RNA–Protein interactions for RNA: YMR183C

SSO2, Transcript of Plasma membrane t-SNARE, yeastyeast

Gene SSO2, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSO2YMR183C MAL31P38156 614 aa4.42□□□□□ -1.7
SSO2YMR183C YHR112CP38716 378 aa4.42□□□□□ -1.7
SSO2YMR183C REV7P38927 245 aa4.42□□□□□ -1.7
SSO2YMR183C CCT3P39077 534 aaKnown RBP4.42□□□□□ -1.7
SSO2YMR183C SSL2Q00578 843 aa4.42□□□□□ -1.7
SSO2YMR183C CTK1Q03957 528 aaKnown RBP4.42□□□□□ -1.7
SSO2YMR183C COG8Q04632 607 aa4.42□□□□□ -1.7
SSO2YMR183C RPN7Q06103 429 aaKnown RBP4.42□□□□□ -1.7
SSO2YMR183C MRH1Q12117 320 aaPredicted RBP4.42□□□□□ -1.7
SSO2YMR183C RRP6Q12149 733 aaKnown RBP4.42□□□□□ -1.7
SSO2YMR183C SIR3P06701 978 aa4.41□□□□□ -1.7
SSO2YMR183C AEP2P22136 580 aa4.41□□□□□ -1.7
SSO2YMR183C YEL1P34225 687 aa4.41□□□□□ -1.7
SSO2YMR183C YKL133CP36066 463 aa4.41□□□□□ -1.7
SSO2YMR183C YKR018CP36114 725 aa4.41□□□□□ -1.7
SSO2YMR183C ATF1P40353 525 aa4.41□□□□□ -1.7
SSO2YMR183C SAP185P40856 1058 aa4.41□□□□□ -1.7
SSO2YMR183C MTL1P53214 551 aa4.41□□□□□ -1.7
SSO2YMR183C YML131WQ03102 365 aa4.41□□□□□ -1.7
SSO2YMR183C MLC2Q06580 163 aa4.41□□□□□ -1.7
SSO2YMR183C PSR2Q07949 397 aa4.41□□□□□ -1.7
SSO2YMR183C MSL5Q12186 476 aaKnown RBP RIP-Chip data4.41□□□□□ -1.7not detected
SSO2YMR183C FOB1O13329 566 aa4.4□□□□□ -1.71
SSO2YMR183C APA1P16550 321 aaKnown RBP4.4□□□□□ -1.71
SSO2YMR183C TFC3P34111 1160 aa4.4□□□□□ -1.71
SSO2YMR183C LYS9P38999 446 aa4.4□□□□□ -1.71
SSO2YMR183C RSC8P43609 557 aaKnown RBP4.4□□□□□ -1.71
SSO2YMR183C PCL10P53124 433 aa4.4□□□□□ -1.71
SSO2YMR183C MET13P53128 600 aa4.4□□□□□ -1.71
SSO2YMR183C PAP2P53632 584 aaKnown RBP4.4□□□□□ -1.71
SSO2YMR183C REC102Q02721 264 aa4.4□□□□□ -1.71
SSO2YMR183C SNU66Q12420 587 aaPredicted RBP4.4□□□□□ -1.71
SSO2YMR183C RTP1Q12751 981 aa4.4□□□□□ -1.71
SSO2YMR183C YKL033W-AQ86ZR7 236 aa4.4□□□□□ -1.71
SSO2YMR183C CDC43P18898 376 aa4.39□□□□□ -1.71
SSO2YMR183C OPI1P21957 404 aa4.39□□□□□ -1.71
SSO2YMR183C KCC4P25389 1037 aa4.39□□□□□ -1.71
SSO2YMR183C PCL2P25693 308 aa4.39□□□□□ -1.71
SSO2YMR183C RPS0AP32905 252 aaKnown RBP4.39□□□□□ -1.71
SSO2YMR183C CBR1P38626 284 aaKnown RBP4.39□□□□□ -1.71
SSO2YMR183C FMO1P38866 432 aa4.39□□□□□ -1.71
SSO2YMR183C NUP60P39705 539 aa4.39□□□□□ -1.71
SSO2YMR183C NDE1P40215 560 aa4.39□□□□□ -1.71
SSO2YMR183C DUG1P43616 481 aaKnown RBP4.39□□□□□ -1.71
SSO2YMR183C YJR096WP47137 282 aa4.39□□□□□ -1.71
SSO2YMR183C HMO1Q03973 246 aaKnown RBP4.39□□□□□ -1.71
SSO2YMR183C PHM6Q05637 104 aa4.39□□□□□ -1.71
SSO2YMR183C HRP1Q99383 534 aaKnown RBP4.39□□□□□ -1.71
SSO2YMR183C GFA1P14742 717 aaKnown RBP4.38□□□□□ -1.71
SSO2YMR183C SFL1P20134 766 aa4.38□□□□□ -1.71
SSO2YMR183C KIN3P22209 435 aa4.38□□□□□ -1.71
SSO2YMR183C DBF20P32328 564 aa4.38□□□□□ -1.71
SSO2YMR183C MVD1P32377 396 aaKnown RBP4.38□□□□□ -1.71
SSO2YMR183C YHL041WP38730 149 aa4.38□□□□□ -1.71
SSO2YMR183C DOT6P40059 670 aaKnown RBP4.38□□□□□ -1.71
SSO2YMR183C GID8P40208 455 aa4.38□□□□□ -1.71
SSO2YMR183C MNT3P40549 630 aa4.38□□□□□ -1.71
SSO2YMR183C NIT2P47016 307 aa4.38□□□□□ -1.71
SSO2YMR183C IML2P47031 731 aa4.38□□□□□ -1.71
SSO2YMR183C SRB7P47822 140 aa4.38□□□□□ -1.71
SSO2YMR183C UBC9P50623 157 aaPredicted RBP4.38□□□□□ -1.71
SSO2YMR183C SMX3P54999 86 aaPredicted RBP4.38□□□□□ -1.71
SSO2YMR183C TSR2Q06672 205 aaKnown RBP4.38□□□□□ -1.71
SSO2YMR183C YTM1Q12024 460 aaPredicted RBP4.38□□□□□ -1.71
SSO2YMR183C RMP1Q12530 201 aa4.38□□□□□ -1.71
SSO2YMR183C PYC1P11154 1178 aaKnown RBP4.37□□□□□ -1.71
SSO2YMR183C PHO81P17442 1178 aa4.37□□□□□ -1.71
SSO2YMR183C ERG6P25087 383 aaKnown RBP4.37□□□□□ -1.71
SSO2YMR183C CHS3P29465 1165 aa4.37□□□□□ -1.71
SSO2YMR183C CKB2P38930 258 aa4.37□□□□□ -1.71
SSO2YMR183C RRP8P38961 392 aaKnown RBP4.37□□□□□ -1.71
SSO2YMR183C OAF1P39720 1047 aaPredicted RBP4.37□□□□□ -1.71
SSO2YMR183C PAN2P53010 1115 aaPredicted RBP4.37□□□□□ -1.71
SSO2YMR183C ARP4P80428 489 aa4.37□□□□□ -1.71
SSO2YMR183C LGE1Q02796 332 aaKnown RBP4.37□□□□□ -1.71
SSO2YMR183C ATG33Q06485 197 aa4.37□□□□□ -1.71
SSO2YMR183C GUD1Q07729 489 aa4.37□□□□□ -1.71
SSO2YMR183C SSP2Q08646 371 aa4.37□□□□□ -1.71
SSO2YMR183C NEW1Q08972 1196 aaKnown RBP4.37□□□□□ -1.71
SSO2YMR183C RNR1P21524 888 aaKnown RBP4.36□□□□□ -1.71
SSO2YMR183C MCM10P32354 571 aa4.36□□□□□ -1.71
SSO2YMR183C SWI3P32591 825 aa4.36□□□□□ -1.71
SSO2YMR183C TDP1P38319 544 aa4.36□□□□□ -1.71
SSO2YMR183C PCM1P38628 557 aaKnown RBP4.36□□□□□ -1.71
SSO2YMR183C SFB3P38810 929 aa4.36□□□□□ -1.71
SSO2YMR183C HIS6P40545 261 aa4.36□□□□□ -1.71
SSO2YMR183C GZF3P42944 551 aaKnown RBP4.36□□□□□ -1.71
SSO2YMR183C VPS73P53142 486 aaKnown RBP4.36□□□□□ -1.71
SSO2YMR183C FHN1P53279 174 aa4.36□□□□□ -1.71
SSO2YMR183C SUT2Q12286 268 aa4.36□□□□□ -1.71
SSO2YMR183C YOL087CQ99247 1116 aa4.36□□□□□ -1.71
SSO2YMR183C HMG1P12683 1054 aa4.35□□□□□ -1.71
SSO2YMR183C HCA4P20448 770 aaKnown RBP4.35□□□□□ -1.71
SSO2YMR183C PEX1P24004 1043 aa4.35□□□□□ -1.71
SSO2YMR183C DMC1P25453 334 aa4.35□□□□□ -1.71
SSO2YMR183C CCR4P31384 837 aaKnown RBP4.35□□□□□ -1.71
SSO2YMR183C HRB1P38922 454 aaKnown RBP RIP-Chip data4.35□□□□□ -1.71not detected
SSO2YMR183C YJL206CP39529 758 aa4.35□□□□□ -1.71
SSO2YMR183C GPP2P40106 250 aaKnown RBP4.35□□□□□ -1.71
SSO2YMR183C NDC80P40460 691 aa4.35□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 68.8 ms