RNA–Protein interactions for RNA: YJL192C

SOP4, Transcript of ER-membrane protein, yeast

Gene SOP4, Length 705 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SOP4	YJL192C	YKR011C	Q02209	353 aa		4.22	□□□□□ -1.73
SOP4	YJL192C	GIS1	Q03833	894 aa		4.22	□□□□□ -1.73
SOP4	YJL192C	PSK2	Q08217	1101 aa		4.22	□□□□□ -1.73
SOP4	YJL192C	YOL073C	Q08232	322 aa		4.22	□□□□□ -1.73
SOP4	YJL192C	ABP140	Q08641	628 aa	Known RBP	4.22	□□□□□ -1.73
SOP4	YJL192C	FBP1	P09201	348 aa		4.21	□□□□□ -1.74
SOP4	YJL192C	TUB3	P09734	445 aa	Known RBP	4.21	□□□□□ -1.74
SOP4	YJL192C	CBF5	P33322	483 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
SOP4	YJL192C	MFT1	P33441	392 aa	Known RBP	4.21	□□□□□ -1.74
SOP4	YJL192C	PET10	P36139	283 aa		4.21	□□□□□ -1.74
SOP4	YJL192C	MOH1	P38191	138 aa		4.21	□□□□□ -1.74
SOP4	YJL192C	OCA5	P38738	679 aa		4.21	□□□□□ -1.74
SOP4	YJL192C	PXA1	P41909	870 aa		4.21	□□□□□ -1.74
SOP4	YJL192C	TIM54	P47045	478 aa		4.21	□□□□□ -1.74
SOP4	YJL192C	YGL081W	P53156	320 aa		4.21	□□□□□ -1.74
SOP4	YJL192C	ERP6	P53198	216 aa		4.21	□□□□□ -1.74
SOP4	YJL192C	UTP8	P53276	713 aa	Known RBP	4.21	□□□□□ -1.74
SOP4	YJL192C	OMS1	Q06668	471 aa		4.21	□□□□□ -1.74
SOP4	YJL192C	PPM2	Q08282	695 aa		4.21	□□□□□ -1.74
SOP4	YJL192C	YPL225W	Q08971	146 aa	Known RBP	4.21	□□□□□ -1.74
SOP4	YJL192C	TAD3	Q9URQ3	322 aa		4.21	□□□□□ -1.74
SOP4	YJL192C	RPS9A	O13516	197 aa	Known RBP	4.2	□□□□□ -1.74
SOP4	YJL192C	CPA2	P03965	1118 aa	Known RBP	4.2	□□□□□ -1.74
SOP4	YJL192C	GPA1	P08539	472 aa		4.2	□□□□□ -1.74
SOP4	YJL192C	PHO13	P19881	312 aa		4.2	□□□□□ -1.74
SOP4	YJL192C	RPO26	P20435	155 aa		4.2	□□□□□ -1.74
SOP4	YJL192C	UBC1	P21734	215 aa	Known RBP	4.2	□□□□□ -1.74
SOP4	YJL192C	SEC14	P24280	304 aa	Known RBP	4.2	□□□□□ -1.74
SOP4	YJL192C	ERG4	P25340	473 aa		4.2	□□□□□ -1.74
SOP4	YJL192C	CDC11	P32458	415 aa		4.2	□□□□□ -1.74
SOP4	YJL192C	YSW1	P38280	609 aa		4.2	□□□□□ -1.74
SOP4	YJL192C	YHL017W	P38745	532 aa		4.2	□□□□□ -1.74
SOP4	YJL192C	CTF8	P38877	133 aa		4.2	□□□□□ -1.74
SOP4	YJL192C	YGL242C	P53066	181 aa		4.2	□□□□□ -1.74
SOP4	YJL192C	ARP5	P53946	755 aa		4.2	□□□□□ -1.74
SOP4	YJL192C	ERG5	P54781	538 aa		4.2	□□□□□ -1.74
SOP4	YJL192C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	RIP-Chip
SOP4	YJL192C	ERV41	Q04651	352 aa		4.2	□□□□□ -1.74
SOP4	YJL192C	YCG1	Q06680	1035 aa		4.2	□□□□□ -1.74
SOP4	YJL192C	SPO75	Q07798	868 aa		4.2	□□□□□ -1.74
SOP4	YJL192C	ENV7	Q12003	364 aa		4.2	□□□□□ -1.74
SOP4	YJL192C	TRP4	P07285	380 aa	Predicted RBP	4.19	□□□□□ -1.74
SOP4	YJL192C	PRP4	P20053	465 aa	Known RBP	4.19	□□□□□ -1.74
SOP4	YJL192C	MRPS28	P21771	286 aa		4.19	□□□□□ -1.74
SOP4	YJL192C	RDS1	P25611	832 aa		4.19	□□□□□ -1.74
SOP4	YJL192C	GSY2	P27472	705 aa		4.19	□□□□□ -1.74
SOP4	YJL192C	NFU1	P32860	256 aa		4.19	□□□□□ -1.74
SOP4	YJL192C	CCT4	P39078	528 aa	Known RBP	4.19	□□□□□ -1.74
SOP4	YJL192C	NDC80	P40460	691 aa		4.19	□□□□□ -1.74
SOP4	YJL192C	HUL4	P40985	892 aa		4.19	□□□□□ -1.74
SOP4	YJL192C	MRPS35	P53292	345 aa		4.19	□□□□□ -1.74
SOP4	YJL192C	VPS75	P53853	264 aa		4.19	□□□□□ -1.74
SOP4	YJL192C	NCS2	P53923	493 aa	Predicted RBP	4.19	□□□□□ -1.74
SOP4	YJL192C	WAR1	Q03631	944 aa		4.19	□□□□□ -1.74
SOP4	YJL192C	STE23	Q06010	1027 aa		4.19	□□□□□ -1.74
SOP4	YJL192C	RIM20	Q12033	661 aa		4.19	□□□□□ -1.74
SOP4	YJL192C	HAL9	Q12180	1030 aa		4.19	□□□□□ -1.74
SOP4	YJL192C	OSH2	Q12451	1283 aa		4.19	□□□□□ -1.74
SOP4	YJL192C	YOL098C	Q12496	1037 aa		4.19	□□□□□ -1.74
SOP4	YJL192C	MPH2	P0CD99	609 aa		4.18	□□□□□ -1.74
SOP4	YJL192C	KAR3	P17119	729 aa		4.18	□□□□□ -1.74
SOP4	YJL192C	OAR1	P35731	278 aa		4.18	□□□□□ -1.74
SOP4	YJL192C	YKT6	P36015	200 aa	Known RBP	4.18	□□□□□ -1.74
SOP4	YJL192C	MAL33	P38157	468 aa		4.18	□□□□□ -1.74
SOP4	YJL192C	GDT1	P38301	280 aa	Predicted RBP	4.18	□□□□□ -1.74
SOP4	YJL192C	YER130C	P39959	443 aa		4.18	□□□□□ -1.74
SOP4	YJL192C	CTF18	P49956	741 aa		4.18	□□□□□ -1.74
SOP4	YJL192C	PUS2	P53167	370 aa		4.18	□□□□□ -1.74
SOP4	YJL192C	YGR125W	P53273	1036 aa		4.18	□□□□□ -1.74
SOP4	YJL192C	MUK1	Q02866	612 aa		4.18	□□□□□ -1.74
SOP4	YJL192C	RBA50	Q04418	439 aa		4.18	□□□□□ -1.74
SOP4	YJL192C	ORM2	Q06144	216 aa		4.18	□□□□□ -1.74
SOP4	YJL192C	MATALPHA2	P0CY08	210 aa		4.17	□□□□□ -1.74
SOP4	YJL192C	HMLALPHA2	P0CY09	210 aa		4.17	□□□□□ -1.74
SOP4	YJL192C	PMR1	P13586	950 aa		4.17	□□□□□ -1.74
SOP4	YJL192C	PRP16	P15938	1071 aa	Predicted RBP	4.17	□□□□□ -1.74
SOP4	YJL192C	HSP60	P19882	572 aa	Known RBP	4.17	□□□□□ -1.74
SOP4	YJL192C	RPL5	P26321	297 aa	Known RBP	4.17	□□□□□ -1.74
SOP4	YJL192C	RAD16	P31244	790 aa		4.17	□□□□□ -1.74
SOP4	YJL192C	SRP40	P32583	406 aa	Predicted RBP	4.17	□□□□□ -1.74
SOP4	YJL192C	RAD24	P32641	659 aa		4.17	□□□□□ -1.74
SOP4	YJL192C	KTR4	P38131	464 aa		4.17	□□□□□ -1.74
SOP4	YJL192C	YHR020W	P38708	688 aa	Known RBP	4.17	□□□□□ -1.74
SOP4	YJL192C	YHR078W	P38799	552 aa		4.17	□□□□□ -1.74
SOP4	YJL192C	IAH1	P41734	238 aa		4.17	□□□□□ -1.74
SOP4	YJL192C	GYP8	P43570	497 aa		4.17	□□□□□ -1.74
SOP4	YJL192C	YJR008W	P47085	338 aa		4.17	□□□□□ -1.74
SOP4	YJL192C	YJR079W	P47126	109 aa		4.17	□□□□□ -1.74
SOP4	YJL192C	BOP3	P53958	396 aa		4.17	□□□□□ -1.74
SOP4	YJL192C	INP2	Q03824	705 aa		4.17	□□□□□ -1.74
SOP4	YJL192C	EIS1	Q05050	843 aa	Known RBP	4.17	□□□□□ -1.74
SOP4	YJL192C	YLR407W	Q06070	228 aa		4.17	□□□□□ -1.74
SOP4	YJL192C	ATG23	Q06671	453 aa		4.17	□□□□□ -1.74
SOP4	YJL192C	BRE1	Q07457	700 aa	Known RBP	4.17	□□□□□ -1.74
SOP4	YJL192C	NOP6	Q07623	225 aa	Known RBP	4.17	□□□□□ -1.74
SOP4	YJL192C	CDC53	Q12018	815 aa	Known RBP	4.17	□□□□□ -1.74
SOP4	YJL192C	YOR022C	Q12204	715 aa		4.17	□□□□□ -1.74
SOP4	YJL192C	SWM1	Q12379	170 aa		4.17	□□□□□ -1.74
SOP4	YJL192C	RMP1	Q12530	201 aa		4.17	□□□□□ -1.74
SOP4	YJL192C	CIT1	P00890	479 aa		4.16	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 106.3 ms