RNA–Protein interactions for RNA: YNL223W

ATG4, Transcript of Conserved cysteine protease required for autophagy, yeastyeast

Gene ATG4, Length 1,485 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG4YNL223W SAT4P25333 603 aaKnown RBP6.24□□□□□ -1.41
ATG4YNL223W RSA4P25382 515 aaKnown RBP6.24□□□□□ -1.41
ATG4YNL223W PAH1P32567 862 aa6.24□□□□□ -1.41
ATG4YNL223W UIP5P36137 443 aa6.24□□□□□ -1.41
ATG4YNL223W YBL036CP38197 257 aa6.24□□□□□ -1.41
ATG4YNL223W TIF5P38431 405 aaKnown RBP6.24□□□□□ -1.41
ATG4YNL223W APM2P38700 605 aa6.24□□□□□ -1.41
ATG4YNL223W SAP1P39955 897 aaKnown RBP6.24□□□□□ -1.41
ATG4YNL223W YJR054WP47114 497 aa6.24□□□□□ -1.41
ATG4YNL223W NOP13P53883 403 aaKnown RBP RIP-Chip data6.24□□□□□ -1.41not detected
ATG4YNL223W UTP6Q02354 440 aaKnown RBP6.24□□□□□ -1.41
ATG4YNL223W SXM1Q04175 944 aaKnown RBP6.24□□□□□ -1.41
ATG4YNL223W IVY1Q04934 453 aa6.24□□□□□ -1.41
ATG4YNL223W DNL4Q08387 944 aaPredicted RBP6.24□□□□□ -1.41
ATG4YNL223W YDR524C-BQ3E6R4 66 aa6.24□□□□□ -1.41
ATG4YNL223W JIP3O13555 125 aa6.23□□□□□ -1.41
ATG4YNL223W RAD1P06777 1100 aa6.23□□□□□ -1.41
ATG4YNL223W RAD10P06838 210 aa6.23□□□□□ -1.41
ATG4YNL223W TUB3P09734 445 aaKnown RBP6.23□□□□□ -1.41
ATG4YNL223W PDR1P12383 1068 aa6.23□□□□□ -1.41
ATG4YNL223W TRX1P22217 103 aaKnown RBP6.23□□□□□ -1.41
ATG4YNL223W PUF4P25339 888 aaKnown RBP RIP-Chip data6.23□□□□□ -1.41not detected
ATG4YNL223W FUB1P25659 250 aa6.23□□□□□ -1.41
ATG4YNL223W SPT5P27692 1063 aaKnown RBP6.23□□□□□ -1.41
ATG4YNL223W CAB3P36076 571 aa6.23□□□□□ -1.41
ATG4YNL223W TBS1P38114 1094 aa6.23□□□□□ -1.41
ATG4YNL223W PBP2P38151 413 aaKnown RBP RIP-Chip data6.23□□□□□ -1.41not detected
ATG4YNL223W ECM2P38241 364 aaKnown RBP6.23□□□□□ -1.41
ATG4YNL223W MSG5P38590 489 aa6.23□□□□□ -1.41
ATG4YNL223W PCM1P38628 557 aaKnown RBP6.23□□□□□ -1.41
ATG4YNL223W SOL3P38858 249 aa6.23□□□□□ -1.41
ATG4YNL223W DSE1P40077 573 aa6.23□□□□□ -1.41
ATG4YNL223W CTK3P46963 296 aaPredicted RBP6.23□□□□□ -1.41
ATG4YNL223W INP52P50942 1183 aa6.23□□□□□ -1.41
ATG4YNL223W ALT2P52892 507 aa6.23□□□□□ -1.41
ATG4YNL223W RPL22BP56628 122 aaKnown RBP6.23□□□□□ -1.41
ATG4YNL223W ARO80Q04052 950 aa6.23□□□□□ -1.41
ATG4YNL223W SFH1Q06168 426 aa6.23□□□□□ -1.41
ATG4YNL223W DIS3Q08162 1001 aaKnown RBP6.23□□□□□ -1.41
ATG4YNL223W VPS54Q12071 889 aa6.23□□□□□ -1.41
ATG4YNL223W BMT6Q12291 365 aa6.23□□□□□ -1.41
ATG4YNL223W EMP46Q12396 444 aa6.23□□□□□ -1.41
ATG4YNL223W HEM1P09950 548 aaPredicted RBP6.22□□□□□ -1.41
ATG4YNL223W PUT4P15380 627 aa6.22□□□□□ -1.41
ATG4YNL223W MSH1P25846 959 aa6.22□□□□□ -1.41
ATG4YNL223W POT1P27796 417 aaKnown RBP RIP-Chip data6.22□□□□□ -1.41not detected
ATG4YNL223W SEC1P30619 724 aaKnown RBP6.22□□□□□ -1.41
ATG4YNL223W PLC1P32383 869 aa6.22□□□□□ -1.41
ATG4YNL223W CSE2P33308 149 aa6.22□□□□□ -1.41
ATG4YNL223W HEL1P36113 551 aa6.22□□□□□ -1.41
ATG4YNL223W ABZ1P37254 787 aaPredicted RBP6.22□□□□□ -1.41
ATG4YNL223W LDH1P38139 375 aa6.22□□□□□ -1.41
ATG4YNL223W PCA1P38360 1216 aa6.22□□□□□ -1.41
ATG4YNL223W YMR134WP40207 237 aa6.22□□□□□ -1.41
ATG4YNL223W RPT2P40327 437 aaKnown RBP6.22□□□□□ -1.41
ATG4YNL223W YJR039WP47107 1121 aa6.22□□□□□ -1.41
ATG4YNL223W MUB1Q03162 620 aa6.22□□□□□ -1.41
ATG4YNL223W TIF35Q04067 274 aaKnown RBP6.22□□□□□ -1.41
ATG4YNL223W UTP13Q05946 817 aaKnown RBP6.22□□□□□ -1.41
ATG4YNL223W STE23Q06010 1027 aa6.22□□□□□ -1.41
ATG4YNL223W KAP95Q06142 861 aaKnown RBP6.22□□□□□ -1.41
ATG4YNL223W AIM39Q08223 395 aa6.22□□□□□ -1.41
ATG4YNL223W TPK1P06244 397 aa6.22□□□□□ -1.41
ATG4YNL223W PEP5P12868 1029 aa6.22□□□□□ -1.41
ATG4YNL223W AEP2P22136 580 aa6.22□□□□□ -1.41
ATG4YNL223W GPI10P30777 616 aa6.22□□□□□ -1.41
ATG4YNL223W FRE1P32791 686 aa6.22□□□□□ -1.41
ATG4YNL223W KDX1P36005 433 aa6.22□□□□□ -1.41
ATG4YNL223W SWC5P38326 303 aa6.22□□□□□ -1.41
ATG4YNL223W VHC1P38329 1120 aa6.22□□□□□ -1.41
ATG4YNL223W KHA1P40309 873 aa6.22□□□□□ -1.41
ATG4YNL223W ESL1P40456 1118 aa6.22□□□□□ -1.41
ATG4YNL223W TMA108P40462 946 aa6.22□□□□□ -1.41
ATG4YNL223W POL31P46957 487 aa6.22□□□□□ -1.41
ATG4YNL223W ATG36P46983 293 aa6.22□□□□□ -1.41
ATG4YNL223W YML6P51998 286 aa6.22□□□□□ -1.41
ATG4YNL223W SLG1P54867 378 aa6.22□□□□□ -1.41
ATG4YNL223W STP1Q00947 519 aa6.22□□□□□ -1.41
ATG4YNL223W MDM38Q08179 573 aa6.22□□□□□ -1.41
ATG4YNL223W ACM1Q08981 209 aa6.22□□□□□ -1.41
ATG4YNL223W YOR223WQ12015 292 aa6.22□□□□□ -1.41
ATG4YNL223W YDR018CQ12185 396 aa6.22□□□□□ -1.41
ATG4YNL223W YML002WP0CF17 737 aa6.21□□□□□ -1.42
ATG4YNL223W TIF1P10081 395 aaKnown RBP6.21□□□□□ -1.42
ATG4YNL223W PYC1P11154 1178 aaKnown RBP6.21□□□□□ -1.42
ATG4YNL223W VPS3P23643 1011 aa6.21□□□□□ -1.42
ATG4YNL223W GAC1P28006 793 aa6.21□□□□□ -1.42
ATG4YNL223W BIO2P32451 375 aa6.21□□□□□ -1.42
ATG4YNL223W RGD1P38339 666 aa6.21□□□□□ -1.42
ATG4YNL223W ARG2P40360 574 aa6.21□□□□□ -1.42
ATG4YNL223W SAP185P40856 1058 aa6.21□□□□□ -1.42
ATG4YNL223W TFG1P41895 735 aaPredicted RBP6.21□□□□□ -1.42
ATG4YNL223W YJL045WP47052 634 aa6.21□□□□□ -1.42
ATG4YNL223W YJR079WP47126 109 aa6.21□□□□□ -1.42
ATG4YNL223W YNL115CP53925 644 aa6.21□□□□□ -1.42
ATG4YNL223W CDC55Q00362 526 aa6.21□□□□□ -1.42
ATG4YNL223W RNT1Q02555 471 aa6.21□□□□□ -1.42
ATG4YNL223W RCR2Q03446 210 aaKnown RBP6.21□□□□□ -1.42
ATG4YNL223W THI7Q05998 598 aa6.21□□□□□ -1.42
ATG4YNL223W YRR1Q12172 810 aa6.21□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 71.5 ms