RNA–Protein interactions for RNA: YLR396C

VPS33, Transcript of ATP-binding protein that is a subunit of the HOPS and CORVET complexes, yeastyeast

Gene VPS33, Length 2,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS33YLR396C CLC1P17891 233 aa4.02□□□□□ -1.77
VPS33YLR396C PLC1P32383 869 aa4.02□□□□□ -1.77
VPS33YLR396C CCT3P39077 534 aaKnown RBP4.02□□□□□ -1.77
VPS33YLR396C NUP60P39705 539 aa4.02□□□□□ -1.77
VPS33YLR396C AIM21P40563 679 aa4.02□□□□□ -1.77
VPS33YLR396C UBC11P52492 156 aa4.02□□□□□ -1.77
VPS33YLR396C PEX14P53112 341 aa4.02□□□□□ -1.77
VPS33YLR396C COX18P53239 316 aa4.02□□□□□ -1.77
VPS33YLR396C SKY1Q03656 742 aa4.02□□□□□ -1.77
VPS33YLR396C SGO1Q08490 590 aa4.02□□□□□ -1.77
VPS33YLR396C SCC2Q04002 1493 aa4.02□□□□□ -1.77
VPS33YLR396C TUB2P02557 457 aaKnown RBP4.01□□□□□ -1.77
VPS33YLR396C PEX1P24004 1043 aa4.01□□□□□ -1.77
VPS33YLR396C BIT2P38346 545 aa4.01□□□□□ -1.77
VPS33YLR396C RSC8P43609 557 aaKnown RBP4.01□□□□□ -1.77
VPS33YLR396C MSE1P48525 536 aa4.01□□□□□ -1.77
VPS33YLR396C STP4Q07351 490 aa4.01□□□□□ -1.77
VPS33YLR396C PUS9Q12069 462 aa4.01□□□□□ -1.77
VPS33YLR396C YPR027CQ12079 277 aa4.01□□□□□ -1.77
VPS33YLR396C NOP56Q12460 504 aaKnown RBP RIP-Chip data4.01□□□□□ -1.77not detected
VPS33YLR396C SIN3P22579 1536 aa4.01□□□□□ -1.77
VPS33YLR396C CFT1Q06632 1357 aaKnown RBP4.01□□□□□ -1.77
VPS33YLR396C PEP1P32319 1579 aa4.01□□□□□ -1.77
VPS33YLR396C SEC6P32844 805 aa4.01□□□□□ -1.77
VPS33YLR396C TFC4P33339 1025 aa4.01□□□□□ -1.77
VPS33YLR396C VID28P40547 921 aa4.01□□□□□ -1.77
VPS33YLR396C BIT61P47041 543 aa4.01□□□□□ -1.77
VPS33YLR396C THI22Q06490 572 aa4.01□□□□□ -1.77
VPS33YLR396C POL1P13382 1468 aa4□□□□□ -1.77
VPS33YLR396C ERG20P08524 352 aaKnown RBP4□□□□□ -1.77
VPS33YLR396C ATP12P22135 325 aa4□□□□□ -1.77
VPS33YLR396C HIR1P32479 840 aa4□□□□□ -1.77
VPS33YLR396C RNR4P49723 345 aaKnown RBP4□□□□□ -1.77
VPS33YLR396C PEX8P53248 589 aa4□□□□□ -1.77
VPS33YLR396C BUD4P47136 1447 aa4□□□□□ -1.77
VPS33YLR396C SIR3P06701 978 aa3.99□□□□□ -1.77
VPS33YLR396C HEM12P32347 362 aaPredicted RBP3.99□□□□□ -1.77
VPS33YLR396C MF(ALPHA)2P32435 120 aa3.99□□□□□ -1.77
VPS33YLR396C CHS7P38843 316 aa3.99□□□□□ -1.77
VPS33YLR396C FMP52P40008 231 aa3.99□□□□□ -1.77
VPS33YLR396C BUD8P41698 603 aa3.99□□□□□ -1.77
VPS33YLR396C DIA2Q08496 732 aaPredicted RBP3.99□□□□□ -1.77
VPS33YLR396C POM34Q12445 299 aa3.99□□□□□ -1.77
VPS33YLR396C TAF2P23255 1407 aa3.99□□□□□ -1.77
VPS33YLR396C COX11P19516 300 aaKnown RBP3.99□□□□□ -1.77
VPS33YLR396C MVD1P32377 396 aaKnown RBP3.99□□□□□ -1.77
VPS33YLR396C HIS7P33734 552 aaKnown RBP3.99□□□□□ -1.77
VPS33YLR396C PPS1P38148 807 aa3.99□□□□□ -1.77
VPS33YLR396C HRB1P38922 454 aaKnown RBP RIP-Chip data3.99□□□□□ -1.77not detected
VPS33YLR396C DUN1P39009 513 aa3.99□□□□□ -1.77
VPS33YLR396C TGL2P54857 326 aa3.99□□□□□ -1.77
VPS33YLR396C VBA4Q04602 768 aaKnown RBP3.99□□□□□ -1.77
VPS33YLR396C SRB8P25648 1427 aa3.99□□□□□ -1.77
VPS33YLR396C MLP2P40457 1679 aa3.98□□□□□ -1.77
VPS33YLR396C ACO1P19414 778 aaKnown RBP RIP-Chip data3.98□□□□□ -1.77not detected
VPS33YLR396C OPY1P38271 328 aa3.98□□□□□ -1.77
VPS33YLR396C PAN2P53010 1115 aaPredicted RBP3.98□□□□□ -1.77
VPS33YLR396C SLD3P53135 668 aa3.98□□□□□ -1.77
VPS33YLR396C SPC105P53148 917 aa3.98□□□□□ -1.77
VPS33YLR396C GSF2Q04697 403 aaKnown RBP3.98□□□□□ -1.77
VPS33YLR396C HXT4P32467 576 aa3.98□□□□□ -1.77
VPS33YLR396C REV7P38927 245 aa3.98□□□□□ -1.77
VPS33YLR396C EMP65P40085 556 aa3.98□□□□□ -1.77
VPS33YLR396C PXA1P41909 870 aa3.98□□□□□ -1.77
VPS33YLR396C YFR016CP43597 1233 aaKnown RBP3.98□□□□□ -1.77
VPS33YLR396C NSE5Q03718 556 aa3.98□□□□□ -1.77
VPS33YLR396C YKL033W-AQ86ZR7 236 aa3.98□□□□□ -1.77
VPS33YLR396C KAR1P11927 433 aa3.97□□□□□ -1.77
VPS33YLR396C KIN82P25341 720 aa3.97□□□□□ -1.77
VPS33YLR396C BCS1P32839 456 aa3.97□□□□□ -1.77
VPS33YLR396C GRX7P38068 203 aa3.97□□□□□ -1.77
VPS33YLR396C SFB3P38810 929 aa3.97□□□□□ -1.77
VPS33YLR396C TAF4P50105 388 aa3.97□□□□□ -1.77
VPS33YLR396C TEL2P53038 688 aa3.97□□□□□ -1.77
VPS33YLR396C FHN1P53279 174 aa3.97□□□□□ -1.77
VPS33YLR396C SLI1P53304 468 aa3.97□□□□□ -1.77
VPS33YLR396C YNL034WP53963 612 aa3.97□□□□□ -1.77
VPS33YLR396C YNL018CP53976 612 aa3.97□□□□□ -1.77
VPS33YLR396C SND1Q04007 877 aa3.97□□□□□ -1.77
VPS33YLR396C HCA4P20448 770 aaKnown RBP3.96□□□□□ -1.77
VPS33YLR396C PRP22P24384 1145 aaKnown RBP3.96□□□□□ -1.77
VPS33YLR396C PRE4P30657 266 aa3.96□□□□□ -1.77
VPS33YLR396C ENP2P48234 707 aaKnown RBP3.96□□□□□ -1.77
VPS33YLR396C PPN1Q04119 674 aa3.96□□□□□ -1.77
VPS33YLR396C PHM6Q05637 104 aa3.96□□□□□ -1.77
VPS33YLR396C ECM38Q05902 660 aaPredicted RBP3.96□□□□□ -1.77
VPS33YLR396C OMS1Q06668 471 aa3.96□□□□□ -1.77
VPS33YLR396C NGL1Q08213 363 aaKnown RBP3.96□□□□□ -1.77
VPS33YLR396C PEX15Q08215 383 aa3.96□□□□□ -1.77
VPS33YLR396C YLR419WQ06698 1435 aaKnown RBP3.96□□□□□ -1.78
VPS33YLR396C ESP1Q03018 1630 aa3.96□□□□□ -1.78
VPS33YLR396C FEN2P25621 512 aaKnown RBP3.96□□□□□ -1.78
VPS33YLR396C PHO11P35842 467 aa3.96□□□□□ -1.78
VPS33YLR396C SRP68P38687 599 aaKnown RBP3.96□□□□□ -1.78
VPS33YLR396C PHO12P38693 467 aa3.96□□□□□ -1.78
VPS33YLR396C RIA1P53893 1110 aa3.96□□□□□ -1.78
VPS33YLR396C MLH3Q12083 715 aa3.96□□□□□ -1.78
VPS33YLR396C ZRT2Q12436 422 aa3.96□□□□□ -1.78
VPS33YLR396C TMA7Q3E764 64 aaKnown RBP3.96□□□□□ -1.78
VPS33YLR396C PAN1P32521 1480 aa3.96□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 38.4 ms