RNA–Protein interactions for RNA: YIL148W

RPL40A, Transcript of Ubiquitin-ribosomal 60S subunit protein L40A fusion protein, yeastyeast

Gene RPL40A, Length 387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40AYIL148W BNR1P40450 1375 aa2.86□□□□□ -1.95
RPL40AYIL148W RPS17AP02407 136 aaKnown RBP2.85□□□□□ -1.95
RPL40AYIL148W ATP4P05626 244 aa2.85□□□□□ -1.95
RPL40AYIL148W SWI6P09959 803 aa2.85□□□□□ -1.95
RPL40AYIL148W RPS21AP0C0V8 87 aaKnown RBP2.85□□□□□ -1.95
RPL40AYIL148W GLN4P13188 809 aaKnown RBP2.85□□□□□ -1.95
RPL40AYIL148W RPS17BP14127 136 aaKnown RBP2.85□□□□□ -1.95
RPL40AYIL148W FRS1P15624 595 aaKnown RBP2.85□□□□□ -1.95
RPL40AYIL148W RNR1P21524 888 aaKnown RBP2.85□□□□□ -1.95
RPL40AYIL148W IMG2P25642 146 aaPredicted RBP2.85□□□□□ -1.95
RPL40AYIL148W DAL3P32459 195 aa2.85□□□□□ -1.95
RPL40AYIL148W HIR1P32479 840 aa2.85□□□□□ -1.95
RPL40AYIL148W HIS7P33734 552 aaKnown RBP2.85□□□□□ -1.95
RPL40AYIL148W YHR033WP38690 423 aa2.85□□□□□ -1.95
RPL40AYIL148W YHR112CP38716 378 aa2.85□□□□□ -1.95
RPL40AYIL148W HXT6P39003 570 aaKnown RBP2.85□□□□□ -1.95
RPL40AYIL148W HXT7P39004 570 aa2.85□□□□□ -1.95
RPL40AYIL148W SAW1P39735 261 aa2.85□□□□□ -1.95
RPL40AYIL148W PXA1P41909 870 aa2.85□□□□□ -1.95
RPL40AYIL148W ERG5P54781 538 aa2.85□□□□□ -1.95
RPL40AYIL148W AFT2Q08957 416 aa2.85□□□□□ -1.95
RPL40AYIL148W NOP56Q12460 504 aaKnown RBP RIP-Chip data2.85□□□□□ -1.95not detected
RPL40AYIL148W MPD2Q99316 277 aa2.85□□□□□ -1.95
RPL40AYIL148W SST2P11972 698 aaKnown RBP2.84□□□□□ -1.95
RPL40AYIL148W LAT1P12695 482 aaKnown RBP2.84□□□□□ -1.95
RPL40AYIL148W PRP4P20053 465 aaKnown RBP2.84□□□□□ -1.95
RPL40AYIL148W MVD1P32377 396 aaKnown RBP2.84□□□□□ -1.95
RPL40AYIL148W SEC6P32844 805 aa2.84□□□□□ -1.95
RPL40AYIL148W SDS22P36047 338 aa2.84□□□□□ -1.95
RPL40AYIL148W TAF5P38129 798 aa2.84□□□□□ -1.95
RPL40AYIL148W SRP68P38687 599 aaKnown RBP2.84□□□□□ -1.95
RPL40AYIL148W BEM4P39011 633 aa2.84□□□□□ -1.95
RPL40AYIL148W VID28P40547 921 aa2.84□□□□□ -1.95
RPL40AYIL148W MUP1P50276 574 aa2.84□□□□□ -1.95
RPL40AYIL148W MDR1P53258 950 aa2.84□□□□□ -1.95
RPL40AYIL148W TEX1P53851 422 aaKnown RBP2.84□□□□□ -1.95
RPL40AYIL148W SQS1P53866 767 aaKnown RBP2.84□□□□□ -1.95
RPL40AYIL148W LEE1Q02799 301 aaKnown RBP2.84□□□□□ -1.95
RPL40AYIL148W MRH1Q12117 320 aaPredicted RBP2.84□□□□□ -1.95
RPL40AYIL148W CLF1Q12309 687 aaPredicted RBP2.84□□□□□ -1.95
RPL40AYIL148W GPR1Q12361 961 aa2.84□□□□□ -1.95
RPL40AYIL148W HEM12P32347 362 aaPredicted RBP2.83□□□□□ -1.96
RPL40AYIL148W NTH1P32356 751 aa2.83□□□□□ -1.96
RPL40AYIL148W PPS1P38148 807 aa2.83□□□□□ -1.96
RPL40AYIL148W FAT1P38225 669 aa2.83□□□□□ -1.96
RPL40AYIL148W CCT3P39077 534 aaKnown RBP2.83□□□□□ -1.96
RPL40AYIL148W PIG2P40187 538 aa2.83□□□□□ -1.96
RPL40AYIL148W RSC8P43609 557 aaKnown RBP2.83□□□□□ -1.96
RPL40AYIL148W TAF4P50105 388 aa2.83□□□□□ -1.96
RPL40AYIL148W PAP2P53632 584 aaKnown RBP2.83□□□□□ -1.96
RPL40AYIL148W NSE5Q03718 556 aa2.83□□□□□ -1.96
RPL40AYIL148W ECM38Q05902 660 aaPredicted RBP2.83□□□□□ -1.96
RPL40AYIL148W YAP7Q08182 245 aa2.83□□□□□ -1.96
RPL40AYIL148W NGL1Q08213 363 aaKnown RBP2.83□□□□□ -1.96
RPL40AYIL148W POM34Q12445 299 aa2.83□□□□□ -1.96
RPL40AYIL148W ECM3Q99252 613 aa2.83□□□□□ -1.96
RPL40AYIL148W SEC12P11655 471 aa2.82□□□□□ -1.96
RPL40AYIL148W ABF1P14164 731 aa2.82□□□□□ -1.96
RPL40AYIL148W PHO81P17442 1178 aa2.82□□□□□ -1.96
RPL40AYIL148W DPB3P27344 201 aa2.82□□□□□ -1.96
RPL40AYIL148W PTP2P29461 750 aa2.82□□□□□ -1.96
RPL40AYIL148W PPZ2P33329 710 aa2.82□□□□□ -1.96
RPL40AYIL148W ENP1P38333 483 aaKnown RBP2.82□□□□□ -1.96
RPL40AYIL148W NUP60P39705 539 aa2.82□□□□□ -1.96
RPL40AYIL148W YNL195CP40168 261 aa2.82□□□□□ -1.96
RPL40AYIL148W GID8P40208 455 aa2.82□□□□□ -1.96
RPL40AYIL148W VPS27P40343 622 aaKnown RBP2.82□□□□□ -1.96
RPL40AYIL148W MRPS35P53292 345 aa2.82□□□□□ -1.96
RPL40AYIL148W SPO1P53541 631 aa2.82□□□□□ -1.96
RPL40AYIL148W YNL034WP53963 612 aa2.82□□□□□ -1.96
RPL40AYIL148W YNL018CP53976 612 aa2.82□□□□□ -1.96
RPL40AYIL148W MET14Q02196 202 aa2.82□□□□□ -1.96
RPL40AYIL148W MLC2Q06580 163 aa2.82□□□□□ -1.96
RPL40AYIL148W HBT1Q07653 1046 aaKnown RBP2.82□□□□□ -1.96
RPL40AYIL148W FRE5Q08908 694 aa2.82□□□□□ -1.96
RPL40AYIL148W AIM41Q12032 185 aa2.82□□□□□ -1.96
RPL40AYIL148W CWC2Q12046 339 aaPredicted RBP2.82□□□□□ -1.96
RPL40AYIL148W ZRT2Q12436 422 aa2.82□□□□□ -1.96
RPL40AYIL148W ACO1P19414 778 aaKnown RBP RIP-Chip data2.81□□□□□ -1.96not detected
RPL40AYIL148W PEX1P24004 1043 aa2.81□□□□□ -1.96
RPL40AYIL148W PHO3P24031 467 aa2.81□□□□□ -1.96
RPL40AYIL148W KCC4P25389 1037 aa2.81□□□□□ -1.96
RPL40AYIL148W SER1P33330 395 aaKnown RBP2.81□□□□□ -1.96
RPL40AYIL148W PTH2P34222 208 aa2.81□□□□□ -1.96
RPL40AYIL148W FLO10P36170 1169 aa2.81□□□□□ -1.96
RPL40AYIL148W TDP1P38319 544 aa2.81□□□□□ -1.96
RPL40AYIL148W RIX1P38883 763 aaPredicted RBP2.81□□□□□ -1.96
RPL40AYIL148W STL1P39932 569 aa2.81□□□□□ -1.96
RPL40AYIL148W FAF1P40546 346 aaPredicted RBP2.81□□□□□ -1.96
RPL40AYIL148W BIT61P47041 543 aa2.81□□□□□ -1.96
RPL40AYIL148W NOP9P47077 666 aaKnown RBP2.81□□□□□ -1.96
RPL40AYIL148W PIP2P52960 996 aa2.81□□□□□ -1.96
RPL40AYIL148W MTL1P53214 551 aa2.81□□□□□ -1.96
RPL40AYIL148W IMO32P53219 342 aa2.81□□□□□ -1.96
RPL40AYIL148W YAP1802P53309 568 aa2.81□□□□□ -1.96
RPL40AYIL148W HOF1Q05080 669 aa2.81□□□□□ -1.96
RPL40AYIL148W YPS7Q06325 596 aa2.81□□□□□ -1.96
RPL40AYIL148W VPS36Q06696 566 aa2.81□□□□□ -1.96
RPL40AYIL148W NUR1Q12066 484 aa2.81□□□□□ -1.96
RPL40AYIL148W PSF3Q12146 194 aa2.81□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 20.2 ms