RNA–Protein interactions for RNA: YIR040C

YIR040C, Transcript of Dubious open reading frame, yeastyeast

Gene YIR040C, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YIR040CYIR040C YBR284WP38150 797 aa3.51□□□□□ -1.85
YIR040CYIR040C HSM3P38348 480 aa3.51□□□□□ -1.85
YIR040CYIR040C TOM71P38825 639 aaKnown RBP3.51□□□□□ -1.85
YIR040CYIR040C MPT5P39016 859 aaKnown RBP RIP-Chip data3.51□□□□□ -1.85not detected
YIR040CYIR040C PLB1P39105 664 aa3.51□□□□□ -1.85
YIR040CYIR040C SIT1P39980 628 aa3.51□□□□□ -1.85
YIR040CYIR040C YEN1P40028 759 aa3.51□□□□□ -1.85
YIR040CYIR040C TMN3P40071 706 aa3.51□□□□□ -1.85
YIR040CYIR040C RIO2P40160 425 aaKnown RBP3.51□□□□□ -1.85
YIR040CYIR040C TOK1P40310 691 aa3.51□□□□□ -1.85
YIR040CYIR040C YJL070CP40361 888 aa3.51□□□□□ -1.85
YIR040CYIR040C CHA4P43634 648 aa3.51□□□□□ -1.85
YIR040CYIR040C DCP2P53550 970 aaKnown RBP3.51□□□□□ -1.85
YIR040CYIR040C PAP2P53632 584 aaKnown RBP3.51□□□□□ -1.85
YIR040CYIR040C RNT1Q02555 471 aa3.51□□□□□ -1.85
YIR040CYIR040C SMD2Q06217 110 aaKnown RBP3.51□□□□□ -1.85
YIR040CYIR040C RKM1Q08961 583 aaPredicted RBP3.51□□□□□ -1.85
YIR040CYIR040C RRP36Q12481 300 aaPredicted RBP3.51□□□□□ -1.85
YIR040CYIR040C SEC39Q12745 709 aa3.51□□□□□ -1.85
YIR040CYIR040C TMA7Q3E764 64 aaKnown RBP3.51□□□□□ -1.85
YIR040CYIR040C LSO2Q3E772 92 aaKnown RBP3.51□□□□□ -1.85
YIR040CYIR040C YBL111CQ3E7Y5 667 aa3.51□□□□□ -1.85
YIR040CYIR040C YIL002W-AQ3E7Z5 69 aa3.51□□□□□ -1.85
YIR040CYIR040C RAD50P12753 1312 aa3.5□□□□□ -1.85
YIR040CYIR040C TEF1P02994 458 aaKnown RBP3.5□□□□□ -1.85
YIR040CYIR040C TOP3P13099 656 aa3.5□□□□□ -1.85
YIR040CYIR040C TPM1P17536 199 aaKnown RBP3.5□□□□□ -1.85
YIR040CYIR040C GLK1P17709 500 aaKnown RBP3.5□□□□□ -1.85
YIR040CYIR040C PMA2P19657 947 aa3.5□□□□□ -1.85
YIR040CYIR040C PRP9P19736 530 aaKnown RBP3.5□□□□□ -1.85
YIR040CYIR040C CDC48P25694 835 aaKnown RBP3.5□□□□□ -1.85
YIR040CYIR040C MSH2P25847 964 aa3.5□□□□□ -1.85
YIR040CYIR040C ITR1P30605 584 aa3.5□□□□□ -1.85
YIR040CYIR040C RAD16P31244 790 aa3.5□□□□□ -1.85
YIR040CYIR040C ACP1P32463 125 aa3.5□□□□□ -1.85
YIR040CYIR040C PTR2P32901 601 aa3.5□□□□□ -1.85
YIR040CYIR040C SSZ1P38788 538 aaKnown RBP3.5□□□□□ -1.85
YIR040CYIR040C YHR131CP38835 850 aa3.5□□□□□ -1.85
YIR040CYIR040C CCC2P38995 1004 aa3.5□□□□□ -1.85
YIR040CYIR040C MTW1P39731 289 aa3.5□□□□□ -1.85
YIR040CYIR040C YIL166CP40445 542 aa3.5□□□□□ -1.85
YIR040CYIR040C IML2P47031 731 aa3.5□□□□□ -1.85
YIR040CYIR040C MCM6P53091 1017 aaKnown RBP3.5□□□□□ -1.85
YIR040CYIR040C LSG1P53145 640 aaKnown RBP3.5□□□□□ -1.85
YIR040CYIR040C SPO1P53541 631 aa3.5□□□□□ -1.85
YIR040CYIR040C FOL1P53848 824 aa3.5□□□□□ -1.85
YIR040CYIR040C ARP5P53946 755 aa3.5□□□□□ -1.85
YIR040CYIR040C COG6P53959 839 aa3.5□□□□□ -1.85
YIR040CYIR040C EAF1Q06337 982 aa3.5□□□□□ -1.85
YIR040CYIR040C YPR196WQ06595 470 aa3.5□□□□□ -1.85
YIR040CYIR040C RSC3Q06639 885 aa3.5□□□□□ -1.85
YIR040CYIR040C NOP12Q08208 459 aaKnown RBP3.5□□□□□ -1.85
YIR040CYIR040C YPR071WQ12346 211 aa3.5□□□□□ -1.85
YIR040CYIR040C HBN1Q96VH4 193 aa3.5□□□□□ -1.85
YIR040CYIR040C GAL1P04385 528 aa3.49□□□□□ -1.85
YIR040CYIR040C MPH2P0CD99 609 aa3.49□□□□□ -1.85
YIR040CYIR040C ARE1P25628 610 aa3.49□□□□□ -1.85
YIR040CYIR040C URA1P28272 314 aaPredicted RBP3.49□□□□□ -1.85
YIR040CYIR040C PUP2P32379 260 aa3.49□□□□□ -1.85
YIR040CYIR040C MRS6P32864 603 aaKnown RBP3.49□□□□□ -1.85
YIR040CYIR040C MIA40P36046 403 aa3.49□□□□□ -1.85
YIR040CYIR040C RSM22P36056 628 aa3.49□□□□□ -1.85
YIR040CYIR040C YKR018CP36114 725 aa3.49□□□□□ -1.85
YIR040CYIR040C UBP13P38187 747 aa3.49□□□□□ -1.85
YIR040CYIR040C MED8P38304 223 aa3.49□□□□□ -1.85
YIR040CYIR040C ERC1P38767 581 aa3.49□□□□□ -1.85
YIR040CYIR040C SMC2P38989 1170 aaKnown RBP3.49□□□□□ -1.85
YIR040CYIR040C CCT3P39077 534 aaKnown RBP3.49□□□□□ -1.85
YIR040CYIR040C ALD5P40047 520 aaKnown RBP3.49□□□□□ -1.85
YIR040CYIR040C RIC1P40395 1056 aa3.49□□□□□ -1.85
YIR040CYIR040C YIR042CP40586 236 aa3.49□□□□□ -1.85
YIR040CYIR040C PHB1P40961 287 aa3.49□□□□□ -1.85
YIR040CYIR040C ALG2P43636 503 aa3.49□□□□□ -1.85
YIR040CYIR040C FYV8P46949 817 aaKnown RBP3.49□□□□□ -1.85
YIR040CYIR040C RAD17P48581 401 aa3.49□□□□□ -1.85
YIR040CYIR040C MNN10P50108 393 aaKnown RBP3.49□□□□□ -1.85
YIR040CYIR040C CGR1P53188 120 aa3.49□□□□□ -1.85
YIR040CYIR040C SND1Q04007 877 aa3.49□□□□□ -1.85
YIR040CYIR040C ARR2Q06597 130 aa3.49□□□□□ -1.85
YIR040CYIR040C SPO75Q07798 868 aa3.49□□□□□ -1.85
YIR040CYIR040C BRX1Q08235 291 aaKnown RBP3.49□□□□□ -1.85
YIR040CYIR040C DNL4Q08387 944 aaPredicted RBP3.49□□□□□ -1.85
YIR040CYIR040C YOR378WQ08902 515 aa3.49□□□□□ -1.85
YIR040CYIR040C KCS1Q12494 1050 aa3.49□□□□□ -1.85
YIR040CYIR040C SMC6Q12749 1114 aa3.49□□□□□ -1.85
YIR040CYIR040C YMR084WA2P2R3 262 aa3.48□□□□□ -1.85
YIR040CYIR040C CIT1P00890 479 aa3.48□□□□□ -1.85
YIR040CYIR040C NOT3P06102 836 aaKnown RBP3.48□□□□□ -1.85
YIR040CYIR040C MSD1P15179 658 aaKnown RBP3.48□□□□□ -1.85
YIR040CYIR040C VMA2P16140 517 aaKnown RBP3.48□□□□□ -1.85
YIR040CYIR040C TRX1P22217 103 aaKnown RBP3.48□□□□□ -1.85
YIR040CYIR040C STE11P23561 717 aa3.48□□□□□ -1.85
YIR040CYIR040C CDC10P25342 322 aaKnown RBP3.48□□□□□ -1.85
YIR040CYIR040C PAP1P29468 568 aaKnown RBP3.48□□□□□ -1.85
YIR040CYIR040C NIP1P32497 812 aaKnown RBP3.48□□□□□ -1.85
YIR040CYIR040C CNS1P33313 385 aa3.48□□□□□ -1.85
YIR040CYIR040C NUF2P33895 451 aa3.48□□□□□ -1.85
YIR040CYIR040C YEL1P34225 687 aa3.48□□□□□ -1.85
YIR040CYIR040C BMH2P34730 273 aaKnown RBP3.48□□□□□ -1.85
YIR040CYIR040C CPR5P35176 225 aa3.48□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms