RNA–Protein interactions for RNA: YML046W

PRP39, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP39, Length 1,890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP39YML046W MIP6P38760 659 aaKnown RBP2.01□□□□□ -2.09
PRP39YML046W RSC8P43609 557 aaKnown RBP2.01□□□□□ -2.09
PRP39YML046W PMA2P19657 947 aa2.01□□□□□ -2.09
PRP39YML046W NTH1P32356 751 aa2.01□□□□□ -2.09
PRP39YML046W APD1P38281 316 aa2.01□□□□□ -2.09
PRP39YML046W RFX1P48743 811 aa2.01□□□□□ -2.09
PRP39YML046W SNF12P53628 566 aa2.01□□□□□ -2.09
PRP39YML046W IDP3P53982 420 aaKnown RBP2.01□□□□□ -2.09
PRP39YML046W MRPL1Q04599 285 aa2.01□□□□□ -2.09
PRP39YML046W URE2P23202 354 aaKnown RBP2□□□□□ -2.09
PRP39YML046W FEN2P25621 512 aaKnown RBP2□□□□□ -2.09
PRP39YML046W PER1P25625 357 aa2□□□□□ -2.09
PRP39YML046W SEC6P32844 805 aa2□□□□□ -2.09
PRP39YML046W YOX1P34161 385 aa2□□□□□ -2.09
PRP39YML046W RIM4P38741 713 aa2□□□□□ -2.09
PRP39YML046W ARE1P25628 610 aa1.99□□□□□ -2.09
PRP39YML046W MGM1P32266 881 aa1.99□□□□□ -2.09
PRP39YML046W YMR124WP39523 943 aaKnown RBP1.99□□□□□ -2.09
PRP39YML046W YFL052WP43551 465 aa1.99□□□□□ -2.09
PRP39YML046W ALG2P43636 503 aa1.99□□□□□ -2.09
PRP39YML046W BNA2P47125 453 aa1.99□□□□□ -2.09
PRP39YML046W TOM70P07213 617 aaKnown RBP1.99□□□□□ -2.09
PRP39YML046W RPL8BP29453 256 aaKnown RBP1.99□□□□□ -2.09
PRP39YML046W FLO5P38894 1075 aa1.99□□□□□ -2.09
PRP39YML046W OAF1P39720 1047 aaPredicted RBP1.99□□□□□ -2.09
PRP39YML046W SRL1Q08673 210 aa1.99□□□□□ -2.09
PRP39YML046W RPL7AP05737 244 aaKnown RBP1.98□□□□□ -2.09
PRP39YML046W ATO2P32907 282 aa1.98□□□□□ -2.09
PRP39YML046W RPC34P32910 317 aa1.98□□□□□ -2.09
PRP39YML046W GID8P40208 455 aa1.98□□□□□ -2.09
PRP39YML046W SPO75Q07798 868 aa1.98□□□□□ -2.09
PRP39YML046W RPL7BQ12213 244 aaKnown RBP1.98□□□□□ -2.09
PRP39YML046W AQY1P0CD91 305 aa1.97□□□□□ -2.09
PRP39YML046W HSL7P38274 827 aa1.97□□□□□ -2.09
PRP39YML046W YNL195CP40168 261 aa1.97□□□□□ -2.09
PRP39YML046W YJL043WP47053 257 aa1.97□□□□□ -2.09
PRP39YML046W DAK1P54838 584 aaKnown RBP1.97□□□□□ -2.09
PRP39YML046W TRS23Q03784 219 aa1.97□□□□□ -2.09
PRP39YML046W SNA4Q07549 140 aa1.97□□□□□ -2.09
PRP39YML046W ELF1P36053 145 aa1.97□□□□□ -2.09
PRP39YML046W YIL077CP40508 320 aa1.97□□□□□ -2.09
PRP39YML046W YDL124WQ07551 312 aaKnown RBP1.97□□□□□ -2.09
PRP39YML046W MSS1P32559 526 aaPredicted RBP1.96□□□□□ -2.1
PRP39YML046W ARC40P38328 384 aaKnown RBP1.96□□□□□ -2.1
PRP39YML046W BSP1Q06604 576 aa1.96□□□□□ -2.1
PRP39YML046W ZPS1Q12512 249 aa1.96□□□□□ -2.1
PRP39YML046W Q0142Q9ZZW4 58 aa1.96□□□□□ -2.1
PRP39YML046W YIL024CP40543 189 aa1.95□□□□□ -2.1
PRP39YML046W BST1P43571 1029 aa1.95□□□□□ -2.1
PRP39YML046W YGL260WP53056 76 aa1.95□□□□□ -2.1
PRP39YML046W JIP5Q06214 492 aaPredicted RBP1.95□□□□□ -2.1
PRP39YML046W SPA2P23201 1466 aaKnown RBP1.95□□□□□ -2.1
PRP39YML046W PIH1P38768 344 aa1.94□□□□□ -2.1
PRP39YML046W VAC8P39968 578 aa1.94□□□□□ -2.1
PRP39YML046W GRS2Q06817 618 aa1.94□□□□□ -2.1
PRP39YML046W OSH2Q12451 1283 aa1.94□□□□□ -2.1
PRP39YML046W YBR139WP38109 508 aa1.94□□□□□ -2.1
PRP39YML046W OPT1P40897 799 aa1.94□□□□□ -2.1
PRP39YML046W TY4A-JP47023 414 aa1.94□□□□□ -2.1
PRP39YML046W NPY1P53164 384 aa1.94□□□□□ -2.1
PRP39YML046W SVF1Q05515 481 aa1.94□□□□□ -2.1
PRP39YML046W YMR084WA2P2R3 262 aa1.93□□□□□ -2.1
PRP39YML046W CPA2P03965 1118 aaKnown RBP1.93□□□□□ -2.1
PRP39YML046W YMR085WP0CF18 432 aa1.93□□□□□ -2.1
PRP39YML046W YER190C-BP0CX94 160 aa1.93□□□□□ -2.1
PRP39YML046W YEL077W-AP0CX95 160 aa1.93□□□□□ -2.1
PRP39YML046W YGR296C-BP0CX96 160 aa1.93□□□□□ -2.1
PRP39YML046W YPL283W-BP0CX97 160 aa1.93□□□□□ -2.1
PRP39YML046W YPR204C-AP0CX98 160 aa1.93□□□□□ -2.1
PRP39YML046W THI6P41835 540 aa1.93□□□□□ -2.1
PRP39YML046W LYS20P48570 428 aaKnown RBP1.93□□□□□ -2.1
PRP39YML046W YFT2Q06676 274 aa1.93□□□□□ -2.1
PRP39YML046W IZH3Q07959 543 aa1.93□□□□□ -2.1
PRP39YML046W HSP60P19882 572 aaKnown RBP1.92□□□□□ -2.1
PRP39YML046W SEC15P22224 910 aa1.92□□□□□ -2.1
PRP39YML046W AKL1P38080 1108 aaKnown RBP1.92□□□□□ -2.1
PRP39YML046W COS111P38308 924 aa1.92□□□□□ -2.1
PRP39YML046W POM34Q12445 299 aa1.92□□□□□ -2.1
PRP39YML046W YLR111WQ12528 110 aa1.92□□□□□ -2.1
PRP39YML046W YEL076C-AP0CX16 216 aa1.92□□□□□ -2.1
PRP39YML046W YLR464WP0CX17 216 aa1.92□□□□□ -2.1
PRP39YML046W YCP4P25349 247 aaKnown RBP1.92□□□□□ -2.1
PRP39YML046W GSY2P27472 705 aa1.92□□□□□ -2.1
PRP39YML046W MRPL7P36519 292 aa1.92□□□□□ -2.1
PRP39YML046W YEL076CP39971 216 aa1.92□□□□□ -2.1
PRP39YML046W NRT1Q08485 598 aa1.92□□□□□ -2.1
PRP39YML046W APN2P38207 520 aa1.91□□□□□ -2.1
PRP39YML046W RTT107P38850 1070 aa1.91□□□□□ -2.1
PRP39YML046W HUL4P40985 892 aa1.91□□□□□ -2.1
PRP39YML046W PCL10P53124 433 aa1.91□□□□□ -2.1
PRP39YML046W ALD6P54115 500 aaKnown RBP1.91□□□□□ -2.1
PRP39YML046W NAN1Q02931 896 aaKnown RBP1.91□□□□□ -2.1
PRP39YML046W TAF8Q03750 510 aa1.91□□□□□ -2.1
PRP39YML046W RDL1Q12305 139 aaKnown RBP1.91□□□□□ -2.1
PRP39YML046W AIM44Q99299 758 aa1.91□□□□□ -2.1
PRP39YML046W SEC3P33332 1336 aaKnown RBP1.91□□□□□ -2.1
PRP39YML046W CFD1P40558 293 aa1.9□□□□□ -2.1
PRP39YML046W COQ6P53318 479 aa1.9□□□□□ -2.1
PRP39YML046W RTT103Q05543 409 aa1.9□□□□□ -2.1
PRP39YML046W RPN7Q06103 429 aaKnown RBP1.9□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 129.9 ms