RNA–Protein interactions for RNA: YKR040C

YKR040C, Transcript of Dubious open reading frame, yeastyeast

Gene YKR040C, Length 504 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YKR040CYKR040C VTC4P47075 721 aa12.3□□□□□ -0.44
YKR040CYKR040C ECM22Q05958 814 aaPredicted RBP12.3□□□□□ -0.44
YKR040CYKR040C HMI1Q12039 706 aa12.3□□□□□ -0.44
YKR040CYKR040C CCH1P50077 2039 aa12.3□□□□□ -0.44
YKR040CYKR040C AEP2P22136 580 aa12.29□□□□□ -0.44
YKR040CYKR040C PUP3P25451 205 aaKnown RBP12.29□□□□□ -0.44
YKR040CYKR040C DSS4P32601 143 aa12.29□□□□□ -0.44
YKR040CYKR040C MPE1P35728 441 aaKnown RBP12.29□□□□□ -0.44
YKR040CYKR040C STR2P47164 639 aa12.29□□□□□ -0.44
YKR040CYKR040C TAF9Q05027 157 aa12.29□□□□□ -0.44
YKR040CYKR040C DIS3Q08162 1001 aaKnown RBP12.29□□□□□ -0.44
YKR040CYKR040C DAL1P32375 460 aa12.28□□□□□ -0.44
YKR040CYKR040C ISF1P32488 338 aa12.28□□□□□ -0.44
YKR040CYKR040C RRN6P32786 894 aa12.28□□□□□ -0.44
YKR040CYKR040C MRP4P32902 394 aa12.28□□□□□ -0.44
YKR040CYKR040C ABZ1P37254 787 aaPredicted RBP12.28□□□□□ -0.44
YKR040CYKR040C DUG2P38149 878 aa12.28□□□□□ -0.44
YKR040CYKR040C NUP60P39705 539 aa12.28□□□□□ -0.44
YKR040CYKR040C PUS2P53167 370 aa12.28□□□□□ -0.44
YKR040CYKR040C BSP1Q06604 576 aa12.28□□□□□ -0.44
YKR040CYKR040C OPY2Q06810 360 aa12.28□□□□□ -0.44
YKR040CYKR040C YBR053CP38235 358 aa12.27□□□□□ -0.45
YKR040CYKR040C HRD3Q05787 833 aa12.27□□□□□ -0.45
YKR040CYKR040C IRC10Q08118 586 aa12.27□□□□□ -0.45
YKR040CYKR040C EMP46Q12396 444 aa12.27□□□□□ -0.45
YKR040CYKR040C RGR1P19263 1082 aa12.26□□□□□ -0.45
YKR040CYKR040C STE11P23561 717 aa12.26□□□□□ -0.45
YKR040CYKR040C PPH22P23595 377 aa12.26□□□□□ -0.45
YKR040CYKR040C YKL050CP35736 922 aa12.26□□□□□ -0.45
YKR040CYKR040C STU2P46675 888 aa12.26□□□□□ -0.45
YKR040CYKR040C YPL062WQ02781 134 aa12.26□□□□□ -0.45
YKR040CYKR040C NEW1Q08972 1196 aaKnown RBP12.26□□□□□ -0.45
YKR040CYKR040C BI2P03873 423 aa12.25□□□□□ -0.45
YKR040CYKR040C BI4P03879 638 aa12.25□□□□□ -0.45
YKR040CYKR040C SGF29P25554 259 aa12.25□□□□□ -0.45
YKR040CYKR040C TDA3P38758 523 aa12.25□□□□□ -0.45
YKR040CYKR040C SSP1P38871 571 aa12.25□□□□□ -0.45
YKR040CYKR040C SFB2P53953 876 aa12.25□□□□□ -0.45
YKR040CYKR040C YDR222WQ04925 415 aa12.25□□□□□ -0.45
YKR040CYKR040C YOR059CQ08448 450 aaKnown RBP12.25□□□□□ -0.45
YKR040CYKR040C PDH1Q12428 516 aaKnown RBP12.25□□□□□ -0.45
YKR040CYKR040C BI3Q9ZZW7 517 aa12.25□□□□□ -0.45
YKR040CYKR040C POL12P38121 705 aaPredicted RBP12.24□□□□□ -0.45
YKR040CYKR040C ATG3P40344 310 aa12.24□□□□□ -0.45
YKR040CYKR040C ART5P53244 586 aaKnown RBP12.24□□□□□ -0.45
YKR040CYKR040C KAR3P17119 729 aa12.23□□□□□ -0.45
YKR040CYKR040C YIL161WP40449 235 aaKnown RBP12.23□□□□□ -0.45
YKR040CYKR040C SNZ3P43545 298 aa12.23□□□□□ -0.45
YKR040CYKR040C YMR1P47147 688 aaKnown RBP RIP-Chip data12.23□□□□□ -0.45not detected
YKR040CYKR040C YGR111WP53265 400 aa12.23□□□□□ -0.45
YKR040CYKR040C BIO5P53744 561 aaKnown RBP12.23□□□□□ -0.45
YKR040CYKR040C SNZ2P53824 298 aa12.23□□□□□ -0.45
YKR040CYKR040C ERG5P54781 538 aa12.23□□□□□ -0.45
YKR040CYKR040C UTP5Q04177 643 aaKnown RBP12.23□□□□□ -0.45
YKR040CYKR040C SPG3Q04398 127 aaPredicted RBP12.23□□□□□ -0.45
YKR040CYKR040C AIM39Q08223 395 aa12.23□□□□□ -0.45
YKR040CYKR040C APL4Q12028 832 aa12.23□□□□□ -0.45
YKR040CYKR040C LPX1Q12405 387 aaKnown RBP12.23□□□□□ -0.45
YKR040CYKR040C HIS5P07172 385 aa12.22□□□□□ -0.45
YKR040CYKR040C SIR1P21691 654 aa12.22□□□□□ -0.45
YKR040CYKR040C HSP78P33416 811 aa12.22□□□□□ -0.45
YKR040CYKR040C SRB2P34162 210 aa12.22□□□□□ -0.45
YKR040CYKR040C YMR124WP39523 943 aaKnown RBP12.22□□□□□ -0.45
YKR040CYKR040C PRK1P40494 810 aa12.22□□□□□ -0.45
YKR040CYKR040C YHM2Q04013 314 aa12.22□□□□□ -0.45
YKR040CYKR040C ARP7Q12406 477 aa12.22□□□□□ -0.45
YKR040CYKR040C RPS14AP06367 137 aaKnown RBP12.21□□□□□ -0.45
YKR040CYKR040C PUT4P15380 627 aa12.21□□□□□ -0.45
YKR040CYKR040C EST1P17214 699 aaPredicted RBP12.21□□□□□ -0.45
YKR040CYKR040C ATG12P38316 186 aa12.21□□□□□ -0.45
YKR040CYKR040C RPS14BP39516 138 aaKnown RBP12.21□□□□□ -0.45
YKR040CYKR040C TUB4P53378 473 aa12.21□□□□□ -0.45
YKR040CYKR040C FAP1P53971 965 aa12.21□□□□□ -0.45
YKR040CYKR040C PMT7Q06644 662 aa12.21□□□□□ -0.45
YKR040CYKR040C THI20Q08224 551 aa12.21□□□□□ -0.45
YKR040CYKR040C MTF2P10849 440 aa12.2□□□□□ -0.46
YKR040CYKR040C RRP43P25359 394 aaPredicted RBP12.2□□□□□ -0.46
YKR040CYKR040C MCM2P29469 868 aa12.2□□□□□ -0.46
YKR040CYKR040C EBP2P36049 427 aaKnown RBP12.2□□□□□ -0.46
YKR040CYKR040C PSY2P40164 858 aa12.2□□□□□ -0.46
YKR040CYKR040C YGR021WP53212 290 aa12.2□□□□□ -0.46
YKR040CYKR040C SYH1Q02875 849 aaKnown RBP12.2□□□□□ -0.46
YKR040CYKR040C SXM1Q04175 944 aaKnown RBP12.2□□□□□ -0.46
YKR040CYKR040C NSE1Q07913 336 aa12.2□□□□□ -0.46
YKR040CYKR040C YRR1Q12172 810 aa12.2□□□□□ -0.46
YKR040CYKR040C CCP1P00431 361 aa12.19□□□□□ -0.46
YKR040CYKR040C NCL1P38205 684 aaKnown RBP12.19□□□□□ -0.46
YKR040CYKR040C HSL7P38274 827 aa12.19□□□□□ -0.46
YKR040CYKR040C MED6P38782 295 aa12.19□□□□□ -0.46
YKR040CYKR040C YER189WP40104 122 aa12.19□□□□□ -0.46
YKR040CYKR040C SAP185P40856 1058 aa12.19□□□□□ -0.46
YKR040CYKR040C TMN2Q04562 672 aa12.19□□□□□ -0.46
YKR040CYKR040C ERV41Q04651 352 aa12.19□□□□□ -0.46
YKR040CYKR040C VPS38Q05919 439 aa12.19□□□□□ -0.46
YKR040CYKR040C YCG1Q06680 1035 aa12.19□□□□□ -0.46
YKR040CYKR040C LCB4Q12246 624 aa12.19□□□□□ -0.46
YKR040CYKR040C VPS5Q92331 675 aa12.19□□□□□ -0.46
YKR040CYKR040C SEC1P30619 724 aaKnown RBP12.18□□□□□ -0.46
YKR040CYKR040C PSE1P32337 1089 aaKnown RBP12.18□□□□□ -0.46
YKR040CYKR040C SPC110P32380 944 aa12.18□□□□□ -0.46
Retrieved 100 of 5,963 RNA–protein pairs in 148.1 ms