RNA–Protein interactions for RNA: YMR044W

IOC4, Transcript of Member of a complex (Isw1b) with Isw1p and Ioc2p, yeast

Gene IOC4, Length 1,428 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
IOC4	YMR044W	BRE4	Q07660	1125 aa		4.8	□□□□□ -1.64
IOC4	YMR044W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.8	□□□□□ -1.64	not detected
IOC4	YMR044W	PHO5	P00635	467 aa		4.8	□□□□□ -1.64
IOC4	YMR044W	MIS1	P09440	975 aa	Known RBP	4.8	□□□□□ -1.64
IOC4	YMR044W	YEL076C-A	P0CX16	216 aa		4.8	□□□□□ -1.64
IOC4	YMR044W	YLR464W	P0CX17	216 aa		4.8	□□□□□ -1.64
IOC4	YMR044W	MTF2	P10849	440 aa		4.8	□□□□□ -1.64
IOC4	YMR044W	CMP2	P14747	604 aa		4.8	□□□□□ -1.64
IOC4	YMR044W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.8	□□□□□ -1.64	not detected
IOC4	YMR044W	MCM3	P24279	971 aa	Known RBP	4.8	□□□□□ -1.64
IOC4	YMR044W	CLB4	P24871	460 aa		4.8	□□□□□ -1.64
IOC4	YMR044W	ADP1	P25371	1049 aa		4.8	□□□□□ -1.64
IOC4	YMR044W	YCL049C	P25577	312 aa		4.8	□□□□□ -1.64
IOC4	YMR044W	HXT4	P32467	576 aa		4.8	□□□□□ -1.64
IOC4	YMR044W	VMA8	P32610	256 aa	Known RBP	4.8	□□□□□ -1.64
IOC4	YMR044W	MRPL36	P36531	177 aa		4.8	□□□□□ -1.64
IOC4	YMR044W	DUN1	P39009	513 aa		4.8	□□□□□ -1.64
IOC4	YMR044W	YEL076C	P39971	216 aa		4.8	□□□□□ -1.64
IOC4	YMR044W	PUG1	P40100	303 aa		4.8	□□□□□ -1.64
IOC4	YMR044W	GPD2	P41911	440 aa	Known RBP	4.8	□□□□□ -1.64
IOC4	YMR044W	BRE5	P53741	515 aa	Known RBP	4.8	□□□□□ -1.64
IOC4	YMR044W	MTD1	Q02046	320 aa	Known RBP	4.8	□□□□□ -1.64
IOC4	YMR044W	LEE1	Q02799	301 aa	Known RBP	4.8	□□□□□ -1.64
IOC4	YMR044W	YMR210W	Q03649	449 aa		4.8	□□□□□ -1.64
IOC4	YMR044W	YLR407W	Q06070	228 aa		4.8	□□□□□ -1.64
IOC4	YMR044W	YCG1	Q06680	1035 aa		4.8	□□□□□ -1.64
IOC4	YMR044W	RRG1	Q12167	365 aa	Predicted RBP	4.8	□□□□□ -1.64
IOC4	YMR044W	PUS1	Q12211	544 aa	Known RBP	4.8	□□□□□ -1.64
IOC4	YMR044W	SCM3	Q12334	223 aa		4.8	□□□□□ -1.64
IOC4	YMR044W	LPX1	Q12405	387 aa	Known RBP	4.8	□□□□□ -1.64
IOC4	YMR044W	CDC26	P14724	124 aa		4.79	□□□□□ -1.64
IOC4	YMR044W	CBP3	P21560	335 aa		4.79	□□□□□ -1.64
IOC4	YMR044W	UBC1	P21734	215 aa	Known RBP	4.79	□□□□□ -1.64
IOC4	YMR044W	MUM2	P38236	366 aa		4.79	□□□□□ -1.64
IOC4	YMR044W	BEM4	P39011	633 aa		4.79	□□□□□ -1.64
IOC4	YMR044W	SSP120	P39931	234 aa	Known RBP	4.79	□□□□□ -1.64
IOC4	YMR044W	DPH1	P40487	425 aa	Known RBP	4.79	□□□□□ -1.64
IOC4	YMR044W	SSY5	P47002	699 aa		4.79	□□□□□ -1.64
IOC4	YMR044W	ENP2	P48234	707 aa	Known RBP	4.79	□□□□□ -1.64
IOC4	YMR044W	YGR130C	P53278	816 aa		4.79	□□□□□ -1.64
IOC4	YMR044W	CPR6	P53691	371 aa	Known RBP	4.79	□□□□□ -1.64
IOC4	YMR044W	YPL034W	Q03083	165 aa		4.79	□□□□□ -1.64
IOC4	YMR044W	ASM4	Q05166	528 aa		4.79	□□□□□ -1.64
IOC4	YMR044W	VID22	Q05934	901 aa		4.79	□□□□□ -1.64
IOC4	YMR044W	WHI4	Q07655	649 aa	Known RBP	4.79	□□□□□ -1.64
IOC4	YMR044W	RPS17A	P02407	136 aa	Known RBP	4.78	□□□□□ -1.64
IOC4	YMR044W	GAL10	P04397	699 aa		4.78	□□□□□ -1.64
IOC4	YMR044W	RPS17B	P14127	136 aa	Known RBP	4.78	□□□□□ -1.64
IOC4	YMR044W	NCP1	P16603	691 aa	Known RBP	4.78	□□□□□ -1.64
IOC4	YMR044W	AXL2	P38928	823 aa		4.78	□□□□□ -1.64
IOC4	YMR044W	MND2	P40577	368 aa		4.78	□□□□□ -1.64
IOC4	YMR044W	SYF1	Q04048	859 aa	Predicted RBP	4.78	□□□□□ -1.64
IOC4	YMR044W	ARA2	Q04212	335 aa		4.78	□□□□□ -1.64
IOC4	YMR044W	TRM8	Q12009	286 aa		4.78	□□□□□ -1.64
IOC4	YMR044W	YPR053C	Q6Q5F3	151 aa		4.78	□□□□□ -1.64
IOC4	YMR044W	CYC1	P00044	109 aa	Predicted RBP	4.77	□□□□□ -1.65
IOC4	YMR044W	FUM1	P08417	488 aa	Known RBP	4.77	□□□□□ -1.65
IOC4	YMR044W	SPE1	P08432	466 aa		4.77	□□□□□ -1.65
IOC4	YMR044W	POL3	P15436	1097 aa		4.77	□□□□□ -1.65
IOC4	YMR044W	GUK1	P15454	187 aa	Known RBP	4.77	□□□□□ -1.65
IOC4	YMR044W	DHR2	P36009	735 aa	Predicted RBP	4.77	□□□□□ -1.65
IOC4	YMR044W	KAE1	P36132	386 aa		4.77	□□□□□ -1.65
IOC4	YMR044W	RKM3	P38222	552 aa		4.77	□□□□□ -1.65
IOC4	YMR044W	CTF8	P38877	133 aa		4.77	□□□□□ -1.65
IOC4	YMR044W	SKN7	P38889	622 aa		4.77	□□□□□ -1.65
IOC4	YMR044W	YER010C	P40011	234 aa		4.77	□□□□□ -1.65
IOC4	YMR044W	PSP2	P50109	593 aa	Known RBP	4.77	□□□□□ -1.65
IOC4	YMR044W	YAP1802	P53309	568 aa		4.77	□□□□□ -1.65
IOC4	YMR044W	ORC4	P54791	529 aa		4.77	□□□□□ -1.65
IOC4	YMR044W	YKU80	Q04437	629 aa		4.77	□□□□□ -1.65
IOC4	YMR044W	SEM1	O94742	89 aa		4.76	□□□□□ -1.65
IOC4	YMR044W	HSP82	P02829	709 aa	Known RBP	4.76	□□□□□ -1.65
IOC4	YMR044W	CDC16	P09798	840 aa		4.76	□□□□□ -1.65
IOC4	YMR044W	SPO16	P17122	198 aa		4.76	□□□□□ -1.65
IOC4	YMR044W	AKL1	P38080	1108 aa	Known RBP	4.76	□□□□□ -1.65
IOC4	YMR044W	MIP6	P38760	659 aa	Known RBP	4.76	□□□□□ -1.65
IOC4	YMR044W	YHR078W	P38799	552 aa		4.76	□□□□□ -1.65
IOC4	YMR044W	APE4	P38821	490 aa		4.76	□□□□□ -1.65
IOC4	YMR044W	STT3	P39007	718 aa	Known RBP	4.76	□□□□□ -1.65
IOC4	YMR044W	KHA1	P40309	873 aa		4.76	□□□□□ -1.65
IOC4	YMR044W	RIC1	P40395	1056 aa		4.76	□□□□□ -1.65
IOC4	YMR044W	SDP1	P40479	209 aa		4.76	□□□□□ -1.65
IOC4	YMR044W	TAF11	Q04226	346 aa		4.76	□□□□□ -1.65
IOC4	YMR044W	CSR1	Q06705	408 aa	Known RBP	4.76	□□□□□ -1.65
IOC4	YMR044W	IWR1	Q07532	353 aa	Predicted RBP	4.76	□□□□□ -1.65
IOC4	YMR044W	VHS3	Q08438	674 aa		4.76	□□□□□ -1.65
IOC4	YMR044W	GPR1	Q12361	961 aa		4.76	□□□□□ -1.65
IOC4	YMR044W	VPS5	Q92331	675 aa		4.76	□□□□□ -1.65
IOC4	YMR044W	CYC7	P00045	113 aa		4.75	□□□□□ -1.65
IOC4	YMR044W	MET8	P15807	274 aa		4.75	□□□□□ -1.65
IOC4	YMR044W	RAD16	P31244	790 aa		4.75	□□□□□ -1.65
IOC4	YMR044W	MF(ALPHA)2	P32435	120 aa		4.75	□□□□□ -1.65
IOC4	YMR044W	VPH1	P32563	840 aa	Known RBP	4.75	□□□□□ -1.65
IOC4	YMR044W	LRG1	P35688	1017 aa		4.75	□□□□□ -1.65
IOC4	YMR044W	IFA38	P38286	347 aa		4.75	□□□□□ -1.65
IOC4	YMR044W	NPR3	P38742	1146 aa		4.75	□□□□□ -1.65
IOC4	YMR044W	SAK1	P38990	1142 aa		4.75	□□□□□ -1.65
IOC4	YMR044W	IMA5	P40884	581 aa		4.75	□□□□□ -1.65
IOC4	YMR044W	IRC6	P43615	237 aa		4.75	□□□□□ -1.65
IOC4	YMR044W	SET2	P46995	733 aa	Known RBP	4.75	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 52.4 ms