RNA–Protein interactions for RNA: YHR053C

CUP1-1, Transcript of Metallothionein, yeastyeast

Gene CUP1-1, Length 186 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUP1-1YHR053C TAD3Q9URQ3 322 aa5.05□□□□□ -1.6
CUP1-1YHR053C SWI6P09959 803 aa5.04□□□□□ -1.6
CUP1-1YHR053C THR1P17423 357 aaKnown RBP5.04□□□□□ -1.6
CUP1-1YHR053C SEC65P29478 273 aa5.04□□□□□ -1.6
CUP1-1YHR053C OAF1P39720 1047 aaPredicted RBP5.04□□□□□ -1.6
CUP1-1YHR053C BIT61P47041 543 aa5.04□□□□□ -1.6
CUP1-1YHR053C ECM9Q02202 377 aa5.04□□□□□ -1.6
CUP1-1YHR053C RGC1Q06108 1083 aaKnown RBP5.04□□□□□ -1.6
CUP1-1YHR053C CHS5Q12114 671 aaKnown RBP5.04□□□□□ -1.6
CUP1-1YHR053C FEN2P25621 512 aaKnown RBP5.03□□□□□ -1.6
CUP1-1YHR053C NTH1P32356 751 aa5.03□□□□□ -1.6
CUP1-1YHR053C DUN1P39009 513 aa5.03□□□□□ -1.6
CUP1-1YHR053C YIL077CP40508 320 aa5.03□□□□□ -1.6
CUP1-1YHR053C GPP1P41277 250 aaKnown RBP5.03□□□□□ -1.6
CUP1-1YHR053C PXA1P41909 870 aa5.03□□□□□ -1.6
CUP1-1YHR053C GPG1P53130 126 aa5.03□□□□□ -1.6
CUP1-1YHR053C PPN1Q04119 674 aa5.03□□□□□ -1.6
CUP1-1YHR053C RPS21BQ3E754 87 aaKnown RBP5.03□□□□□ -1.6
CUP1-1YHR053C RPS17AP02407 136 aaKnown RBP5.02□□□□□ -1.61
CUP1-1YHR053C RPS17BP14127 136 aaKnown RBP5.02□□□□□ -1.61
CUP1-1YHR053C TDP1P38319 544 aa5.02□□□□□ -1.61
CUP1-1YHR053C BDH2P39713 417 aa5.02□□□□□ -1.61
CUP1-1YHR053C VPS73P53142 486 aaKnown RBP5.02□□□□□ -1.61
CUP1-1YHR053C NOP15P53927 220 aaPredicted RBP5.02□□□□□ -1.61
CUP1-1YHR053C SEC6P32844 805 aa5.01□□□□□ -1.61
CUP1-1YHR053C OAF3P36023 863 aa5.01□□□□□ -1.61
CUP1-1YHR053C COS111P38308 924 aa5.01□□□□□ -1.61
CUP1-1YHR053C HXT6P39003 570 aaKnown RBP5.01□□□□□ -1.61
CUP1-1YHR053C HXT7P39004 570 aa5.01□□□□□ -1.61
CUP1-1YHR053C RFX1P48743 811 aa5.01□□□□□ -1.61
CUP1-1YHR053C YGR151CP53287 111 aa5.01□□□□□ -1.61
CUP1-1YHR053C YPS7Q06325 596 aa5.01□□□□□ -1.61
CUP1-1YHR053C HFI1Q12060 488 aa5.01□□□□□ -1.61
CUP1-1YHR053C MSL5Q12186 476 aaKnown RBP RIP-Chip data5.01□□□□□ -1.61not detected
CUP1-1YHR053C TAF3Q12297 353 aa5.01□□□□□ -1.61
CUP1-1YHR053C YPT7P32939 208 aa5□□□□□ -1.61
CUP1-1YHR053C UBP12P39538 1254 aa5□□□□□ -1.61
CUP1-1YHR053C MPS3P47069 682 aa5□□□□□ -1.61
CUP1-1YHR053C SPO1P53541 631 aa5□□□□□ -1.61
CUP1-1YHR053C RCR2Q03446 210 aaKnown RBP5□□□□□ -1.61
CUP1-1YHR053C YFT2Q06676 274 aa5□□□□□ -1.61
CUP1-1YHR053C YDL086WQ07505 273 aa5□□□□□ -1.61
CUP1-1YHR053C APM4Q99186 491 aa5□□□□□ -1.61
CUP1-1YHR053C FUB1P25659 250 aa4.99□□□□□ -1.61
CUP1-1YHR053C GMH1P36125 273 aa4.99□□□□□ -1.61
CUP1-1YHR053C CTP1P38152 299 aa4.99□□□□□ -1.61
CUP1-1YHR053C YEN1P40028 759 aa4.99□□□□□ -1.61
CUP1-1YHR053C YIL166CP40445 542 aa4.99□□□□□ -1.61
CUP1-1YHR053C CCT7P42943 550 aaKnown RBP4.99□□□□□ -1.61
CUP1-1YHR053C YSH1Q06224 779 aaPredicted RBP4.99□□□□□ -1.61
CUP1-1YHR053C GLN4P13188 809 aaKnown RBP4.98□□□□□ -1.61
CUP1-1YHR053C IME1P21190 360 aa4.98□□□□□ -1.61
CUP1-1YHR053C KCC4P25389 1037 aa4.98□□□□□ -1.61
CUP1-1YHR053C SET3P36124 751 aa4.98□□□□□ -1.61
CUP1-1YHR053C APL3P38065 1025 aa4.98□□□□□ -1.61
CUP1-1YHR053C BUD8P41698 603 aa4.98□□□□□ -1.61
CUP1-1YHR053C TAH11P47112 604 aa4.98□□□□□ -1.61
CUP1-1YHR053C ENP2P48234 707 aaKnown RBP4.98□□□□□ -1.61
CUP1-1YHR053C TAF4P50105 388 aa4.98□□□□□ -1.61
CUP1-1YHR053C STP4Q07351 490 aa4.98□□□□□ -1.61
CUP1-1YHR053C RPS21AP0C0V8 87 aaKnown RBP4.97□□□□□ -1.61
CUP1-1YHR053C KSP1P38691 1029 aaKnown RBP4.97□□□□□ -1.61
CUP1-1YHR053C KHA1P40309 873 aa4.97□□□□□ -1.61
CUP1-1YHR053C RNR4P49723 345 aaKnown RBP4.97□□□□□ -1.61
CUP1-1YHR053C SPC98P53540 846 aa4.97□□□□□ -1.61
CUP1-1YHR053C NSE5Q03718 556 aa4.97□□□□□ -1.61
CUP1-1YHR053C RMP1Q12530 201 aa4.97□□□□□ -1.61
CUP1-1YHR053C RPN13O13563 156 aa4.96□□□□□ -1.62
CUP1-1YHR053C SPO11P23179 398 aa4.96□□□□□ -1.62
CUP1-1YHR053C FAT1P38225 669 aa4.96□□□□□ -1.62
CUP1-1YHR053C YHR097CP38809 366 aaKnown RBP4.96□□□□□ -1.62
CUP1-1YHR053C VID28P40547 921 aa4.96□□□□□ -1.62
CUP1-1YHR053C IES1P43579 692 aa4.96□□□□□ -1.62
CUP1-1YHR053C DUG1P43616 481 aaKnown RBP4.96□□□□□ -1.62
CUP1-1YHR053C APM1Q00776 475 aaPredicted RBP4.96□□□□□ -1.62
CUP1-1YHR053C TRE2Q08693 809 aa4.96□□□□□ -1.62
CUP1-1YHR053C BMS1Q08965 1183 aaKnown RBP4.96□□□□□ -1.62
CUP1-1YHR053C TSR4P25040 408 aa4.95□□□□□ -1.62
CUP1-1YHR053C DGR2P32330 852 aa4.95□□□□□ -1.62
CUP1-1YHR053C GRX4P32642 244 aa4.95□□□□□ -1.62
CUP1-1YHR053C PPZ2P33329 710 aa4.95□□□□□ -1.62
CUP1-1YHR053C UBS1P38290 277 aa4.95□□□□□ -1.62
CUP1-1YHR053C NMA2P53204 395 aa4.95□□□□□ -1.62
CUP1-1YHR053C YHR033WP38690 423 aa4.94□□□□□ -1.62
CUP1-1YHR053C DIP5P53388 608 aa4.94□□□□□ -1.62
CUP1-1YHR053C YPR027CQ12079 277 aa4.94□□□□□ -1.62
CUP1-1YHR053C SUT2Q12286 268 aa4.94□□□□□ -1.62
CUP1-1YHR053C ACO1P19414 778 aaKnown RBP RIP-Chip data4.93□□□□□ -1.62not detected
CUP1-1YHR053C AEP2P22136 580 aa4.93□□□□□ -1.62
CUP1-1YHR053C ILV6P25605 309 aaKnown RBP4.93□□□□□ -1.62
CUP1-1YHR053C PRE4P30657 266 aa4.93□□□□□ -1.62
CUP1-1YHR053C MSS1P32559 526 aaPredicted RBP4.93□□□□□ -1.62
CUP1-1YHR053C FDC1Q03034 503 aa4.93□□□□□ -1.62
CUP1-1YHR053C SKY1Q03656 742 aa4.93□□□□□ -1.62
CUP1-1YHR053C UFO1Q04511 668 aa4.93□□□□□ -1.62
CUP1-1YHR053C IZH3Q07959 543 aa4.93□□□□□ -1.62
CUP1-1YHR053C RKI1Q12189 258 aa4.93□□□□□ -1.62
CUP1-1YHR053C LAM4P38800 1345 aa4.93□□□□□ -1.62
CUP1-1YHR053C EUG1P32474 517 aa4.92□□□□□ -1.62
CUP1-1YHR053C ELF1P36053 145 aa4.92□□□□□ -1.62
Retrieved 100 of 5,963 RNA–protein pairs in 678.6 ms