RNA–Protein interactions for RNA: YNL257C

SIP3, Transcript of Transcription cofactor, yeast

Gene SIP3, Length 3,690 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIP3	YNL257C	RPS17A	P02407	136 aa	Known RBP	3.13	□□□□□ -1.91
SIP3	YNL257C	RPS17B	P14127	136 aa	Known RBP	3.13	□□□□□ -1.91
SIP3	YNL257C	MTC7	P32633	139 aa		3.13	□□□□□ -1.91
SIP3	YNL257C	RIM4	P38741	713 aa		3.13	□□□□□ -1.91
SIP3	YNL257C	YIL092W	P40497	633 aa		3.13	□□□□□ -1.91
SIP3	YNL257C	GTF1	P53260	183 aa	Predicted RBP	3.13	□□□□□ -1.91
SIP3	YNL257C	DIN7	Q12086	430 aa		3.13	□□□□□ -1.91
SIP3	YNL257C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	3.13	□□□□□ -1.91	not detected
SIP3	YNL257C	SRP68	P38687	599 aa	Known RBP	3.13	□□□□□ -1.91
SIP3	YNL257C	VPS62	P53285	467 aa		3.13	□□□□□ -1.91
SIP3	YNL257C	MTD1	Q02046	320 aa	Known RBP	3.13	□□□□□ -1.91
SIP3	YNL257C	YML131W	Q03102	365 aa		3.13	□□□□□ -1.91
SIP3	YNL257C	RGC1	Q06108	1083 aa	Known RBP	3.13	□□□□□ -1.91
SIP3	YNL257C	YPL277C	Q08989	487 aa		3.13	□□□□□ -1.91
SIP3	YNL257C	RPO31	P04051	1460 aa		3.12	□□□□□ -1.91
SIP3	YNL257C	GDB1	Q06625	1536 aa		3.12	□□□□□ -1.91
SIP3	YNL257C	HIS5	P07172	385 aa		3.12	□□□□□ -1.91
SIP3	YNL257C	ADH4	P10127	382 aa		3.12	□□□□□ -1.91
SIP3	YNL257C	SEC18	P18759	758 aa	Known RBP	3.12	□□□□□ -1.91
SIP3	YNL257C	ERG6	P25087	383 aa	Known RBP	3.12	□□□□□ -1.91
SIP3	YNL257C	PET309	P32522	965 aa	Predicted RBP	3.12	□□□□□ -1.91
SIP3	YNL257C	YHR112C	P38716	378 aa		3.12	□□□□□ -1.91
SIP3	YNL257C	PSP2	P50109	593 aa	Known RBP	3.12	□□□□□ -1.91
SIP3	YNL257C	ARG5,6	Q01217	863 aa		3.12	□□□□□ -1.91
SIP3	YNL257C	TRS130	Q03660	1102 aa		3.12	□□□□□ -1.91
SIP3	YNL257C	SHM2	P37291	469 aa	Known RBP	3.12	□□□□□ -1.91
SIP3	YNL257C	SPC72	P39723	622 aa		3.12	□□□□□ -1.91
SIP3	YNL257C	YNL195C	P40168	261 aa		3.12	□□□□□ -1.91
SIP3	YNL257C	BUD8	P41698	603 aa		3.12	□□□□□ -1.91
SIP3	YNL257C	MTR3	P48240	250 aa	Predicted RBP	3.12	□□□□□ -1.91
SIP3	YNL257C	NUR1	Q12066	484 aa		3.12	□□□□□ -1.91
SIP3	YNL257C	DNF2	Q12675	1612 aa		3.12	□□□□□ -1.91
SIP3	YNL257C	YEL076C-A	P0CX16	216 aa		3.12	□□□□□ -1.91
SIP3	YNL257C	YLR464W	P0CX17	216 aa		3.12	□□□□□ -1.91
SIP3	YNL257C	LAM1	P38851	1228 aa		3.12	□□□□□ -1.91
SIP3	YNL257C	YEL076C	P39971	216 aa		3.12	□□□□□ -1.91
SIP3	YNL257C	ASK10	P48361	1146 aa		3.12	□□□□□ -1.91
SIP3	YNL257C	VPS36	Q06696	566 aa		3.12	□□□□□ -1.91
SIP3	YNL257C	CDS1	P38221	457 aa		3.11	□□□□□ -1.91
SIP3	YNL257C	OPY1	P38271	328 aa		3.11	□□□□□ -1.91
SIP3	YNL257C	MEF2	P39677	819 aa		3.11	□□□□□ -1.91
SIP3	YNL257C	IMA5	P40884	581 aa		3.11	□□□□□ -1.91
SIP3	YNL257C	CCT8	P47079	568 aa	Known RBP	3.11	□□□□□ -1.91
SIP3	YNL257C	TEP1	P53916	434 aa		3.11	□□□□□ -1.91
SIP3	YNL257C	ERG5	P54781	538 aa		3.11	□□□□□ -1.91
SIP3	YNL257C	GPD1	Q00055	391 aa	Known RBP	3.11	□□□□□ -1.91
SIP3	YNL257C	YDR132C	Q03900	495 aa		3.11	□□□□□ -1.91
SIP3	YNL257C	SGD1	Q06132	899 aa		3.11	□□□□□ -1.91
SIP3	YNL257C	LAS17	Q12446	633 aa		3.11	□□□□□ -1.91
SIP3	YNL257C	EMC1	P25574	760 aa		3.11	□□□□□ -1.91
SIP3	YNL257C	DPB3	P27344	201 aa		3.11	□□□□□ -1.91
SIP3	YNL257C	SIC1	P38634	284 aa		3.11	□□□□□ -1.91
SIP3	YNL257C	STL1	P39932	569 aa		3.11	□□□□□ -1.91
SIP3	YNL257C	SAP185	P40856	1058 aa		3.11	□□□□□ -1.91
SIP3	YNL257C	BNA1	P47096	177 aa		3.11	□□□□□ -1.91
SIP3	YNL257C	MNT2	P53059	558 aa		3.11	□□□□□ -1.91
SIP3	YNL257C	YMR210W	Q03649	449 aa		3.11	□□□□□ -1.91
SIP3	YNL257C	ISA1	Q07821	250 aa	Predicted RBP	3.11	□□□□□ -1.91
SIP3	YNL257C	GFA1	P14742	717 aa	Known RBP	3.11	□□□□□ -1.91
SIP3	YNL257C	PHO3	P24031	467 aa		3.11	□□□□□ -1.91
SIP3	YNL257C	SED4	P25365	1065 aa		3.11	□□□□□ -1.91
SIP3	YNL257C	APN2	P38207	520 aa		3.11	□□□□□ -1.91
SIP3	YNL257C	PZF1	P39933	429 aa		3.11	□□□□□ -1.91
SIP3	YNL257C	MAD3	P47074	515 aa		3.11	□□□□□ -1.91
SIP3	YNL257C	EIS1	Q05050	843 aa	Known RBP	3.11	□□□□□ -1.91
SIP3	YNL257C	TFC6	Q06339	672 aa		3.11	□□□□□ -1.91
SIP3	YNL257C	SSP2	Q08646	371 aa		3.11	□□□□□ -1.91
SIP3	YNL257C	KCS1	Q12494	1050 aa		3.11	□□□□□ -1.91
SIP3	YNL257C	DUR1,2	P32528	1835 aa	Known RBP	3.1	□□□□□ -1.91
SIP3	YNL257C	TY3B-I	Q7LHG5	1498 aa	Known RBP	3.1	□□□□□ -1.91
SIP3	YNL257C	NUP192	P47054	1683 aa		3.1	□□□□□ -1.91
SIP3	YNL257C	YLR415C	O13578	112 aa		3.1	□□□□□ -1.91
SIP3	YNL257C	MSM1	P22438	575 aa		3.1	□□□□□ -1.91
SIP3	YNL257C	MRS6	P32864	603 aa	Known RBP	3.1	□□□□□ -1.91
SIP3	YNL257C	SCS2	P40075	244 aa	Known RBP	3.1	□□□□□ -1.91
SIP3	YNL257C	PRP31	P49704	494 aa	Predicted RBP	3.1	□□□□□ -1.91
SIP3	YNL257C	PAP2	P53632	584 aa	Known RBP	3.1	□□□□□ -1.91
SIP3	YNL257C	ARC35	P53731	342 aa	Known RBP	3.1	□□□□□ -1.91
SIP3	YNL257C	TMA64	Q04600	565 aa	Known RBP	3.1	□□□□□ -1.91
SIP3	YNL257C	PSR2	Q07949	397 aa		3.1	□□□□□ -1.91
SIP3	YNL257C	ARP7	Q12406	477 aa		3.1	□□□□□ -1.91
SIP3	YNL257C	BEM3	P32873	1128 aa		3.1	□□□□□ -1.91
SIP3	YNL257C	SWD1	P39706	426 aa		3.1	□□□□□ -1.91
SIP3	YNL257C	YNR071C	P53757	342 aa		3.1	□□□□□ -1.91
SIP3	YNL257C	ORC4	P54791	529 aa		3.1	□□□□□ -1.91
SIP3	YNL257C	YAP6	Q03935	383 aa		3.1	□□□□□ -1.91
SIP3	YNL257C	HIM1	Q06674	414 aa		3.1	□□□□□ -1.91
SIP3	YNL257C	DNF1	P32660	1571 aa		3.1	□□□□□ -1.91
SIP3	YNL257C	TOP2	P06786	1428 aa	Known RBP	3.09	□□□□□ -1.91
SIP3	YNL257C	FRS1	P15624	595 aa	Known RBP	3.09	□□□□□ -1.91
SIP3	YNL257C	PRE4	P30657	266 aa		3.09	□□□□□ -1.91
SIP3	YNL257C	PTH2	P34222	208 aa		3.09	□□□□□ -1.91
SIP3	YNL257C	LRG1	P35688	1017 aa		3.09	□□□□□ -1.91
SIP3	YNL257C	YDL183C	P48569	320 aa		3.09	□□□□□ -1.91
SIP3	YNL257C	MED7	Q08278	222 aa		3.09	□□□□□ -1.91
SIP3	YNL257C	VHS3	Q08438	674 aa		3.09	□□□□□ -1.91
SIP3	YNL257C	NPC2	Q12408	173 aa		3.09	□□□□□ -1.91
SIP3	YNL257C	YOL087C	Q99247	1116 aa		3.09	□□□□□ -1.91
SIP3	YNL257C	HRP1	Q99383	534 aa	Known RBP	3.09	□□□□□ -1.91
SIP3	YNL257C	BUD4	P47136	1447 aa		3.09	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 20.2 ms