RNA–Protein interactions for RNA: YMR153W

NUP53, Transcript of FG-nucleoporin component of central core of nuclear pore complex (NPC), yeastyeast

Gene NUP53, Length 1,428 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP53YMR153W VMA4P22203 233 aaKnown RBP8.08□□□□□ -1.12
NUP53YMR153W HCM1P25364 564 aa8.08□□□□□ -1.12
NUP53YMR153W SPT5P27692 1063 aaKnown RBP8.08□□□□□ -1.12
NUP53YMR153W GYP6P32806 458 aa8.08□□□□□ -1.12
NUP53YMR153W YMC2P38087 329 aa8.08□□□□□ -1.12
NUP53YMR153W NEM1P38757 446 aa8.08□□□□□ -1.12
NUP53YMR153W KRE33P53914 1056 aaKnown RBP8.08□□□□□ -1.12
NUP53YMR153W ESBP6P53918 673 aa8.08□□□□□ -1.12
NUP53YMR153W CET1O13297 549 aaPredicted RBP8.07□□□□□ -1.12
NUP53YMR153W RPS6AP0CX37 236 aaKnown RBP8.07□□□□□ -1.12
NUP53YMR153W RPS6BP0CX38 236 aaPredicted RBP8.07□□□□□ -1.12
NUP53YMR153W RGR1P19263 1082 aa8.07□□□□□ -1.12
NUP53YMR153W SEC65P29478 273 aa8.07□□□□□ -1.12
NUP53YMR153W PSE1P32337 1089 aaKnown RBP8.07□□□□□ -1.12
NUP53YMR153W SAP190P36123 1033 aa8.07□□□□□ -1.12
NUP53YMR153W SSP1P38871 571 aa8.07□□□□□ -1.12
NUP53YMR153W YEL075CP39972 122 aa8.07□□□□□ -1.12
NUP53YMR153W SDS3P40505 327 aa8.07□□□□□ -1.12
NUP53YMR153W SSL2Q00578 843 aa8.07□□□□□ -1.12
NUP53YMR153W TOF2Q02208 771 aa8.07□□□□□ -1.12
NUP53YMR153W LPX1Q12405 387 aaKnown RBP8.07□□□□□ -1.12
NUP53YMR153W YOL098CQ12496 1037 aa8.07□□□□□ -1.12
NUP53YMR153W ECM32P32644 1121 aaKnown RBP8.06□□□□□ -1.12
NUP53YMR153W HSP78P33416 811 aa8.06□□□□□ -1.12
NUP53YMR153W PTC3P34221 468 aaKnown RBP8.06□□□□□ -1.12
NUP53YMR153W DOT6P40059 670 aaKnown RBP8.06□□□□□ -1.12
NUP53YMR153W UFE1P41834 346 aa8.06□□□□□ -1.12
NUP53YMR153W SEG1Q04279 960 aa8.06□□□□□ -1.12
NUP53YMR153W SPG3Q04398 127 aaPredicted RBP8.06□□□□□ -1.12
NUP53YMR153W APC5Q08683 685 aa8.06□□□□□ -1.12
NUP53YMR153W MPD2Q99316 277 aa8.06□□□□□ -1.12
NUP53YMR153W CAN1P04817 590 aa8.05□□□□□ -1.12
NUP53YMR153W GPI10P30777 616 aa8.05□□□□□ -1.12
NUP53YMR153W STE5P32917 917 aa8.05□□□□□ -1.12
NUP53YMR153W SWE1P32944 819 aa8.05□□□□□ -1.12
NUP53YMR153W TRZ1P36159 838 aaPredicted RBP8.05□□□□□ -1.12
NUP53YMR153W SHM1P37292 490 aaPredicted RBP8.05□□□□□ -1.12
NUP53YMR153W ATG12P38316 186 aa8.05□□□□□ -1.12
NUP53YMR153W GGA2P38817 585 aaKnown RBP8.05□□□□□ -1.12
NUP53YMR153W FMO1P38866 432 aa8.05□□□□□ -1.12
NUP53YMR153W RSM26P47141 266 aa8.05□□□□□ -1.12
NUP53YMR153W HOP2P53187 214 aa8.05□□□□□ -1.12
NUP53YMR153W DIS3Q08162 1001 aaKnown RBP8.05□□□□□ -1.12
NUP53YMR153W RPS3P05750 240 aaKnown RBP8.04□□□□□ -1.12
NUP53YMR153W HOM2P13663 365 aaKnown RBP8.04□□□□□ -1.12
NUP53YMR153W AEP2P22136 580 aa8.04□□□□□ -1.12
NUP53YMR153W MSH2P25847 964 aa8.04□□□□□ -1.12
NUP53YMR153W ABZ1P37254 787 aaPredicted RBP8.04□□□□□ -1.12
NUP53YMR153W MAP2P38174 421 aaKnown RBP8.04□□□□□ -1.12
NUP53YMR153W ECM13P38195 257 aa8.04□□□□□ -1.12
NUP53YMR153W STU2P46675 888 aa8.04□□□□□ -1.12
NUP53YMR153W PHO86P46956 311 aa8.04□□□□□ -1.12
NUP53YMR153W COQ6P53318 479 aa8.04□□□□□ -1.12
NUP53YMR153W TAF9Q05027 157 aa8.04□□□□□ -1.12
NUP53YMR153W YCG1Q06680 1035 aa8.04□□□□□ -1.12
NUP53YMR153W YPR084WQ06821 456 aa8.04□□□□□ -1.12
NUP53YMR153W YOR387CQ08910 206 aa8.04□□□□□ -1.12
NUP53YMR153W EMP46Q12396 444 aa8.04□□□□□ -1.12
NUP53YMR153W JNM1P36224 373 aa8.03□□□□□ -1.12
NUP53YMR153W ARL1P38116 183 aaKnown RBP8.03□□□□□ -1.12
NUP53YMR153W YBR053CP38235 358 aa8.03□□□□□ -1.12
NUP53YMR153W EXO5P38289 585 aa8.03□□□□□ -1.12
NUP53YMR153W QNS1P38795 714 aaKnown RBP8.03□□□□□ -1.12
NUP53YMR153W NMA2P53204 395 aa8.03□□□□□ -1.12
NUP53YMR153W YPL062WQ02781 134 aa8.03□□□□□ -1.12
NUP53YMR153W YML053CQ04978 212 aa8.03□□□□□ -1.12
NUP53YMR153W YLR287CQ05881 355 aa8.03□□□□□ -1.12
NUP53YMR153W ARP7Q12406 477 aa8.03□□□□□ -1.12
NUP53YMR153W RPL17AP05740 184 aaKnown RBP8.03□□□□□ -1.12
NUP53YMR153W CAP1P28495 268 aaKnown RBP8.03□□□□□ -1.12
NUP53YMR153W RRN6P32786 894 aa8.03□□□□□ -1.12
NUP53YMR153W SGE1P33335 543 aa8.03□□□□□ -1.12
NUP53YMR153W TIF5P38431 405 aaKnown RBP8.03□□□□□ -1.12
NUP53YMR153W PSY2P40164 858 aa8.03□□□□□ -1.12
NUP53YMR153W LSB3P43603 459 aaKnown RBP8.03□□□□□ -1.12
NUP53YMR153W RPL17BP46990 184 aaKnown RBP8.03□□□□□ -1.12
NUP53YMR153W TAD1P53065 400 aa8.03□□□□□ -1.12
NUP53YMR153W YNR065CP53751 1116 aa8.03□□□□□ -1.12
NUP53YMR153W EAF7P53911 425 aaKnown RBP8.03□□□□□ -1.12
NUP53YMR153W NIS1P53939 407 aa8.03□□□□□ -1.12
NUP53YMR153W UME1Q03010 460 aa8.03□□□□□ -1.12
NUP53YMR153W PIR3Q03180 325 aa8.03□□□□□ -1.12
NUP53YMR153W MFB1Q04922 465 aa8.03□□□□□ -1.12
NUP53YMR153W THI20Q08224 551 aa8.03□□□□□ -1.12
NUP53YMR153W YOR059CQ08448 450 aaKnown RBP8.03□□□□□ -1.12
NUP53YMR153W SVS1Q12254 260 aa8.03□□□□□ -1.12
NUP53YMR153W FMP27Q06179 2628 aa8.02□□□□□ -1.13
NUP53YMR153W ENO2P00925 437 aaKnown RBP8.02□□□□□ -1.13
NUP53YMR153W TUP1P16649 713 aa8.02□□□□□ -1.13
NUP53YMR153W KAR3P17119 729 aa8.02□□□□□ -1.13
NUP53YMR153W KIN3P22209 435 aa8.02□□□□□ -1.13
NUP53YMR153W IME2P32581 645 aa8.02□□□□□ -1.13
NUP53YMR153W MRP4P32902 394 aa8.02□□□□□ -1.13
NUP53YMR153W SRB2P34162 210 aa8.02□□□□□ -1.13
NUP53YMR153W SPT23P35210 1082 aa8.02□□□□□ -1.13
NUP53YMR153W KTR4P38131 464 aa8.02□□□□□ -1.13
NUP53YMR153W VFA1P40080 203 aa8.02□□□□□ -1.13
NUP53YMR153W UBP7P40453 1071 aa8.02□□□□□ -1.13
NUP53YMR153W MMM1P41800 426 aa8.02□□□□□ -1.13
NUP53YMR153W TFG2P41896 400 aaPredicted RBP8.02□□□□□ -1.13
Retrieved 100 of 5,963 RNA–protein pairs in 30.5 ms