45□□□□□ -1.86
MSH2YOL090W PHO3P24031 467 aa3.45□□□□□ -1.86
MSH2YOL090W CDC48P25694 835 aaKnown RBP3.45□□□□□ -1.86
MSH2YOL090W YKL077WP36081 392 aa3.45□□□□□ -1.86
MSH2YOL090W SET3P36124 751 aa3.45□□□□□ -1.86
MSH2YOL090W ESL2P36168 1195 aa3.45□□□□□ -1.86
MSH2YOL090W LSB6P42951 607 aa3.45□□□□□ -1.86
MSH2YOL090W CIT3P43635 486 aa3.45□□□□□ -1.86
MSH2YOL090W YJL055WP47044 245 aa3.45□□□□□ -1.86
MSH2YOL090W DAM1P53267 343 aa3.45□□□□□ -1.86
MSH2YOL090W HRQ1Q05549 1077 aa3.45□□□□□ -1.86
MSH2YOL090W CWC2Q12046 339 aaPredicted RBP3.45□□□□□ -1.86
MSH2YOL090W SMF3Q12078 473 aaPredicted RBP3.45□□□□□ -1.86
MSH2YOL090W CEX1Q12453 761 aa3.45□□□□□ -1.86
MSH2YOL090W YBT1P32386 1661 aa3.44□□□□□ -1.86
MSH2YOL090W BNR1P40450 1375 aa3.44□□□□□ -1.86
MSH2YOL090W QCR6P00127 147 aa3.44□□□□□ -1.86
MSH2YOL090W CPA2P03965 1118 aaKnown RBP3.44□□□□□ -1.86
MSH2YOL090W UBC1P21734 215 aaKnown RBP3.44□□□□□ -1.86
MSH2YOL090W PRK1P40494 810 aa3.44□□□□□ -1.86
MSH2YOL090W CBK1P53894 756 aa3.44□□□□□ -1.86
MSH2YOL090W MRPL13Q02204 264 aa3.44□□□□□ -1.86
MSH2YOL090W PRP42Q03776 544 aaKnown RBP3.44□□□□□ -1.86
MSH2YOL090W RKM2Q03942 479 aa3.44□□□□□ -1.86
MSH2YOL090W ADY3Q07732 790 aa3.44□□□□□ -1.86
MSH2YOL090W RRP36Q12481 300 aaPredicted RBP3.44□□□□□ -1.86
MSH2YOL090W KCS1Q12494 1050 aa3.44□□□□□ -1.86
MSH2YOL090W YRF1-2P40105 1681 aa3.44□□□□□ -1.86
MSH2YOL090W SWI6P09959 803 aa3.44□□□□□ -1.86
MSH2YOL090W YCL002CP25565 263 aa3.44□□□□□ -1.86
MSH2YOL090W SEC65P29478 273 aa3.44□□□□□ -1.86
MSH2YOL090W KNS1P32350 737 aaPredicted RBP3.44□□□□□ -1.86
MSH2YOL090W YKR051WP36142 418 aa3.44□□□□□ -1.86
MSH2YOL090W LYS14P40971 790 aa3.44□□□□□ -1.86
MSH2YOL090W IRC5P43610 853 aa3.44□□□□□ -1.86
MSH2YOL090W ZIP2P53061 704 aa3.44□□□□□ -1.86
MSH2YOL090W ZDS2P54786 942 aa3.44□□□□□ -1.86
MSH2YOL090W PTA1Q01329 785 aaPredicted RBP3.44□□□□□ -1.86
MSH2YOL090W GLN4P13188 809 aaKnown RBP3.43□□□□□ -1.86
MSH2YOL090W CKA1P15790 372 aa3.43□□□□□ -1.86
MSH2YOL090W CYS3P31373 394 aaKnown RBP3.43□□□□□ -1.86
MSH2YOL090W NGG1P32494 702 aa3.43□□□□□ -1.86
MSH2YOL090W AHP1P38013 176 aaKnown RBP3.43□□□□□ -1.86
MSH2YOL090W SWD1P39706 426 aa3.43□□□□□ -1.86
MSH2YOL090W SPO74P45819 413 aa3.43□□□□□ -1.86
MSH2YOL090W BNA2P47125 453 aa3.43□□□□□ -1.86
MSH2YOL090W CUZ1P53899 274 aa3.43□□□□□ -1.86
MSH2YOL090W LRS4Q04087 347 aaKnown RBP3.43□□□□□ -1.86
MSH2YOL090W MCH5Q08777 521 aa3.43□□□□□ -1.86
MSH2YOL090W REX3Q12090 404 aa3.43□□□□□ -1.86
MSH2YOL090W PTC5Q12511 572 aa3.43□□□□□ -1.86
MSH2YOL090W Q0142Q9ZZW4 58 aa3.43□□□□□ -1.86
MSH2YOL090W LEU2P04173 364 aaPredicted RBP3.43□□□□□ -1.86
MSH2YOL090W ROX1P25042 368 aa3.43□□□□□ -1.86
MSH2YOL090W SGF29P25554 259 aa3.43□□□□□ -1.86
MSH2YOL090W YBR138CP38277 524 aa3.43□□□□□ -1.86
MSH2YOL090W VPS41P38959 992 aa3.43□□□□□ -1.86
MSH2YOL090W SCS2P40075 244 aaKnown RBP3.43□□□□□ -1.86
MSH2YOL090W CTF18P49956 741 aa3.43□□□□□ -1.86
MSH2YOL090W GUP1P53154 560 aa3.43□□□□□ -1.86
MSH2YOL090W EAR1Q03212 550 aa3.43□□□□□ -1.86
MSH2YOL090W YDR514CQ04408 483 aa3.43□□□□□ -1.86
MSH2YOL090W YIG1Q08956 461 aa3.43□□□□□ -1.86
MSH2YOL090W YBR182C-AQ8TGU6 64 aa3.43□□□□□ -1.86
MSH2YOL090W FUM1P08417 488 aaKnown RBP3.42□□□□□ -1.86
MSH2YOL090W NUC1P08466 329 aa3.42□□□□□ -1.86
MSH2YOL090W STT3P39007 718 aaKnown RBP3.42□□□□□ -1.86
MSH2YOL090W YFL054CP43549 646 aa3.42□□□□□ -1.86
MSH2YOL090W YJL181WP46987 611 aa3.42□□□□□ -1.86
MSH2YOL090W YKE2P52553 114 aa3.42□□□□□ -1.86
MSH2YOL090W HST3P53687 447 aa3.42□□□□□ -1.86
MSH2YOL090W ARP4P80428 489 aa3.42□□□□□ -1.86
MSH2YOL090W TY1A-DR2Q03964 440 aaKnown RBP3.42□□□□□ -1.86
MSH2YOL090W TY1A-MR1Q04215 440 aa3.42□□□□□ -1.86
MSH2YOL090W SNO4Q04902 237 aa3.42□□□□□ -1.86
MSH2YOL090W HSP33Q08914 237 aaKnown RBP3.42□□□□□ -1.86
MSH2YOL090W HSP32Q08992 237 aa3.42□□□□□ -1.86
MSH2YOL090W RTK1Q12100 620 aaPredicted RBP3.42□□□□□ -1.86
MSH2YOL090W CAT8P39113 1433 aa3.42□□□□□ -1.86
MSH2YOL090W MCM3P24279 971 aaKnown RBP3.42□□□□□ -1.86
MSH2YOL090W SEC21P32074 935 aaKnown RBP3.42□□□□□ -1.86
MSH2YOL090W HXT4P32467 576 aa3.42□□□□□ -1.86
MSH2YOL090W SLA2P33338 968 aa3.42□□□□□ -1.86
MSH2YOL090W YLF2P38746 405 aa3.42□□□□□ -1.86
MSH2YOL090W YJL068CP40363 299 aa3.42□□□□□ -1.86
MSH2YOL090W SEC27P41811 889 aaKnown RBP3.42□□□□□ -1.86
MSH2YOL090W CCM1P48237 864 aaPredicted RBP3.42□□□□□ -1.86
MSH2YOL090W LSC2P53312 427 aa3.42□□□□□ -1.86
MSH2YOL090W NCS2P53923 493 aaPredicted RBP3.42□□□□□ -1.86
MSH2YOL090W CIR2Q08822 631 aa3.42□□□□□ -1.86
MSH2YOL090W KEL3Q08979 651 aaPredicted RBP3.42□□□□□ -1.86
MSH2YOL090W YDL176WQ12027 708 aa3.42□□□□□ -1.86
MSH2YOL090W SEC7P11075 2009 aaKnown RBP3.42□□□□□ -1.86
MSH2YOL090W PMS1P14242 873 aa3.41□□□□□ -1.86
MSH2YOL090W REC107P21651 314 aa3.41□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 22.3 ms