RNA–Protein interactions for RNA: YKR059W

TIF1, Transcript of Translation initiation factor eIF4A, yeast

Gene TIF1, Length 1,188 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIF1	YKR059W	TSR2	Q06672	205 aa	Known RBP	7.2	□□□□□ -1.26
TIF1	YKR059W	YDL176W	Q12027	708 aa		7.2	□□□□□ -1.26
TIF1	YKR059W	ERP4	Q12450	207 aa		7.2	□□□□□ -1.26
TIF1	YKR059W	DBP2	P24783	546 aa	Known RBP	7.19	□□□□□ -1.26
TIF1	YKR059W	CDC48	P25694	835 aa	Known RBP	7.19	□□□□□ -1.26
TIF1	YKR059W	HEM12	P32347	362 aa	Predicted RBP	7.19	□□□□□ -1.26
TIF1	YKR059W	PGM2	P37012	569 aa	Known RBP	7.19	□□□□□ -1.26
TIF1	YKR059W	RTS1	P38903	757 aa		7.19	□□□□□ -1.26
TIF1	YKR059W	CCT5	P40413	562 aa	Known RBP	7.19	□□□□□ -1.26
TIF1	YKR059W	TMA108	P40462	946 aa		7.19	□□□□□ -1.26
TIF1	YKR059W	IRC8	P47046	822 aa		7.19	□□□□□ -1.26
TIF1	YKR059W	YLL058W	Q12198	575 aa		7.19	□□□□□ -1.26
TIF1	YKR059W	YDR034W-B	Q6Q5X2	51 aa		7.19	□□□□□ -1.26
TIF1	YKR059W	HCA4	P20448	770 aa	Known RBP	7.18	□□□□□ -1.26
TIF1	YKR059W	CHS3	P29465	1165 aa		7.18	□□□□□ -1.26
TIF1	YKR059W	NNK1	P36003	928 aa		7.18	□□□□□ -1.26
TIF1	YKR059W	OSH3	P38713	996 aa	Known RBP	7.18	□□□□□ -1.26
TIF1	YKR059W	RRP8	P38961	392 aa	Known RBP	7.18	□□□□□ -1.26
TIF1	YKR059W	YPR196W	Q06595	470 aa		7.18	□□□□□ -1.26
TIF1	YKR059W	NEW1	Q08972	1196 aa	Known RBP	7.18	□□□□□ -1.26
TIF1	YKR059W	ELG1	Q12050	791 aa		7.18	□□□□□ -1.26
TIF1	YKR059W	RFA1	P22336	621 aa	Known RBP	7.17	□□□□□ -1.26
TIF1	YKR059W	NPP1	P25353	742 aa		7.17	□□□□□ -1.26
TIF1	YKR059W	UTR4	P32626	227 aa		7.17	□□□□□ -1.26
TIF1	YKR059W	AFR1	P33304	620 aa		7.17	□□□□□ -1.26
TIF1	YKR059W	MAE1	P36013	669 aa	Known RBP	7.17	□□□□□ -1.26
TIF1	YKR059W	KTR3	P38130	404 aa	Predicted RBP	7.17	□□□□□ -1.26
TIF1	YKR059W	KTR4	P38131	464 aa		7.17	□□□□□ -1.26
TIF1	YKR059W	YER158C	P40095	573 aa		7.17	□□□□□ -1.26
TIF1	YKR059W	SHR5	P41912	237 aa		7.17	□□□□□ -1.26
TIF1	YKR059W	SRB7	P47822	140 aa		7.17	□□□□□ -1.26
TIF1	YKR059W	RNR4	P49723	345 aa	Known RBP	7.17	□□□□□ -1.26
TIF1	YKR059W	UBA2	P52488	636 aa		7.17	□□□□□ -1.26
TIF1	YKR059W	MLC1	P53141	149 aa		7.17	□□□□□ -1.26
TIF1	YKR059W	SPO1	P53541	631 aa		7.17	□□□□□ -1.26
TIF1	YKR059W	YNR014W	P53719	212 aa		7.17	□□□□□ -1.26
TIF1	YKR059W	NOG2	P53742	486 aa	Known RBP	7.17	□□□□□ -1.26
TIF1	YKR059W	CAF120	P53836	1060 aa		7.17	□□□□□ -1.26
TIF1	YKR059W	ADE12	P80210	433 aa	Known RBP	7.17	□□□□□ -1.26
TIF1	YKR059W	TY1A-DR2	Q03964	440 aa	Known RBP	7.17	□□□□□ -1.26
TIF1	YKR059W	YHM2	Q04013	314 aa		7.17	□□□□□ -1.26
TIF1	YKR059W	YLR257W	Q06146	321 aa	Known RBP	7.17	□□□□□ -1.26
TIF1	YKR059W	OPY2	Q06810	360 aa		7.17	□□□□□ -1.26
TIF1	YKR059W	YPL277C	Q08989	487 aa		7.17	□□□□□ -1.26
TIF1	YKR059W	ECM29	P38737	1868 aa		7.16	□□□□□ -1.26
TIF1	YKR059W	DAL3	P32459	195 aa		7.16	□□□□□ -1.26
TIF1	YKR059W	SLA2	P33338	968 aa		7.16	□□□□□ -1.26
TIF1	YKR059W	ENP2	P48234	707 aa	Known RBP	7.16	□□□□□ -1.26
TIF1	YKR059W	SCW11	P53189	542 aa		7.16	□□□□□ -1.26
TIF1	YKR059W	ECM9	Q02202	377 aa		7.16	□□□□□ -1.26
TIF1	YKR059W	HOS3	Q02959	697 aa	Known RBP	7.16	□□□□□ -1.26
TIF1	YKR059W	SPC19	Q03954	165 aa		7.16	□□□□□ -1.26
TIF1	YKR059W	HRQ1	Q05549	1077 aa		7.16	□□□□□ -1.26
TIF1	YKR059W	ISA1	Q07821	250 aa	Predicted RBP	7.16	□□□□□ -1.26
TIF1	YKR059W	YOR223W	Q12015	292 aa		7.16	□□□□□ -1.26
TIF1	YKR059W	RAD61	Q99359	647 aa		7.16	□□□□□ -1.26
TIF1	YKR059W	TOR2	P32600	2474 aa	Known RBP	7.15	□□□□□ -1.26
TIF1	YKR059W	TGL1	P34163	548 aa		7.15	□□□□□ -1.26
TIF1	YKR059W	BLI1	P35727	113 aa		7.15	□□□□□ -1.26
TIF1	YKR059W	SAP190	P36123	1033 aa		7.15	□□□□□ -1.26
TIF1	YKR059W	POA1	P38218	177 aa		7.15	□□□□□ -1.26
TIF1	YKR059W	PHO88	P38264	188 aa	Predicted RBP	7.15	□□□□□ -1.26
TIF1	YKR059W	MNT3	P40549	630 aa		7.15	□□□□□ -1.26
TIF1	YKR059W	SKP2	P42843	763 aa		7.15	□□□□□ -1.26
TIF1	YKR059W	BNA2	P47125	453 aa		7.15	□□□□□ -1.26
TIF1	YKR059W	NPY1	P53164	384 aa		7.15	□□□□□ -1.26
TIF1	YKR059W	TNA1	P53322	534 aa		7.15	□□□□□ -1.26
TIF1	YKR059W	HOL1	P53389	586 aa		7.15	□□□□□ -1.26
TIF1	YKR059W	RVB2	Q12464	471 aa	Known RBP	7.15	□□□□□ -1.26
TIF1	YKR059W	DIF1	O13577	133 aa		7.14	□□□□□ -1.27
TIF1	YKR059W	NOT3	P06102	836 aa	Known RBP	7.14	□□□□□ -1.27
TIF1	YKR059W	MSH1	P25846	959 aa		7.14	□□□□□ -1.27
TIF1	YKR059W	MCM4	P30665	933 aa	Known RBP	7.14	□□□□□ -1.27
TIF1	YKR059W	NAM7	P30771	971 aa	Known RBP	7.14	□□□□□ -1.27
TIF1	YKR059W	CCR4	P31384	837 aa	Known RBP	7.14	□□□□□ -1.27
TIF1	YKR059W	GPT2	P36148	743 aa		7.14	□□□□□ -1.27
TIF1	YKR059W	TSL1	P38427	1098 aa	Known RBP	7.14	□□□□□ -1.27
TIF1	YKR059W	PPE1	P38796	400 aa		7.14	□□□□□ -1.27
TIF1	YKR059W	YHR131C	P38835	850 aa		7.14	□□□□□ -1.27
TIF1	YKR059W	RLP7	P40693	322 aa	Known RBP	7.14	□□□□□ -1.27
TIF1	YKR059W	YFL052W	P43551	465 aa		7.14	□□□□□ -1.27
TIF1	YKR059W	CNM67	P53865	581 aa	Known RBP	7.14	□□□□□ -1.27
TIF1	YKR059W	VPS30	Q02948	557 aa		7.14	□□□□□ -1.27
TIF1	YKR059W	YDR338C	Q05497	695 aa		7.14	□□□□□ -1.27
TIF1	YKR059W	SPH1	Q06160	661 aa		7.14	□□□□□ -1.27
TIF1	YKR059W	YDR461C-A	Q2V2P7	80 aa		7.14	□□□□□ -1.27
TIF1	YKR059W	RPS9A	O13516	197 aa	Known RBP	7.13	□□□□□ -1.27
TIF1	YKR059W	HIP1	P06775	603 aa		7.13	□□□□□ -1.27
TIF1	YKR059W	POX1	P13711	748 aa		7.13	□□□□□ -1.27
TIF1	YKR059W	APA1	P16550	321 aa	Known RBP	7.13	□□□□□ -1.27
TIF1	YKR059W	DAL7	P21826	554 aa		7.13	□□□□□ -1.27
TIF1	YKR059W	RER1	P25560	188 aa		7.13	□□□□□ -1.27
TIF1	YKR059W	YUR1	P26725	428 aa		7.13	□□□□□ -1.27
TIF1	YKR059W	GLY1	P37303	387 aa	Known RBP	7.13	□□□□□ -1.27
TIF1	YKR059W	TED1	P40533	473 aa		7.13	□□□□□ -1.27
TIF1	YKR059W	FOL2	P51601	243 aa	Known RBP	7.13	□□□□□ -1.27
TIF1	YKR059W	TAD1	P53065	400 aa		7.13	□□□□□ -1.27
TIF1	YKR059W	DOT1	Q04089	582 aa	Known RBP	7.13	□□□□□ -1.27
TIF1	YKR059W	BLS1	Q06071	122 aa		7.13	□□□□□ -1.27
TIF1	YKR059W	OPT2	Q06593	877 aa		7.13	□□□□□ -1.27

Retrieved 100 of 5,963 RNA–protein pairs in 22.6 ms