RNA–Protein interactions for RNA: YER150W

SPI1, Transcript of GPI-anchored cell wall protein involved in weak acid resistance, yeast

Gene SPI1, Length 447 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPI1	YER150W	SUP35	P05453	685 aa	Known RBP	4.25	□□□□□ -1.73
SPI1	YER150W	FUM1	P08417	488 aa	Known RBP	4.25	□□□□□ -1.73
SPI1	YER150W	NUC1	P08466	329 aa		4.25	□□□□□ -1.73
SPI1	YER150W	SEC23	P15303	768 aa	Known RBP	4.25	□□□□□ -1.73
SPI1	YER150W	OLE1	P21147	510 aa	Known RBP	4.25	□□□□□ -1.73
SPI1	YER150W	VPS3	P23643	1011 aa		4.25	□□□□□ -1.73
SPI1	YER150W	MIH1	P23748	554 aa		4.25	□□□□□ -1.73
SPI1	YER150W	SGF29	P25554	259 aa		4.25	□□□□□ -1.73
SPI1	YER150W	SFA1	P32771	386 aa		4.25	□□□□□ -1.73
SPI1	YER150W	SCD5	P34758	872 aa		4.25	□□□□□ -1.73
SPI1	YER150W	PET10	P36139	283 aa		4.25	□□□□□ -1.73
SPI1	YER150W	POL12	P38121	705 aa	Predicted RBP	4.25	□□□□□ -1.73
SPI1	YER150W	LDH1	P38139	375 aa		4.25	□□□□□ -1.73
SPI1	YER150W	YBR284W	P38150	797 aa		4.25	□□□□□ -1.73
SPI1	YER150W	SIF2	P38262	535 aa		4.25	□□□□□ -1.73
SPI1	YER150W	PEX32	P38292	413 aa		4.25	□□□□□ -1.73
SPI1	YER150W	YBR238C	P38330	731 aa	Known RBP	4.25	□□□□□ -1.73
SPI1	YER150W	PAN5	P38787	379 aa		4.25	□□□□□ -1.73
SPI1	YER150W	LAM1	P38851	1228 aa		4.25	□□□□□ -1.73
SPI1	YER150W	HXT13	P39924	564 aa		4.25	□□□□□ -1.73
SPI1	YER150W	YER010C	P40011	234 aa		4.25	□□□□□ -1.73
SPI1	YER150W	OSW5	P40219	148 aa		4.25	□□□□□ -1.73
SPI1	YER150W	LTP1	P40347	161 aa		4.25	□□□□□ -1.73
SPI1	YER150W	ATF1	P40353	525 aa		4.25	□□□□□ -1.73
SPI1	YER150W	INA22	P40576	216 aa		4.25	□□□□□ -1.73
SPI1	YER150W	RGD2	P43556	714 aa		4.25	□□□□□ -1.73
SPI1	YER150W	GYP8	P43570	497 aa		4.25	□□□□□ -1.73
SPI1	YER150W	NOP9	P47077	666 aa	Known RBP	4.25	□□□□□ -1.73
SPI1	YER150W	RSM26	P47141	266 aa		4.25	□□□□□ -1.73
SPI1	YER150W	BPL1	P48445	690 aa	Predicted RBP	4.25	□□□□□ -1.73
SPI1	YER150W	SAP4	P53036	818 aa		4.25	□□□□□ -1.73
SPI1	YER150W	ART5	P53244	586 aa	Known RBP	4.25	□□□□□ -1.73
SPI1	YER150W	HXT17	P53631	564 aa		4.25	□□□□□ -1.73
SPI1	YER150W	ARC35	P53731	342 aa	Known RBP	4.25	□□□□□ -1.73
SPI1	YER150W	YNR061C	P53747	219 aa		4.25	□□□□□ -1.73
SPI1	YER150W	YNR068C	P53754	272 aa		4.25	□□□□□ -1.73
SPI1	YER150W	DAK1	P54838	584 aa	Known RBP	4.25	□□□□□ -1.73
SPI1	YER150W	HXT15	P54854	567 aa		4.25	□□□□□ -1.73
SPI1	YER150W	ECM9	Q02202	377 aa		4.25	□□□□□ -1.73
SPI1	YER150W	INP2	Q03824	705 aa		4.25	□□□□□ -1.73
SPI1	YER150W	YOR352W	Q08816	343 aa		4.25	□□□□□ -1.73
SPI1	YER150W	RTN2	Q12443	393 aa		4.25	□□□□□ -1.73
SPI1	YER150W	TIF6	Q12522	245 aa	Known RBP	4.25	□□□□□ -1.73
SPI1	YER150W	YOR019W	Q99248	730 aa		4.25	□□□□□ -1.73
SPI1	YER150W	SSK22	P25390	1331 aa	Predicted RBP	4.24	□□□□□ -1.73
SPI1	YER150W	YLR358C	O13565	187 aa		4.24	□□□□□ -1.73
SPI1	YER150W	ADE8	P04161	214 aa		4.24	□□□□□ -1.73
SPI1	YER150W	HMG1	P12683	1054 aa		4.24	□□□□□ -1.73
SPI1	YER150W	MSD1	P15179	658 aa	Known RBP	4.24	□□□□□ -1.73
SPI1	YER150W	GUK1	P15454	187 aa	Known RBP	4.24	□□□□□ -1.73
SPI1	YER150W	CLN1	P20437	546 aa		4.24	□□□□□ -1.73
SPI1	YER150W	DBP3	P20447	523 aa	Known RBP	4.24	□□□□□ -1.73
SPI1	YER150W	YCK2	P23292	546 aa	Known RBP	4.24	□□□□□ -1.73
SPI1	YER150W	YCL049C	P25577	312 aa		4.24	□□□□□ -1.73
SPI1	YER150W	ADK2	P26364	225 aa		4.24	□□□□□ -1.73
SPI1	YER150W	YJU2	P28320	278 aa	Predicted RBP	4.24	□□□□□ -1.73
SPI1	YER150W	HSP104	P31539	908 aa	Known RBP	4.24	□□□□□ -1.73
SPI1	YER150W	ASF2	P32448	525 aa	Predicted RBP	4.24	□□□□□ -1.73
SPI1	YER150W	SUR1	P33300	382 aa		4.24	□□□□□ -1.73
SPI1	YER150W	YKL107W	P34251	309 aa		4.24	□□□□□ -1.73
SPI1	YER150W	PCH2	P38126	564 aa		4.24	□□□□□ -1.73
SPI1	YER150W	SLX1	P38324	304 aa		4.24	□□□□□ -1.73
SPI1	YER150W	PEX28	P38848	579 aa		4.24	□□□□□ -1.73
SPI1	YER150W	PKP1	P40530	394 aa		4.24	□□□□□ -1.73
SPI1	YER150W	NAS2	P40555	220 aa		4.24	□□□□□ -1.73
SPI1	YER150W	LIA1	P47120	325 aa	Known RBP	4.24	□□□□□ -1.73
SPI1	YER150W	GCV2	P49095	1034 aa		4.24	□□□□□ -1.73
SPI1	YER150W	TEL2	P53038	688 aa		4.24	□□□□□ -1.73
SPI1	YER150W	SNF12	P53628	566 aa		4.24	□□□□□ -1.73
SPI1	YER150W	TOF1	P53840	1238 aa		4.24	□□□□□ -1.73
SPI1	YER150W	YNL050C	P53952	270 aa		4.24	□□□□□ -1.73
SPI1	YER150W	TOF2	Q02208	771 aa		4.24	□□□□□ -1.73
SPI1	YER150W	GYL1	Q04322	720 aa		4.24	□□□□□ -1.73
SPI1	YER150W	RSF1	Q05043	376 aa		4.24	□□□□□ -1.73
SPI1	YER150W	ATG33	Q06485	197 aa		4.24	□□□□□ -1.73
SPI1	YER150W	GLE1	Q12315	538 aa		4.24	□□□□□ -1.73
SPI1	YER150W	PCD1	Q12524	340 aa		4.24	□□□□□ -1.73
SPI1	YER150W	SWI6	P09959	803 aa		4.23	□□□□□ -1.73
SPI1	YER150W	HCA4	P20448	770 aa	Known RBP	4.23	□□□□□ -1.73
SPI1	YER150W	UBC1	P21734	215 aa	Known RBP	4.23	□□□□□ -1.73
SPI1	YER150W	DBP2	P24783	546 aa	Known RBP	4.23	□□□□□ -1.73
SPI1	YER150W	NPP1	P25353	742 aa		4.23	□□□□□ -1.73
SPI1	YER150W	DMC1	P25453	334 aa		4.23	□□□□□ -1.73
SPI1	YER150W	RME1	P32338	300 aa	Known RBP	4.23	□□□□□ -1.73
SPI1	YER150W	HMX1	P32339	317 aa		4.23	□□□□□ -1.73
SPI1	YER150W	DOA4	P32571	926 aa		4.23	□□□□□ -1.73
SPI1	YER150W	YEL043W	P32618	956 aa		4.23	□□□□□ -1.73
SPI1	YER150W	SAP190	P36123	1033 aa		4.23	□□□□□ -1.73
SPI1	YER150W	ECM4	P36156	370 aa		4.23	□□□□□ -1.73
SPI1	YER150W	APE3	P37302	537 aa	Known RBP	4.23	□□□□□ -1.73
SPI1	YER150W	APM3	P38153	483 aa		4.23	□□□□□ -1.73
SPI1	YER150W	YBR287W	P38355	427 aa		4.23	□□□□□ -1.73
SPI1	YER150W	UME6	P39001	836 aa		4.23	□□□□□ -1.73
SPI1	YER150W	DUN1	P39009	513 aa		4.23	□□□□□ -1.73
SPI1	YER150W	SAW1	P39735	261 aa		4.23	□□□□□ -1.73
SPI1	YER150W	SDS3	P40505	327 aa		4.23	□□□□□ -1.73
SPI1	YER150W	GCN20	P43535	752 aa	Known RBP	4.23	□□□□□ -1.73
SPI1	YER150W	MET12	P46151	657 aa		4.23	□□□□□ -1.73
SPI1	YER150W	STU2	P46675	888 aa		4.23	□□□□□ -1.73
SPI1	YER150W	YGL176C	P46945	554 aa		4.23	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 10.5 ms