RNA–Protein interactions for RNA: YLR394W

CST9, Transcript of SUMO E3 ligase, yeast

Gene CST9, Length 1,449 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CST9	YLR394W	TOM20	P35180	183 aa		4.2	□□□□□ -1.74
CST9	YLR394W	BUD8	P41698	603 aa		4.2	□□□□□ -1.74
CST9	YLR394W	IES1	P43579	692 aa		4.2	□□□□□ -1.74
CST9	YLR394W	DAS1	P47005	663 aa		4.2	□□□□□ -1.74
CST9	YLR394W	YMR210W	Q03649	449 aa		4.2	□□□□□ -1.74
CST9	YLR394W	VHS3	Q08438	674 aa		4.2	□□□□□ -1.74
CST9	YLR394W	MRH1	Q12117	320 aa	Predicted RBP	4.2	□□□□□ -1.74
CST9	YLR394W	PEX1	P24004	1043 aa		4.19	□□□□□ -1.74
CST9	YLR394W	HEM12	P32347	362 aa	Predicted RBP	4.19	□□□□□ -1.74
CST9	YLR394W	PEX2	P32800	271 aa		4.19	□□□□□ -1.74
CST9	YLR394W	YKR075C	P36155	307 aa		4.19	□□□□□ -1.74
CST9	YLR394W	APT2	P36973	181 aa		4.19	□□□□□ -1.74
CST9	YLR394W	NUP60	P39705	539 aa		4.19	□□□□□ -1.74
CST9	YLR394W	VID28	P40547	921 aa		4.19	□□□□□ -1.74
CST9	YLR394W	TGL2	P54857	326 aa		4.19	□□□□□ -1.74
CST9	YLR394W	CTK1	Q03957	528 aa	Known RBP	4.19	□□□□□ -1.74
CST9	YLR394W	THI22	Q06490	572 aa		4.19	□□□□□ -1.74
CST9	YLR394W	TRE2	Q08693	809 aa		4.19	□□□□□ -1.74
CST9	YLR394W	SIR3	P06701	978 aa		4.18	□□□□□ -1.74
CST9	YLR394W	PET127	P32606	800 aa		4.18	□□□□□ -1.74
CST9	YLR394W	TFC4	P33339	1025 aa		4.18	□□□□□ -1.74
CST9	YLR394W	CCT3	P39077	534 aa	Known RBP	4.18	□□□□□ -1.74
CST9	YLR394W	BIT61	P47041	543 aa		4.18	□□□□□ -1.74
CST9	YLR394W	PTA1	Q01329	785 aa	Predicted RBP	4.18	□□□□□ -1.74
CST9	YLR394W	SGO1	Q08490	590 aa		4.18	□□□□□ -1.74
CST9	YLR394W	SUT2	Q12286	268 aa		4.18	□□□□□ -1.74
CST9	YLR394W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.18	□□□□□ -1.74	not detected
CST9	YLR394W	AEP2	P22136	580 aa		4.17	□□□□□ -1.74
CST9	YLR394W	HIS7	P33734	552 aa	Known RBP	4.17	□□□□□ -1.74
CST9	YLR394W	BIT2	P38346	545 aa		4.17	□□□□□ -1.74
CST9	YLR394W	SFB3	P38810	929 aa		4.17	□□□□□ -1.74
CST9	YLR394W	PAN2	P53010	1115 aa	Predicted RBP	4.17	□□□□□ -1.74
CST9	YLR394W	SKY1	Q03656	742 aa		4.17	□□□□□ -1.74
CST9	YLR394W	MLH3	Q12083	715 aa		4.17	□□□□□ -1.74
CST9	YLR394W	RMP1	Q12530	201 aa		4.17	□□□□□ -1.74
CST9	YLR394W	MVD1	P32377	396 aa	Known RBP	4.16	□□□□□ -1.74
CST9	YLR394W	HXT4	P32467	576 aa		4.16	□□□□□ -1.74
CST9	YLR394W	BCS1	P32839	456 aa		4.16	□□□□□ -1.74
CST9	YLR394W	BFA1	P47113	574 aa		4.16	□□□□□ -1.74
CST9	YLR394W	PEX8	P53248	589 aa		4.16	□□□□□ -1.74
CST9	YLR394W	AFT2	Q08957	416 aa		4.16	□□□□□ -1.74
CST9	YLR394W	YPR027C	Q12079	277 aa		4.16	□□□□□ -1.74
CST9	YLR394W	DNA2	P38859	1522 aa		4.16	□□□□□ -1.74
CST9	YLR394W	COX11	P19516	300 aa	Known RBP	4.15	□□□□□ -1.74
CST9	YLR394W	FEN2	P25621	512 aa	Known RBP	4.15	□□□□□ -1.74
CST9	YLR394W	MF(ALPHA)2	P32435	120 aa		4.15	□□□□□ -1.74
CST9	YLR394W	MTC7	P32633	139 aa		4.15	□□□□□ -1.74
CST9	YLR394W	CDS1	P38221	457 aa		4.15	□□□□□ -1.74
CST9	YLR394W	FMP52	P40008	231 aa		4.15	□□□□□ -1.74
CST9	YLR394W	PEX14	P53112	341 aa		4.15	□□□□□ -1.74
CST9	YLR394W	IMO32	P53219	342 aa		4.15	□□□□□ -1.74
CST9	YLR394W	FHN1	P53279	174 aa		4.15	□□□□□ -1.74
CST9	YLR394W	YNL034W	P53963	612 aa		4.15	□□□□□ -1.74
CST9	YLR394W	YNL018C	P53976	612 aa		4.15	□□□□□ -1.74
CST9	YLR394W	HOF1	Q05080	669 aa		4.15	□□□□□ -1.74
CST9	YLR394W	COQ11	Q05892	277 aa		4.15	□□□□□ -1.74
CST9	YLR394W	ECM38	Q05902	660 aa	Predicted RBP	4.15	□□□□□ -1.74
CST9	YLR394W	NGL1	Q08213	363 aa	Known RBP	4.15	□□□□□ -1.74
CST9	YLR394W	POM34	Q12445	299 aa		4.15	□□□□□ -1.74
CST9	YLR394W	BNR1	P40450	1375 aa		4.15	□□□□□ -1.75
CST9	YLR394W	GFA1	P14742	717 aa	Known RBP	4.14	□□□□□ -1.75
CST9	YLR394W	MSS1	P32559	526 aa	Predicted RBP	4.14	□□□□□ -1.75
CST9	YLR394W	PHO11	P35842	467 aa		4.14	□□□□□ -1.75
CST9	YLR394W	UBS1	P38290	277 aa		4.14	□□□□□ -1.75
CST9	YLR394W	PHO12	P38693	467 aa		4.14	□□□□□ -1.75
CST9	YLR394W	DUN1	P39009	513 aa		4.14	□□□□□ -1.75
CST9	YLR394W	RFX1	P48743	811 aa		4.14	□□□□□ -1.75
CST9	YLR394W	YKL033W-A	Q86ZR7	236 aa		4.14	□□□□□ -1.75
CST9	YLR394W	PRE4	P30657	266 aa		4.13	□□□□□ -1.75
CST9	YLR394W	PPZ2	P33329	710 aa		4.13	□□□□□ -1.75
CST9	YLR394W	TDP1	P38319	544 aa		4.13	□□□□□ -1.75
CST9	YLR394W	PCL5	P38794	229 aa		4.13	□□□□□ -1.75
CST9	YLR394W	EAF5	P39995	279 aa		4.13	□□□□□ -1.75
CST9	YLR394W	YIL077C	P40508	320 aa		4.13	□□□□□ -1.75
CST9	YLR394W	SND1	Q04007	877 aa		4.13	□□□□□ -1.75
CST9	YLR394W	ZRT2	Q12436	422 aa		4.13	□□□□□ -1.75
CST9	YLR394W	ERG20	P08524	352 aa	Known RBP	4.12	□□□□□ -1.75
CST9	YLR394W	THR1	P17423	357 aa	Known RBP	4.12	□□□□□ -1.75
CST9	YLR394W	MDM10	P18409	493 aa		4.12	□□□□□ -1.75
CST9	YLR394W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.12	□□□□□ -1.75	not detected
CST9	YLR394W	COS111	P38308	924 aa		4.12	□□□□□ -1.75
CST9	YLR394W	RIX1	P38883	763 aa	Predicted RBP	4.12	□□□□□ -1.75
CST9	YLR394W	PXA1	P41909	870 aa		4.12	□□□□□ -1.75
CST9	YLR394W	IRC5	P43610	853 aa		4.12	□□□□□ -1.75
CST9	YLR394W	RNR4	P49723	345 aa	Known RBP	4.12	□□□□□ -1.75
CST9	YLR394W	TAF4	P50105	388 aa		4.12	□□□□□ -1.75
CST9	YLR394W	TEL2	P53038	688 aa		4.12	□□□□□ -1.75
CST9	YLR394W	SPC105	P53148	917 aa		4.12	□□□□□ -1.75
CST9	YLR394W	RIA1	P53893	1110 aa		4.12	□□□□□ -1.75
CST9	YLR394W	VBA4	Q04602	768 aa	Known RBP	4.12	□□□□□ -1.75
CST9	YLR394W	YFT2	Q06676	274 aa		4.12	□□□□□ -1.75
CST9	YLR394W	DIA2	Q08496	732 aa	Predicted RBP	4.12	□□□□□ -1.75
CST9	YLR394W	YNL162W-A	Q3E7A8	72 aa		4.12	□□□□□ -1.75
CST9	YLR394W	TUB1	P09733	447 aa	Known RBP	4.12	□□□□□ -1.75
CST9	YLR394W	SET3	P36124	751 aa		4.12	□□□□□ -1.75
CST9	YLR394W	CRG1	P38892	291 aa	RIP-Chip data	4.12	□□□□□ -1.75	not detected
CST9	YLR394W	REV7	P38927	245 aa		4.12	□□□□□ -1.75
CST9	YLR394W	PRM2	P40534	656 aa		4.12	□□□□□ -1.75
CST9	YLR394W	CHS5	Q12114	671 aa	Known RBP	4.12	□□□□□ -1.75
CST9	YLR394W	ICT1	Q12385	394 aa		4.12	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 23 ms