RNA–Protein interactions for RNA: YLR430W

SEN1, Transcript of Presumed helicase and subunit of the Nrd1 complex (Nrd1p-Nab3p-Sen1p), yeastyeast

Gene SEN1, Length 6,696 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEN1YLR430W SSF1P38789 453 aaPredicted RBP4.35□□□□□ -1.71
SEN1YLR430W TAF6P53040 516 aa4.35□□□□□ -1.71
SEN1YLR430W YNR063WP53749 607 aa4.35□□□□□ -1.71
SEN1YLR430W MEC3Q02574 474 aa4.35□□□□□ -1.71
SEN1YLR430W SHR3Q02774 210 aa4.35□□□□□ -1.71
SEN1YLR430W UME1Q03010 460 aa4.35□□□□□ -1.71
SEN1YLR430W GYP1Q08484 637 aa4.35□□□□□ -1.71
SEN1YLR430W MNL2Q12205 849 aa4.35□□□□□ -1.71
SEN1YLR430W CKA2P19454 339 aa4.35□□□□□ -1.71
SEN1YLR430W CLN2P20438 545 aa4.35□□□□□ -1.71
SEN1YLR430W MEI4P29467 408 aa4.35□□□□□ -1.71
SEN1YLR430W DYS1P38791 387 aa4.35□□□□□ -1.71
SEN1YLR430W PCI8P40512 444 aa4.35□□□□□ -1.71
SEN1YLR430W BRE2P43132 505 aa4.35□□□□□ -1.71
SEN1YLR430W YNL040WP53960 456 aaPredicted RBP4.35□□□□□ -1.71
SEN1YLR430W HUA2Q12134 243 aa4.35□□□□□ -1.71
SEN1YLR430W YLR278CQ05854 1341 aa4.35□□□□□ -1.71
SEN1YLR430W GRS1P38088 690 aaKnown RBP4.35□□□□□ -1.71
SEN1YLR430W MIP6P38760 659 aaKnown RBP4.35□□□□□ -1.71
SEN1YLR430W ZRG8P40021 1076 aa4.35□□□□□ -1.71
SEN1YLR430W LYS4P49367 693 aaPredicted RBP4.35□□□□□ -1.71
SEN1YLR430W CWC21Q03375 135 aaKnown RBP4.35□□□□□ -1.71
SEN1YLR430W GPI17Q04080 534 aa4.35□□□□□ -1.71
SEN1YLR430W YOR093CQ12275 1648 aa4.34□□□□□ -1.71
SEN1YLR430W ATP6P00854 259 aa4.34□□□□□ -1.71
SEN1YLR430W ATP12P22135 325 aa4.34□□□□□ -1.71
SEN1YLR430W PPS1P38148 807 aa4.34□□□□□ -1.71
SEN1YLR430W MIG2P53035 382 aa4.34□□□□□ -1.71
SEN1YLR430W ALE1Q08548 619 aa4.34□□□□□ -1.71
SEN1YLR430W RTR2Q12378 196 aa4.34□□□□□ -1.71
SEN1YLR430W PMA2P19657 947 aa4.34□□□□□ -1.71
SEN1YLR430W SUV3P32580 737 aa4.34□□□□□ -1.71
SEN1YLR430W RAD24P32641 659 aa4.34□□□□□ -1.71
SEN1YLR430W SLM4P38247 162 aa4.34□□□□□ -1.71
SEN1YLR430W MTW1P39731 289 aa4.34□□□□□ -1.71
SEN1YLR430W ZRG17P53735 605 aa4.34□□□□□ -1.71
SEN1YLR430W ORC3P54790 616 aa4.34□□□□□ -1.71
SEN1YLR430W RPT6Q01939 405 aaKnown RBP4.34□□□□□ -1.71
SEN1YLR430W ACL4Q03771 387 aa4.34□□□□□ -1.71
SEN1YLR430W ESF1Q06344 628 aaKnown RBP4.34□□□□□ -1.71
SEN1YLR430W PEP12P32854 288 aa4.34□□□□□ -1.71
SEN1YLR430W ANR2P36090 516 aaPredicted RBP4.34□□□□□ -1.71
SEN1YLR430W YER034WP40022 185 aaKnown RBP4.34□□□□□ -1.71
SEN1YLR430W BUB1P41695 1021 aaKnown RBP RIP-Chip data4.34□□□□□ -1.71not detected
SEN1YLR430W YNL320WP42840 284 aa4.34□□□□□ -1.71
SEN1YLR430W FDC1Q03034 503 aa4.34□□□□□ -1.71
SEN1YLR430W LAM6Q08001 693 aa4.34□□□□□ -1.71
SEN1YLR430W AIM41Q12032 185 aa4.34□□□□□ -1.71
SEN1YLR430W CBP3P21560 335 aa4.34□□□□□ -1.72
SEN1YLR430W PMT1P33775 817 aa4.34□□□□□ -1.72
SEN1YLR430W YHR112CP38716 378 aa4.34□□□□□ -1.72
SEN1YLR430W VMA7P39111 118 aa4.34□□□□□ -1.72
SEN1YLR430W RPH1P39956 796 aa4.34□□□□□ -1.72
SEN1YLR430W QDR2P40474 542 aa4.34□□□□□ -1.72
SEN1YLR430W MNT3P40549 630 aa4.34□□□□□ -1.72
SEN1YLR430W EMC2P47133 292 aaKnown RBP4.34□□□□□ -1.72
SEN1YLR430W MAL11P53048 616 aa4.34□□□□□ -1.72
SEN1YLR430W MND1P53102 219 aa4.34□□□□□ -1.72
SEN1YLR430W RPL22BP56628 122 aaKnown RBP4.34□□□□□ -1.72
SEN1YLR430W DBP9Q06218 594 aaKnown RBP4.34□□□□□ -1.72
SEN1YLR430W DBP10Q12389 995 aaKnown RBP4.34□□□□□ -1.72
SEN1YLR430W ADR1P07248 1323 aa4.34□□□□□ -1.72
SEN1YLR430W MSD1P15179 658 aaKnown RBP4.34□□□□□ -1.72
SEN1YLR430W SEC31P38968 1273 aaKnown RBP4.34□□□□□ -1.72
SEN1YLR430W DTD1Q07648 150 aaKnown RBP4.34□□□□□ -1.72
SEN1YLR430W MAM3Q12296 706 aa4.34□□□□□ -1.72
SEN1YLR430W RAD61Q99359 647 aa4.34□□□□□ -1.72
SEN1YLR430W GPA2P10823 449 aa4.33□□□□□ -1.72
SEN1YLR430W CAD1P24813 409 aaKnown RBP4.33□□□□□ -1.72
SEN1YLR430W CLG1P35190 452 aa4.33□□□□□ -1.72
SEN1YLR430W HES1P35843 434 aa4.33□□□□□ -1.72
SEN1YLR430W MYO3P36006 1272 aa4.33□□□□□ -1.72
SEN1YLR430W FAF1P40546 346 aaPredicted RBP4.33□□□□□ -1.72
SEN1YLR430W NMD5P46970 1048 aa4.33□□□□□ -1.72
SEN1YLR430W MF(ALPHA)1P01149 165 aa4.33□□□□□ -1.72
SEN1YLR430W KIP2P28743 706 aa4.33□□□□□ -1.72
SEN1YLR430W TEF4P36008 412 aaKnown RBP4.33□□□□□ -1.72
SEN1YLR430W EMW1P42842 904 aaKnown RBP4.33□□□□□ -1.72
SEN1YLR430W BCP1Q06338 283 aa4.33□□□□□ -1.72
SEN1YLR430W RAX1Q08760 435 aa4.33□□□□□ -1.72
SEN1YLR430W SAH1P39954 449 aaKnown RBP4.33□□□□□ -1.72
SEN1YLR430W EMP65P40085 556 aa4.33□□□□□ -1.72
SEN1YLR430W LSM1P47017 172 aaKnown RBP4.33□□□□□ -1.72
SEN1YLR430W LSM8P47093 109 aaKnown RBP4.33□□□□□ -1.72
SEN1YLR430W MLC2Q06580 163 aa4.33□□□□□ -1.72
SEN1YLR430W MED2Q12124 431 aa4.33□□□□□ -1.72
SEN1YLR430W ATG34Q12292 412 aa4.33□□□□□ -1.72
SEN1YLR430W YBT1P32386 1661 aa4.33□□□□□ -1.72
SEN1YLR430W MRP7P12687 371 aa4.33□□□□□ -1.72
SEN1YLR430W NTH2P35172 780 aa4.33□□□□□ -1.72
SEN1YLR430W RAD30Q04049 632 aa4.33□□□□□ -1.72
SEN1YLR430W PEX10Q05568 337 aa4.33□□□□□ -1.72
SEN1YLR430W HER1Q12276 1246 aa4.33□□□□□ -1.72
SEN1YLR430W TRM11Q12463 433 aa4.33□□□□□ -1.72
SEN1YLR430W TUB3P09734 445 aaKnown RBP4.33□□□□□ -1.72
SEN1YLR430W MPH3P0CE00 602 aa4.33□□□□□ -1.72
SEN1YLR430W ISY1P21374 235 aaPredicted RBP4.33□□□□□ -1.72
SEN1YLR430W FRD1P32614 470 aaKnown RBP4.33□□□□□ -1.72
SEN1YLR430W YBR032WP38223 100 aa4.33□□□□□ -1.72
SEN1YLR430W SBE2P42223 864 aaKnown RBP4.33□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms