RNA–Protein interactions for RNA: YDR379C-A

SDH6, Transcript of Mitochondrial protein involved in assembly of succinate dehydrogenase, yeastyeast

Gene SDH6, Length 240 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDH6YDR379C-A RIM4P38741 713 aa1.76□□□□□ -2.13
SDH6YDR379C-A RLP7P40693 322 aaKnown RBP1.76□□□□□ -2.13
SDH6YDR379C-A BST1P43571 1029 aa1.76□□□□□ -2.13
SDH6YDR379C-A YJL043WP47053 257 aa1.76□□□□□ -2.13
SDH6YDR379C-A NOP9P47077 666 aaKnown RBP1.76□□□□□ -2.13
SDH6YDR379C-A REC102Q02721 264 aa1.76□□□□□ -2.13
SDH6YDR379C-A THI22Q06490 572 aa1.76□□□□□ -2.13
SDH6YDR379C-A REH1Q06709 432 aa1.76□□□□□ -2.13
SDH6YDR379C-A ECM3Q99252 613 aa1.76□□□□□ -2.13
SDH6YDR379C-A YCP4P25349 247 aaKnown RBP1.75□□□□□ -2.13
SDH6YDR379C-A VBA3P25594 458 aa1.75□□□□□ -2.13
SDH6YDR379C-A FMP46P36141 133 aaKnown RBP1.75□□□□□ -2.13
SDH6YDR379C-A OPT1P40897 799 aa1.75□□□□□ -2.13
SDH6YDR379C-A SNF12P53628 566 aa1.75□□□□□ -2.13
SDH6YDR379C-A CWC24P53769 259 aa1.75□□□□□ -2.13
SDH6YDR379C-A HMO1Q03973 246 aaKnown RBP1.75□□□□□ -2.13
SDH6YDR379C-A ERG20P08524 352 aaKnown RBP1.74□□□□□ -2.13
SDH6YDR379C-A YEL076C-AP0CX16 216 aa1.74□□□□□ -2.13
SDH6YDR379C-A YLR464WP0CX17 216 aa1.74□□□□□ -2.13
SDH6YDR379C-A YEL076CP39971 216 aa1.74□□□□□ -2.13
SDH6YDR379C-A GYP8P43570 497 aa1.74□□□□□ -2.13
SDH6YDR379C-A COX18P53239 316 aa1.74□□□□□ -2.13
SDH6YDR379C-A RPL7AP05737 244 aaKnown RBP1.73□□□□□ -2.13
SDH6YDR379C-A HSL7P38274 827 aa1.73□□□□□ -2.13
SDH6YDR379C-A MTG2P38860 518 aa1.73□□□□□ -2.13
SDH6YDR379C-A YIL169CP40442 995 aa1.73□□□□□ -2.13
SDH6YDR379C-A ALR2P43553 858 aa1.73□□□□□ -2.13
SDH6YDR379C-A RFX1P48743 811 aa1.73□□□□□ -2.13
SDH6YDR379C-A YGR283CP53336 341 aaPredicted RBP1.73□□□□□ -2.13
SDH6YDR379C-A TRS23Q03784 219 aa1.73□□□□□ -2.13
SDH6YDR379C-A YDR514CQ04408 483 aa1.73□□□□□ -2.13
SDH6YDR379C-A BSP1Q06604 576 aa1.73□□□□□ -2.13
SDH6YDR379C-A RPL7BQ12213 244 aaKnown RBP1.73□□□□□ -2.13
SDH6YDR379C-A YMR230W-AQ3E7B5 62 aa1.73□□□□□ -2.13
SDH6YDR379C-A AIM44Q99299 758 aa1.73□□□□□ -2.13
SDH6YDR379C-A YCR043CP25361 127 aa1.72□□□□□ -2.13
SDH6YDR379C-A FEN2P25621 512 aaKnown RBP1.72□□□□□ -2.13
SDH6YDR379C-A NTH1P32356 751 aa1.72□□□□□ -2.13
SDH6YDR379C-A RSC8P43609 557 aaKnown RBP1.72□□□□□ -2.13
SDH6YDR379C-A YMR317WQ04893 1140 aa1.72□□□□□ -2.13
SDH6YDR379C-A PUF2Q12221 1075 aaKnown RBP RIP-Chip data1.72□□□□□ -2.13not detected
SDH6YDR379C-A SEC6P32844 805 aa1.71□□□□□ -2.14
SDH6YDR379C-A ELF1P36053 145 aa1.71□□□□□ -2.14
SDH6YDR379C-A GID8P40208 455 aa1.71□□□□□ -2.14
SDH6YDR379C-A CFD1P40558 293 aa1.71□□□□□ -2.14
SDH6YDR379C-A YIR016WP40572 265 aa1.71□□□□□ -2.14
SDH6YDR379C-A MDV1P47025 714 aa1.71□□□□□ -2.14
SDH6YDR379C-A BOP3P53958 396 aa1.71□□□□□ -2.14
SDH6YDR379C-A YLR111WQ12528 110 aa1.71□□□□□ -2.14
SDH6YDR379C-A HBN1Q96VH4 193 aa1.71□□□□□ -2.14
SDH6YDR379C-A DHH1P39517 506 aaKnown RBP1.7□□□□□ -2.14
SDH6YDR379C-A PFD1P46988 109 aa1.7□□□□□ -2.14
SDH6YDR379C-A RPL15BP54780 204 aaPredicted RBP1.7□□□□□ -2.14
SDH6YDR379C-A DAK1P54838 584 aaKnown RBP1.7□□□□□ -2.14
SDH6YDR379C-A FCP1Q03254 732 aa1.7□□□□□ -2.14
SDH6YDR379C-A ZPS1Q12512 249 aa1.7□□□□□ -2.14
SDH6YDR379C-A MSS1P32559 526 aaPredicted RBP1.69□□□□□ -2.14
SDH6YDR379C-A STE5P32917 917 aa1.69□□□□□ -2.14
SDH6YDR379C-A MIP6P38760 659 aaKnown RBP1.69□□□□□ -2.14
SDH6YDR379C-A YNL195CP40168 261 aa1.69□□□□□ -2.14
SDH6YDR379C-A AZF1P41696 914 aa1.69□□□□□ -2.14
SDH6YDR379C-A YDR338CQ05497 695 aa1.69□□□□□ -2.14
SDH6YDR379C-A YPT1P01123 206 aaKnown RBP1.68□□□□□ -2.14
SDH6YDR379C-A MRPL7P36519 292 aa1.68□□□□□ -2.14
SDH6YDR379C-A YIL077CP40508 320 aa1.68□□□□□ -2.14
SDH6YDR379C-A TES1P41903 349 aaKnown RBP1.68□□□□□ -2.14
SDH6YDR379C-A COP1P53622 1201 aaKnown RBP1.68□□□□□ -2.14
SDH6YDR379C-A APJ1P53940 528 aa1.68□□□□□ -2.14
SDH6YDR379C-A MET7Q08645 548 aa1.68□□□□□ -2.14
SDH6YDR379C-A RDL1Q12305 139 aaKnown RBP1.68□□□□□ -2.14
SDH6YDR379C-A SEC3P33332 1336 aaKnown RBP1.67□□□□□ -2.14
SDH6YDR379C-A YMR084WA2P2R3 262 aa1.67□□□□□ -2.14
SDH6YDR379C-A CPA2P03965 1118 aaKnown RBP1.67□□□□□ -2.14
SDH6YDR379C-A RPS9BP05755 195 aaKnown RBP1.67□□□□□ -2.14
SDH6YDR379C-A SAN1P22470 610 aa1.67□□□□□ -2.14
SDH6YDR379C-A AIM17P23180 465 aaKnown RBP1.67□□□□□ -2.14
SDH6YDR379C-A YBR184WP38299 523 aa1.67□□□□□ -2.14
SDH6YDR379C-A PIH1P38768 344 aa1.67□□□□□ -2.14
SDH6YDR379C-A EXO1P39875 702 aa1.67□□□□□ -2.14
SDH6YDR379C-A ALY2P47029 1046 aa1.67□□□□□ -2.14
SDH6YDR379C-A UBX5Q06682 500 aa1.67□□□□□ -2.14
SDH6YDR379C-A PRP16P15938 1071 aaPredicted RBP1.66□□□□□ -2.14
SDH6YDR379C-A GND1P38720 489 aaKnown RBP1.66□□□□□ -2.14
SDH6YDR379C-A YIL152WP40455 235 aa1.66□□□□□ -2.14
SDH6YDR379C-A UBP6P43593 499 aaKnown RBP1.66□□□□□ -2.14
SDH6YDR379C-A TPO3Q06451 622 aa1.66□□□□□ -2.14
SDH6YDR379C-A PER1P25625 357 aa1.65□□□□□ -2.15
SDH6YDR379C-A GSY2P27472 705 aa1.65□□□□□ -2.15
SDH6YDR379C-A PCA1P38360 1216 aa1.65□□□□□ -2.15
SDH6YDR379C-A VRG4P40107 337 aa1.65□□□□□ -2.15
SDH6YDR379C-A THI6P41835 540 aa1.65□□□□□ -2.15
SDH6YDR379C-A HOS2P53096 452 aaPredicted RBP1.65□□□□□ -2.15
SDH6YDR379C-A UTP8P53276 713 aaKnown RBP1.65□□□□□ -2.15
SDH6YDR379C-A IZH3Q07959 543 aa1.65□□□□□ -2.15
SDH6YDR379C-A RSA1Q08932 381 aa1.65□□□□□ -2.15
SDH6YDR379C-A UBX3Q12229 455 aa1.65□□□□□ -2.15
SDH6YDR379C-A AKL1P38080 1108 aaKnown RBP1.64□□□□□ -2.15
SDH6YDR379C-A YFL052WP43551 465 aa1.64□□□□□ -2.15
SDH6YDR379C-A BNA2P47125 453 aa1.64□□□□□ -2.15
SDH6YDR379C-A YFT2Q06676 274 aa1.64□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 84.1 ms