RNA–Protein interactions for RNA: YIR039C

YPS6, Transcript of Putative GPI-anchored aspartic protease, yeast

Gene YPS6, Length 1,614 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPS6	YIR039C	YKR051W	P36142	418 aa		3.77	□□□□□ -1.81
YPS6	YIR039C	ETP1	P38748	585 aa	Known RBP	3.77	□□□□□ -1.81
YPS6	YIR039C	EMP65	P40085	556 aa		3.77	□□□□□ -1.81
YPS6	YIR039C	ADE16	P54113	591 aa	Known RBP	3.77	□□□□□ -1.81
YPS6	YIR039C	CTF4	Q01454	927 aa		3.77	□□□□□ -1.81
YPS6	YIR039C	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	3.77	□□□□□ -1.81	not detected
YPS6	YIR039C	THI21	Q08975	551 aa		3.77	□□□□□ -1.81
YPS6	YIR039C	EDE1	P34216	1381 aa		3.77	□□□□□ -1.81
YPS6	YIR039C	RSF2	P46974	1380 aa		3.77	□□□□□ -1.81
YPS6	YIR039C	YRF1-3	P0CX14	1859 aa		3.77	□□□□□ -1.81
YPS6	YIR039C	YRF1-7	P0CX15	1859 aa		3.77	□□□□□ -1.81
YPS6	YIR039C	YRF1-6	P53819	1859 aa		3.77	□□□□□ -1.81
YPS6	YIR039C	IME2	P32581	645 aa		3.77	□□□□□ -1.81
YPS6	YIR039C	OAF3	P36023	863 aa		3.77	□□□□□ -1.81
YPS6	YIR039C	AIM3	P38266	947 aa	Known RBP	3.77	□□□□□ -1.81
YPS6	YIR039C	RIM4	P38741	713 aa		3.77	□□□□□ -1.81
YPS6	YIR039C	CEP3	P40969	608 aa		3.77	□□□□□ -1.81
YPS6	YIR039C	SHR5	P41912	237 aa		3.77	□□□□□ -1.81
YPS6	YIR039C	RAI1	P53063	387 aa	Known RBP	3.77	□□□□□ -1.81
YPS6	YIR039C	SLD3	P53135	668 aa		3.77	□□□□□ -1.81
YPS6	YIR039C	NPY1	P53164	384 aa		3.77	□□□□□ -1.81
YPS6	YIR039C	YKR011C	Q02209	353 aa		3.77	□□□□□ -1.81
YPS6	YIR039C	RSM24	Q03976	319 aa		3.77	□□□□□ -1.81
YPS6	YIR039C	YHM2	Q04013	314 aa		3.77	□□□□□ -1.81
YPS6	YIR039C	PEX15	Q08215	383 aa		3.77	□□□□□ -1.81
YPS6	YIR039C	YPR027C	Q12079	277 aa		3.77	□□□□□ -1.81
YPS6	YIR039C	RPS21B	Q3E754	87 aa	Known RBP	3.77	□□□□□ -1.81
YPS6	YIR039C	YLR149C	Q99296	730 aa		3.77	□□□□□ -1.81
YPS6	YIR039C	RPS9A	O13516	197 aa	Known RBP	3.76	□□□□□ -1.81
YPS6	YIR039C	RPS19A	P07280	144 aa	Known RBP	3.76	□□□□□ -1.81
YPS6	YIR039C	RPS19B	P07281	144 aa	Predicted RBP	3.76	□□□□□ -1.81
YPS6	YIR039C	MRP7	P12687	371 aa		3.76	□□□□□ -1.81
YPS6	YIR039C	OSM1	P21375	501 aa	Known RBP	3.76	□□□□□ -1.81
YPS6	YIR039C	MRS6	P32864	603 aa	Known RBP	3.76	□□□□□ -1.81
YPS6	YIR039C	TYE7	P33122	291 aa	Predicted RBP	3.76	□□□□□ -1.81
YPS6	YIR039C	YKR018C	P36114	725 aa		3.76	□□□□□ -1.81
YPS6	YIR039C	SAP190	P36123	1033 aa		3.76	□□□□□ -1.81
YPS6	YIR039C	ABZ1	P37254	787 aa	Predicted RBP	3.76	□□□□□ -1.81
YPS6	YIR039C	RFC1	P38630	861 aa	Known RBP	3.76	□□□□□ -1.81
YPS6	YIR039C	BNA2	P47125	453 aa		3.76	□□□□□ -1.81
YPS6	YIR039C	PTA1	Q01329	785 aa	Predicted RBP	3.76	□□□□□ -1.81
YPS6	YIR039C	CRR1	Q05790	422 aa		3.76	□□□□□ -1.81
YPS6	YIR039C	RPN7	Q06103	429 aa	Known RBP	3.76	□□□□□ -1.81
YPS6	YIR039C	NKP2	Q06162	153 aa		3.76	□□□□□ -1.81
YPS6	YIR039C	DCS2	Q12123	353 aa		3.76	□□□□□ -1.81
YPS6	YIR039C	YOR022C	Q12204	715 aa		3.76	□□□□□ -1.81
YPS6	YIR039C	RIB2	Q12362	591 aa	Known RBP	3.76	□□□□□ -1.81
YPS6	YIR039C	Q0142	Q9ZZW4	58 aa		3.76	□□□□□ -1.81
YPS6	YIR039C	PRC1	P00729	532 aa		3.75	□□□□□ -1.81
YPS6	YIR039C	KIN2	P13186	1147 aa	Known RBP	3.75	□□□□□ -1.81
YPS6	YIR039C	APL1	P27351	700 aa		3.75	□□□□□ -1.81
YPS6	YIR039C	PTH2	P34222	208 aa		3.75	□□□□□ -1.81
YPS6	YIR039C	YHL041W	P38730	149 aa		3.75	□□□□□ -1.81
YPS6	YIR039C	YFL052W	P43551	465 aa		3.75	□□□□□ -1.81
YPS6	YIR039C	ZIP2	P53061	704 aa		3.75	□□□□□ -1.81
YPS6	YIR039C	VPS30	Q02948	557 aa		3.75	□□□□□ -1.81
YPS6	YIR039C	VPS64	Q03944	604 aa		3.75	□□□□□ -1.81
YPS6	YIR039C	SIZ1	Q04195	904 aa		3.75	□□□□□ -1.81
YPS6	YIR039C	ECM38	Q05902	660 aa	Predicted RBP	3.75	□□□□□ -1.81
YPS6	YIR039C	HAL9	Q12180	1030 aa		3.75	□□□□□ -1.81
YPS6	YIR039C	APA1	P16550	321 aa	Known RBP	3.74	□□□□□ -1.81
YPS6	YIR039C	RPD3	P32561	433 aa		3.74	□□□□□ -1.81
YPS6	YIR039C	SRP101	P32916	621 aa		3.74	□□□□□ -1.81
YPS6	YIR039C	MNN4	P36044	1178 aa		3.74	□□□□□ -1.81
YPS6	YIR039C	NUP133	P36161	1157 aa		3.74	□□□□□ -1.81
YPS6	YIR039C	KTR4	P38131	464 aa		3.74	□□□□□ -1.81
YPS6	YIR039C	FAT1	P38225	669 aa		3.74	□□□□□ -1.81
YPS6	YIR039C	HIS6	P40545	261 aa		3.74	□□□□□ -1.81
YPS6	YIR039C	YIR014W	P40570	242 aa		3.74	□□□□□ -1.81
YPS6	YIR039C	TAN1	P53072	289 aa	Predicted RBP	3.74	□□□□□ -1.81
YPS6	YIR039C	PCL10	P53124	433 aa		3.74	□□□□□ -1.81
YPS6	YIR039C	SNO2	P53823	222 aa		3.74	□□□□□ -1.81
YPS6	YIR039C	MRPL22	P53881	309 aa		3.74	□□□□□ -1.81
YPS6	YIR039C	CDA1	Q06702	301 aa		3.74	□□□□□ -1.81
YPS6	YIR039C	MSS18	P08593	268 aa		3.73	□□□□□ -1.81
YPS6	YIR039C	SWI6	P09959	803 aa		3.73	□□□□□ -1.81
YPS6	YIR039C	HSF1	P10961	833 aa		3.73	□□□□□ -1.81
YPS6	YIR039C	SEC65	P29478	273 aa		3.73	□□□□□ -1.81
YPS6	YIR039C	YKU70	P32807	602 aa		3.73	□□□□□ -1.81
YPS6	YIR039C	APL2	P36000	726 aa	Predicted RBP	3.73	□□□□□ -1.81
YPS6	YIR039C	MAL31	P38156	614 aa		3.73	□□□□□ -1.81
YPS6	YIR039C	EXO84	P38261	753 aa		3.73	□□□□□ -1.81
YPS6	YIR039C	DJP1	P40564	432 aa		3.73	□□□□□ -1.81
YPS6	YIR039C	YJR039W	P47107	1121 aa		3.73	□□□□□ -1.81
YPS6	YIR039C	RNR4	P49723	345 aa	Known RBP	3.73	□□□□□ -1.81
YPS6	YIR039C	YBP2	P53169	641 aa		3.73	□□□□□ -1.81
YPS6	YIR039C	RIM8	P53179	542 aa		3.73	□□□□□ -1.81
YPS6	YIR039C	DUS1	P53759	423 aa	Known RBP	3.73	□□□□□ -1.81
YPS6	YIR039C	CNM67	P53865	581 aa	Known RBP	3.73	□□□□□ -1.81
YPS6	YIR039C	EAF7	P53911	425 aa	Known RBP	3.73	□□□□□ -1.81
YPS6	YIR039C	MSC2	Q03455	724 aa		3.73	□□□□□ -1.81
YPS6	YIR039C	PSR2	Q07949	397 aa		3.73	□□□□□ -1.81
YPS6	YIR039C	YPL277C	Q08989	487 aa		3.73	□□□□□ -1.81
YPS6	YIR039C	SWI1	P09547	1314 aa		3.73	□□□□□ -1.81
YPS6	YIR039C	RAD50	P12753	1312 aa		3.73	□□□□□ -1.81
YPS6	YIR039C	CYC1	P00044	109 aa	Predicted RBP	3.73	□□□□□ -1.81
YPS6	YIR039C	FBP1	P09201	348 aa		3.73	□□□□□ -1.81
YPS6	YIR039C	PCT1	P13259	424 aa		3.73	□□□□□ -1.81
YPS6	YIR039C	CMP2	P14747	604 aa		3.73	□□□□□ -1.81
YPS6	YIR039C	RPA135	P22138	1203 aa	Known RBP	3.73	□□□□□ -1.81

Retrieved 100 of 5,963 RNA–protein pairs in 78.3 ms