RNA–Protein interactions for RNA: YHR154W

RTT107, Transcript of Protein implicated in Mms22-dependent DNA repair during S phase, yeastyeast

Gene RTT107, Length 3,213 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT107YHR154W GLO4Q12320 285 aa2.31□□□□□ -2.04
RTT107YHR154W TY1A-LR4P0C2I8 440 aaKnown RBP2.31□□□□□ -2.04
RTT107YHR154W TY1A-DR6P0CX70 440 aa2.31□□□□□ -2.04
RTT107YHR154W TY1A-ER1P0CX71 440 aa2.31□□□□□ -2.04
RTT107YHR154W TY1A-LR2P0CX72 440 aa2.31□□□□□ -2.04
RTT107YHR154W TY1A-PLP0CX73 440 aa2.31□□□□□ -2.04
RTT107YHR154W TY1A-JR1P0CX74 440 aa2.31□□□□□ -2.04
RTT107YHR154W TY1A-LR3P0CX75 440 aa2.31□□□□□ -2.04
RTT107YHR154W TY1A-ML2P0CX76 440 aa2.31□□□□□ -2.04
RTT107YHR154W RPC31P17890 251 aa2.31□□□□□ -2.04
RTT107YHR154W YEL1P34225 687 aa2.31□□□□□ -2.04
RTT107YHR154W APM3P38153 483 aa2.31□□□□□ -2.04
RTT107YHR154W TIF4631P39935 952 aaKnown RBP2.31□□□□□ -2.04
RTT107YHR154W VHR1P40522 640 aa2.31□□□□□ -2.04
RTT107YHR154W MOT3P54785 490 aaKnown RBP2.31□□□□□ -2.04
RTT107YHR154W UBP16Q02863 499 aa2.31□□□□□ -2.04
RTT107YHR154W TRS130Q03660 1102 aa2.31□□□□□ -2.04
RTT107YHR154W EIS1Q05050 843 aaKnown RBP2.31□□□□□ -2.04
RTT107YHR154W YDR338CQ05497 695 aa2.31□□□□□ -2.04
RTT107YHR154W SGD1Q06132 899 aa2.31□□□□□ -2.04
RTT107YHR154W OMS1Q06668 471 aa2.31□□□□□ -2.04
RTT107YHR154W ALG6Q12001 544 aaKnown RBP2.31□□□□□ -2.04
RTT107YHR154W TY1A-GR1Q12085 440 aa2.31□□□□□ -2.04
RTT107YHR154W ISA2Q12425 185 aa2.31□□□□□ -2.04
RTT107YHR154W TY1A-PR3Q6Q5H1 440 aaKnown RBP2.31□□□□□ -2.04
RTT107YHR154W TY1A-OLQ92392 440 aaKnown RBP2.31□□□□□ -2.04
RTT107YHR154W RPS21AP0C0V8 87 aaKnown RBP2.3□□□□□ -2.04
RTT107YHR154W RED1P14291 827 aa2.3□□□□□ -2.04
RTT107YHR154W RGP1P16664 663 aa2.3□□□□□ -2.04
RTT107YHR154W PHO3P24031 467 aa2.3□□□□□ -2.04
RTT107YHR154W ECM32P32644 1121 aaKnown RBP2.3□□□□□ -2.04
RTT107YHR154W ORC2P32833 620 aa2.3□□□□□ -2.04
RTT107YHR154W SDS22P36047 338 aa2.3□□□□□ -2.04
RTT107YHR154W RGD1P38339 666 aa2.3□□□□□ -2.04
RTT107YHR154W RIM11P38615 370 aa2.3□□□□□ -2.04
RTT107YHR154W MSC7P38694 644 aa2.3□□□□□ -2.04
RTT107YHR154W NMD3P38861 518 aaKnown RBP2.3□□□□□ -2.04
RTT107YHR154W SSN3P39073 555 aa2.3□□□□□ -2.04
RTT107YHR154W CAJ1P39101 391 aa2.3□□□□□ -2.04
RTT107YHR154W MEP1P40260 492 aa2.3□□□□□ -2.04
RTT107YHR154W LYS14P40971 790 aa2.3□□□□□ -2.04
RTT107YHR154W CAF16P43569 289 aa2.3□□□□□ -2.04
RTT107YHR154W RET2P43621 546 aa2.3□□□□□ -2.04
RTT107YHR154W CCM1P48237 864 aaPredicted RBP2.3□□□□□ -2.04
RTT107YHR154W GPI8P49018 411 aa2.3□□□□□ -2.04
RTT107YHR154W ECM9Q02202 377 aa2.3□□□□□ -2.04
RTT107YHR154W DIF1O13577 133 aa2.3□□□□□ -2.04
RTT107YHR154W RPS31P05759 152 aaKnown RBP2.3□□□□□ -2.04
RTT107YHR154W MSS18P08593 268 aa2.3□□□□□ -2.04
RTT107YHR154W HPR1P17629 752 aaKnown RBP2.3□□□□□ -2.04
RTT107YHR154W PRO1P32264 428 aa2.3□□□□□ -2.04
RTT107YHR154W MTH1P35198 433 aa2.3□□□□□ -2.04
RTT107YHR154W BYE1P36106 594 aa2.3□□□□□ -2.04
RTT107YHR154W MRPL16P38064 232 aa2.3□□□□□ -2.04
RTT107YHR154W CEP3P40969 608 aa2.3□□□□□ -2.04
RTT107YHR154W BUD27P43573 796 aaKnown RBP RIP-Chip data2.3□□□□□ -2.04not detected
RTT107YHR154W AVT1P47082 602 aa2.3□□□□□ -2.04
RTT107YHR154W YJR124CP47159 448 aa2.3□□□□□ -2.04
RTT107YHR154W YGR283CP53336 341 aaPredicted RBP2.3□□□□□ -2.04
RTT107YHR154W CNM67P53865 581 aaKnown RBP2.3□□□□□ -2.04
RTT107YHR154W NSE5Q03718 556 aa2.3□□□□□ -2.04
RTT107YHR154W UBX2Q04228 584 aa2.3□□□□□ -2.04
RTT107YHR154W VTI1Q04338 217 aa2.3□□□□□ -2.04
RTT107YHR154W YMR111CQ04461 462 aaPredicted RBP2.3□□□□□ -2.04
RTT107YHR154W TDA9Q04545 1251 aa2.3□□□□□ -2.04
RTT107YHR154W RPS21BQ3E754 87 aaKnown RBP2.3□□□□□ -2.04
RTT107YHR154W TAO3P40468 2376 aa2.3□□□□□ -2.04
RTT107YHR154W YML133CQ03099 1374 aa2.3□□□□□ -2.04
RTT107YHR154W LEU1P07264 779 aaKnown RBP2.3□□□□□ -2.04
RTT107YHR154W KIP1P28742 1111 aa2.3□□□□□ -2.04
RTT107YHR154W CNS1P33313 385 aa2.3□□□□□ -2.04
RTT107YHR154W EMC3P36039 253 aa2.3□□□□□ -2.04
RTT107YHR154W RDH54P38086 958 aa2.3□□□□□ -2.04
RTT107YHR154W REI1P38344 393 aaPredicted RBP2.3□□□□□ -2.04
RTT107YHR154W BCD1P38772 366 aa2.3□□□□□ -2.04
RTT107YHR154W YAR028WP39548 234 aa2.3□□□□□ -2.04
RTT107YHR154W TIM10P87108 93 aa2.3□□□□□ -2.04
RTT107YHR154W MRPL13Q02204 264 aa2.3□□□□□ -2.04
RTT107YHR154W FCP1Q03254 732 aa2.3□□□□□ -2.04
RTT107YHR154W YKU80Q04437 629 aa2.3□□□□□ -2.04
RTT107YHR154W RSC58Q07979 502 aa2.3□□□□□ -2.04
RTT107YHR154W CWC2Q12046 339 aaPredicted RBP2.3□□□□□ -2.04
RTT107YHR154W VPS5Q92331 675 aa2.3□□□□□ -2.04
RTT107YHR154W MLP1Q02455 1875 aaKnown RBP2.3□□□□□ -2.04
RTT107YHR154W PRC1P00729 532 aa2.29□□□□□ -2.04
RTT107YHR154W HTS1P07263 546 aaKnown RBP2.29□□□□□ -2.04
RTT107YHR154W MRPL36P36531 177 aa2.29□□□□□ -2.04
RTT107YHR154W MPH1P40562 993 aa2.29□□□□□ -2.04
RTT107YHR154W PUS2P53167 370 aa2.29□□□□□ -2.04
RTT107YHR154W COG8Q04632 607 aa2.29□□□□□ -2.04
RTT107YHR154W YDR341CQ05506 607 aaKnown RBP2.29□□□□□ -2.04
RTT107YHR154W PSR1Q07800 427 aa2.29□□□□□ -2.04
RTT107YHR154W YPL277CQ08989 487 aa2.29□□□□□ -2.04
RTT107YHR154W YRM1Q12340 786 aa2.29□□□□□ -2.04
RTT107YHR154W KCS1Q12494 1050 aa2.29□□□□□ -2.04
RTT107YHR154W GUK1P15454 187 aaKnown RBP2.29□□□□□ -2.04
RTT107YHR154W TRX1P22217 103 aaKnown RBP2.29□□□□□ -2.04
RTT107YHR154W CLB4P24871 460 aa2.29□□□□□ -2.04
RTT107YHR154W CMK1P27466 446 aaKnown RBP2.29□□□□□ -2.04
RTT107YHR154W PEP3P27801 918 aa2.29□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms