RNA–Protein interactions for RNA: YKR043C

SHB17, Transcript of Sedoheptulose bisphosphatase involved in riboneogenesis, yeastyeast

Gene SHB17, Length 816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHB17YKR043C NDJ1Q12366 352 aa10.79□□□□□ -0.68
SHB17YKR043C VMA4P22203 233 aaKnown RBP10.78□□□□□ -0.68
SHB17YKR043C SPT5P27692 1063 aaKnown RBP10.78□□□□□ -0.68
SHB17YKR043C DUG2P38149 878 aa10.78□□□□□ -0.68
SHB17YKR043C QNS1P38795 714 aaKnown RBP10.78□□□□□ -0.68
SHB17YKR043C AVT2P39981 480 aa10.78□□□□□ -0.68
SHB17YKR043C CDC1P40986 491 aa10.78□□□□□ -0.68
SHB17YKR043C MTD1Q02046 320 aaKnown RBP10.78□□□□□ -0.68
SHB17YKR043C GCN5Q03330 439 aa10.78□□□□□ -0.68
SHB17YKR043C BSP1Q06604 576 aa10.78□□□□□ -0.68
SHB17YKR043C BI2P03873 423 aa10.77□□□□□ -0.69
SHB17YKR043C BI4P03879 638 aa10.77□□□□□ -0.69
SHB17YKR043C MTF1P14908 341 aaKnown RBP10.77□□□□□ -0.69
SHB17YKR043C RAM1P22007 431 aa10.77□□□□□ -0.69
SHB17YKR043C MCM2P29469 868 aa10.77□□□□□ -0.69
SHB17YKR043C RRN6P32786 894 aa10.77□□□□□ -0.69
SHB17YKR043C COY1P34237 679 aa10.77□□□□□ -0.69
SHB17YKR043C YKL097CP34245 136 aa10.77□□□□□ -0.69
SHB17YKR043C CAB3P36076 571 aa10.77□□□□□ -0.69
SHB17YKR043C YBR225WP38321 900 aa10.77□□□□□ -0.69
SHB17YKR043C YDR222WQ04925 415 aa10.77□□□□□ -0.69
SHB17YKR043C HRD3Q05787 833 aa10.77□□□□□ -0.69
SHB17YKR043C APC5Q08683 685 aa10.77□□□□□ -0.69
SHB17YKR043C EMP46Q12396 444 aa10.77□□□□□ -0.69
SHB17YKR043C BI3Q9ZZW7 517 aa10.77□□□□□ -0.69
SHB17YKR043C AEP2P22136 580 aa10.76□□□□□ -0.69
SHB17YKR043C DAL1P32375 460 aa10.76□□□□□ -0.69
SHB17YKR043C YKL050CP35736 922 aa10.76□□□□□ -0.69
SHB17YKR043C BCH2P36122 765 aa10.76□□□□□ -0.69
SHB17YKR043C TDA3P38758 523 aa10.76□□□□□ -0.69
SHB17YKR043C STU2P46675 888 aa10.76□□□□□ -0.69
SHB17YKR043C TAF9Q05027 157 aa10.76□□□□□ -0.69
SHB17YKR043C OPY2Q06810 360 aa10.76□□□□□ -0.69
SHB17YKR043C EST1P17214 699 aaPredicted RBP10.75□□□□□ -0.69
SHB17YKR043C RGR1P19263 1082 aa10.75□□□□□ -0.69
SHB17YKR043C NUP60P39705 539 aa10.75□□□□□ -0.69
SHB17YKR043C YGR111WP53265 400 aa10.75□□□□□ -0.69
SHB17YKR043C YOR059CQ08448 450 aaKnown RBP10.75□□□□□ -0.69
SHB17YKR043C MTF2P10849 440 aa10.74□□□□□ -0.69
SHB17YKR043C STE11P23561 717 aa10.74□□□□□ -0.69
SHB17YKR043C PPH22P23595 377 aa10.74□□□□□ -0.69
SHB17YKR043C PUP3P25451 205 aaKnown RBP10.74□□□□□ -0.69
SHB17YKR043C PRK1P40494 810 aa10.74□□□□□ -0.69
SHB17YKR043C SNZ3P43545 298 aa10.74□□□□□ -0.69
SHB17YKR043C VTC4P47075 721 aa10.74□□□□□ -0.69
SHB17YKR043C YMR1P47147 688 aaKnown RBP RIP-Chip data10.74□□□□□ -0.69not detected
SHB17YKR043C SNZ2P53824 298 aa10.74□□□□□ -0.69
SHB17YKR043C SYH1Q02875 849 aaKnown RBP10.74□□□□□ -0.69
SHB17YKR043C UTP5Q04177 643 aaKnown RBP10.74□□□□□ -0.69
SHB17YKR043C IRC10Q08118 586 aa10.74□□□□□ -0.69
SHB17YKR043C PUT4P15380 627 aa10.73□□□□□ -0.69
SHB17YKR043C KAR3P17119 729 aa10.73□□□□□ -0.69
SHB17YKR043C RRP43P25359 394 aaPredicted RBP10.73□□□□□ -0.69
SHB17YKR043C SRB2P34162 210 aa10.73□□□□□ -0.69
SHB17YKR043C YBR053CP38235 358 aa10.73□□□□□ -0.69
SHB17YKR043C SSP1P38871 571 aa10.73□□□□□ -0.69
SHB17YKR043C YMR124WP39523 943 aaKnown RBP10.73□□□□□ -0.69
SHB17YKR043C YGR021WP53212 290 aa10.73□□□□□ -0.69
SHB17YKR043C LCB4Q12246 624 aa10.73□□□□□ -0.69
SHB17YKR043C NCL1P38205 684 aaKnown RBP10.72□□□□□ -0.69
SHB17YKR043C SET5P38890 526 aaKnown RBP10.72□□□□□ -0.69
SHB17YKR043C YER189WP40104 122 aa10.72□□□□□ -0.69
SHB17YKR043C GYL1Q04322 720 aa10.72□□□□□ -0.69
SHB17YKR043C VPS38Q05919 439 aa10.72□□□□□ -0.69
SHB17YKR043C YCG1Q06680 1035 aa10.72□□□□□ -0.69
SHB17YKR043C AIM39Q08223 395 aa10.72□□□□□ -0.69
SHB17YKR043C SIR1P21691 654 aa10.71□□□□□ -0.69
SHB17YKR043C POL12P38121 705 aaPredicted RBP10.71□□□□□ -0.69
SHB17YKR043C HSL7P38274 827 aa10.71□□□□□ -0.69
SHB17YKR043C TUB4P53378 473 aa10.71□□□□□ -0.69
SHB17YKR043C YMR018WQ04364 514 aa10.71□□□□□ -0.69
SHB17YKR043C SPG3Q04398 127 aaPredicted RBP10.71□□□□□ -0.69
SHB17YKR043C TMN2Q04562 672 aa10.71□□□□□ -0.69
SHB17YKR043C PDH1Q12428 516 aaKnown RBP10.71□□□□□ -0.69
SHB17YKR043C SGF29P25554 259 aa10.7□□□□□ -0.7
SHB17YKR043C SEC1P30619 724 aaKnown RBP10.7□□□□□ -0.7
SHB17YKR043C SPC110P32380 944 aa10.7□□□□□ -0.7
SHB17YKR043C HSP78P33416 811 aa10.7□□□□□ -0.7
SHB17YKR043C PCH2P38126 564 aa10.7□□□□□ -0.7
SHB17YKR043C ECM13P38195 257 aa10.7□□□□□ -0.7
SHB17YKR043C DSF2P38213 736 aa10.7□□□□□ -0.7
SHB17YKR043C PSY2P40164 858 aa10.7□□□□□ -0.7
SHB17YKR043C YIL161WP40449 235 aaKnown RBP10.7□□□□□ -0.7
SHB17YKR043C YHM2Q04013 314 aa10.7□□□□□ -0.7
SHB17YKR043C SXM1Q04175 944 aaKnown RBP10.7□□□□□ -0.7
SHB17YKR043C ERV41Q04651 352 aa10.7□□□□□ -0.7
SHB17YKR043C AIM32Q04689 311 aa10.7□□□□□ -0.7
SHB17YKR043C SIL1Q08199 421 aa10.7□□□□□ -0.7
SHB17YKR043C THI20Q08224 551 aa10.7□□□□□ -0.7
SHB17YKR043C LPX1Q12405 387 aaKnown RBP10.7□□□□□ -0.7
SHB17YKR043C CCH1P50077 2039 aa10.69□□□□□ -0.7
SHB17YKR043C CCP1P00431 361 aa10.69□□□□□ -0.7
SHB17YKR043C RAD57P25301 460 aa10.69□□□□□ -0.7
SHB17YKR043C ABD1P32783 436 aaPredicted RBP10.69□□□□□ -0.7
SHB17YKR043C TMN3P40071 706 aa10.69□□□□□ -0.7
SHB17YKR043C ALF1P53904 254 aa10.69□□□□□ -0.7
SHB17YKR043C YNL144CP53907 740 aa10.69□□□□□ -0.7
SHB17YKR043C FAP1P53971 965 aa10.69□□□□□ -0.7
SHB17YKR043C CTR9P89105 1077 aa10.69□□□□□ -0.7
SHB17YKR043C PIR3Q03180 325 aa10.69□□□□□ -0.7
Retrieved 100 of 5,963 RNA–protein pairs in 24.5 ms