RNA–Protein interactions for RNA: YNL025C

SSN8, Transcript of Cyclin-like component of the RNA polymerase II holoenzyme, yeastyeast

Gene SSN8, Length 972 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN8YNL025C UPC2Q12151 913 aa3.41□□□□□ -1.86
SSN8YNL025C RRG1Q12167 365 aaPredicted RBP3.41□□□□□ -1.86
SSN8YNL025C VMA2P16140 517 aaKnown RBP3.4□□□□□ -1.87
SSN8YNL025C SPO16P17122 198 aa3.4□□□□□ -1.87
SSN8YNL025C RAD16P31244 790 aa3.4□□□□□ -1.87
SSN8YNL025C ECM32P32644 1121 aaKnown RBP3.4□□□□□ -1.87
SSN8YNL025C NPL6P32832 435 aa3.4□□□□□ -1.87
SSN8YNL025C BEM3P32873 1128 aa3.4□□□□□ -1.87
SSN8YNL025C UBS1P38290 277 aa3.4□□□□□ -1.87
SSN8YNL025C BIT2P38346 545 aa3.4□□□□□ -1.87
SSN8YNL025C RRF1P38771 230 aa3.4□□□□□ -1.87
SSN8YNL025C GUS1P46655 708 aaKnown RBP RIP-Chip data3.4□□□□□ -1.87not detected
SSN8YNL025C MNN11P46985 422 aaKnown RBP3.4□□□□□ -1.87
SSN8YNL025C BNA1P47096 177 aa3.4□□□□□ -1.87
SSN8YNL025C YKE2P52553 114 aa3.4□□□□□ -1.87
SSN8YNL025C ZIP2P53061 704 aa3.4□□□□□ -1.87
SSN8YNL025C MET13P53128 600 aa3.4□□□□□ -1.87
SSN8YNL025C MEP3P53390 489 aa3.4□□□□□ -1.87
SSN8YNL025C CNM67P53865 581 aaKnown RBP3.4□□□□□ -1.87
SSN8YNL025C YNL058CP53947 316 aa3.4□□□□□ -1.87
SSN8YNL025C FCP1Q03254 732 aa3.4□□□□□ -1.87
SSN8YNL025C SYF1Q04048 859 aaPredicted RBP3.4□□□□□ -1.87
SSN8YNL025C TDA9Q04545 1251 aa3.4□□□□□ -1.87
SSN8YNL025C OMS1Q06668 471 aa3.4□□□□□ -1.87
SSN8YNL025C GUD1Q07729 489 aa3.4□□□□□ -1.87
SSN8YNL025C YLR040CQ07988 224 aa3.4□□□□□ -1.87
SSN8YNL025C HBN1Q96VH4 193 aa3.4□□□□□ -1.87
SSN8YNL025C SAC3P46674 1301 aa3.4□□□□□ -1.87
SSN8YNL025C SRD1P09007 221 aa3.39□□□□□ -1.87
SSN8YNL025C APA1P16550 321 aaKnown RBP3.39□□□□□ -1.87
SSN8YNL025C SFL1P20134 766 aa3.39□□□□□ -1.87
SSN8YNL025C STE14P32584 239 aa3.39□□□□□ -1.87
SSN8YNL025C XRS2P33301 854 aa3.39□□□□□ -1.87
SSN8YNL025C CCT3P39077 534 aaKnown RBP3.39□□□□□ -1.87
SSN8YNL025C OAF1P39720 1047 aaPredicted RBP3.39□□□□□ -1.87
SSN8YNL025C SPC72P39723 622 aa3.39□□□□□ -1.87
SSN8YNL025C TIF4631P39935 952 aaKnown RBP3.39□□□□□ -1.87
SSN8YNL025C YER158CP40095 573 aa3.39□□□□□ -1.87
SSN8YNL025C UBP6P43593 499 aaKnown RBP3.39□□□□□ -1.87
SSN8YNL025C FYV8P46949 817 aaKnown RBP3.39□□□□□ -1.87
SSN8YNL025C YJR096WP47137 282 aa3.39□□□□□ -1.87
SSN8YNL025C RAI1P53063 387 aaKnown RBP3.39□□□□□ -1.87
SSN8YNL025C NPY1P53164 384 aa3.39□□□□□ -1.87
SSN8YNL025C CWC21Q03375 135 aaKnown RBP3.39□□□□□ -1.87
SSN8YNL025C YDR286CQ05530 114 aa3.39□□□□□ -1.87
SSN8YNL025C WHI4Q07655 649 aaKnown RBP3.39□□□□□ -1.87
SSN8YNL025C PSR1Q07800 427 aa3.39□□□□□ -1.87
SSN8YNL025C APC5Q08683 685 aa3.39□□□□□ -1.87
SSN8YNL025C CFT2Q12102 859 aaPredicted RBP3.39□□□□□ -1.87
SSN8YNL025C PHR1P05066 565 aaKnown RBP RIP-Chip data3.38□□□□□ -1.87not detected
SSN8YNL025C MSS18P08593 268 aa3.38□□□□□ -1.87
SSN8YNL025C TRX1P22217 103 aaKnown RBP3.38□□□□□ -1.87
SSN8YNL025C ERG4P25340 473 aa3.38□□□□□ -1.87
SSN8YNL025C SED4P25365 1065 aa3.38□□□□□ -1.87
SSN8YNL025C PCL2P25693 308 aa3.38□□□□□ -1.87
SSN8YNL025C HEM12P32347 362 aaPredicted RBP3.38□□□□□ -1.87
SSN8YNL025C NGG1P32494 702 aa3.38□□□□□ -1.87
SSN8YNL025C RPN2P32565 945 aaKnown RBP3.38□□□□□ -1.87
SSN8YNL025C RPT3P33298 428 aaKnown RBP3.38□□□□□ -1.87
SSN8YNL025C SPC29P33419 253 aa3.38□□□□□ -1.87
SSN8YNL025C TSL1P38427 1098 aaKnown RBP3.38□□□□□ -1.87
SSN8YNL025C SIT1P39980 628 aa3.38□□□□□ -1.87
SSN8YNL025C ARF3P40994 183 aaRIP-Chip data3.38□□□□□ -1.87not detected
SSN8YNL025C QRI7P43122 407 aa3.38□□□□□ -1.87
SSN8YNL025C QRI1P43123 477 aaKnown RBP3.38□□□□□ -1.87
SSN8YNL025C ALG2P43636 503 aa3.38□□□□□ -1.87
SSN8YNL025C SHE10P53075 577 aa3.38□□□□□ -1.87
SSN8YNL025C BNI5P53890 448 aaKnown RBP3.38□□□□□ -1.87
SSN8YNL025C SEC5P89102 971 aa3.38□□□□□ -1.87
SSN8YNL025C GTR1Q00582 310 aa3.38□□□□□ -1.87
SSN8YNL025C DUS3Q06053 668 aaKnown RBP3.38□□□□□ -1.87
SSN8YNL025C YLH47Q06493 454 aa3.38□□□□□ -1.87
SSN8YNL025C PEX15Q08215 383 aa3.38□□□□□ -1.87
SSN8YNL025C SMF3Q12078 473 aaPredicted RBP3.38□□□□□ -1.87
SSN8YNL025C CDC9P04819 755 aa3.37□□□□□ -1.87
SSN8YNL025C RPC40P07703 335 aaKnown RBP3.37□□□□□ -1.87
SSN8YNL025C FBP1P09201 348 aa3.37□□□□□ -1.87
SSN8YNL025C RAD18P10862 487 aa3.37□□□□□ -1.87
SSN8YNL025C PDX1P16451 410 aa3.37□□□□□ -1.87
SSN8YNL025C GLK1P17709 500 aaKnown RBP3.37□□□□□ -1.87
SSN8YNL025C COX11P19516 300 aaKnown RBP3.37□□□□□ -1.87
SSN8YNL025C SAN1P22470 610 aa3.37□□□□□ -1.87
SSN8YNL025C AAR2P32357 355 aaPredicted RBP3.37□□□□□ -1.87
SSN8YNL025C IME2P32581 645 aa3.37□□□□□ -1.87
SSN8YNL025C YKU70P32807 602 aa3.37□□□□□ -1.87
SSN8YNL025C CNS1P33313 385 aa3.37□□□□□ -1.87
SSN8YNL025C DHR2P36009 735 aaPredicted RBP3.37□□□□□ -1.87
SSN8YNL025C SUL1P38359 859 aa3.37□□□□□ -1.87
SSN8YNL025C MBP1P39678 833 aa3.37□□□□□ -1.87
SSN8YNL025C AXL1P40851 1208 aa3.37□□□□□ -1.87
SSN8YNL025C CIR1P42940 261 aa3.37□□□□□ -1.87
SSN8YNL025C CAF16P43569 289 aa3.37□□□□□ -1.87
SSN8YNL025C IRC6P43615 237 aa3.37□□□□□ -1.87
SSN8YNL025C STU2P46675 888 aa3.37□□□□□ -1.87
SSN8YNL025C AIM14P53109 570 aa3.37□□□□□ -1.87
SSN8YNL025C RIA1P53893 1110 aa3.37□□□□□ -1.87
SSN8YNL025C LAP3Q01532 483 aaKnown RBP RIP-Chip data3.37□□□□□ -1.87not detected
SSN8YNL025C TIM44Q01852 431 aa3.37□□□□□ -1.87
SSN8YNL025C RNT1Q02555 471 aa3.37□□□□□ -1.87
SSN8YNL025C SKY1Q03656 742 aa3.37□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 64.3 ms