RNA–Protein interactions for RNA: YDR308C

SRB7, Transcript of Subunit of the RNA polymerase II mediator complex, yeast

Gene SRB7, Length 423 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SRB7	YDR308C	HXT7	P39004	570 aa		4.69	□□□□□ -1.66
SRB7	YDR308C	SDS3	P40505	327 aa		4.69	□□□□□ -1.66
SRB7	YDR308C	PXA1	P41909	870 aa		4.69	□□□□□ -1.66
SRB7	YDR308C	BIT61	P47041	543 aa		4.69	□□□□□ -1.66
SRB7	YDR308C	RNR4	P49723	345 aa	Known RBP	4.69	□□□□□ -1.66
SRB7	YDR308C	PPN1	Q04119	674 aa		4.69	□□□□□ -1.66
SRB7	YDR308C	YPS7	Q06325	596 aa		4.69	□□□□□ -1.66
SRB7	YDR308C	THI22	Q06490	572 aa		4.69	□□□□□ -1.66
SRB7	YDR308C	YPR027C	Q12079	277 aa		4.69	□□□□□ -1.66
SRB7	YDR308C	RPS21A	P0C0V8	87 aa	Known RBP	4.68	□□□□□ -1.66
SRB7	YDR308C	HCA4	P20448	770 aa	Known RBP	4.68	□□□□□ -1.66
SRB7	YDR308C	FEN2	P25621	512 aa	Known RBP	4.68	□□□□□ -1.66
SRB7	YDR308C	NTH1	P32356	751 aa		4.68	□□□□□ -1.66
SRB7	YDR308C	BIT2	P38346	545 aa		4.68	□□□□□ -1.66
SRB7	YDR308C	ARG2	P40360	574 aa		4.68	□□□□□ -1.66
SRB7	YDR308C	NDC80	P40460	691 aa		4.68	□□□□□ -1.66
SRB7	YDR308C	RCR2	Q03446	210 aa	Known RBP	4.68	□□□□□ -1.66
SRB7	YDR308C	RGC1	Q06108	1083 aa	Known RBP	4.68	□□□□□ -1.66
SRB7	YDR308C	MLH3	Q12083	715 aa		4.68	□□□□□ -1.66
SRB7	YDR308C	CHS5	Q12114	671 aa	Known RBP	4.68	□□□□□ -1.66
SRB7	YDR308C	TMA17	Q12513	150 aa		4.68	□□□□□ -1.66
SRB7	YDR308C	SIR3	P06701	978 aa		4.67	□□□□□ -1.66
SRB7	YDR308C	PRP28	P23394	588 aa		4.67	□□□□□ -1.66
SRB7	YDR308C	MTH1	P35198	433 aa		4.67	□□□□□ -1.66
SRB7	YDR308C	COS111	P38308	924 aa		4.67	□□□□□ -1.66
SRB7	YDR308C	YHR033W	P38690	423 aa		4.67	□□□□□ -1.66
SRB7	YDR308C	VID28	P40547	921 aa		4.67	□□□□□ -1.66
SRB7	YDR308C	RFX1	P48743	811 aa		4.67	□□□□□ -1.66
SRB7	YDR308C	CTR1	P49573	406 aa		4.67	□□□□□ -1.66
SRB7	YDR308C	SMX3	P54999	86 aa	Predicted RBP	4.67	□□□□□ -1.66
SRB7	YDR308C	HFI1	Q12060	488 aa		4.67	□□□□□ -1.66
SRB7	YDR308C	MRH1	Q12117	320 aa	Predicted RBP	4.67	□□□□□ -1.66
SRB7	YDR308C	SSB1	P11484	613 aa	Known RBP	4.66	□□□□□ -1.66
SRB7	YDR308C	THR1	P17423	357 aa	Known RBP	4.66	□□□□□ -1.66
SRB7	YDR308C	AEP2	P22136	580 aa		4.66	□□□□□ -1.66
SRB7	YDR308C	DMC1	P25453	334 aa		4.66	□□□□□ -1.66
SRB7	YDR308C	DAL3	P32459	195 aa		4.66	□□□□□ -1.66
SRB7	YDR308C	EUG1	P32474	517 aa		4.66	□□□□□ -1.66
SRB7	YDR308C	FAT1	P38225	669 aa		4.66	□□□□□ -1.66
SRB7	YDR308C	YJL206C	P39529	758 aa		4.66	□□□□□ -1.66
SRB7	YDR308C	PEA2	P40091	420 aa		4.66	□□□□□ -1.66
SRB7	YDR308C	SSB2	P40150	613 aa	Known RBP	4.66	□□□□□ -1.66
SRB7	YDR308C	SPC105	P53148	917 aa		4.66	□□□□□ -1.66
SRB7	YDR308C	FHN1	P53279	174 aa		4.66	□□□□□ -1.66
SRB7	YDR308C	ATG4	P53867	494 aa		4.66	□□□□□ -1.66
SRB7	YDR308C	GFA1	P14742	717 aa	Known RBP	4.65	□□□□□ -1.67
SRB7	YDR308C	DGR2	P32330	852 aa		4.65	□□□□□ -1.67
SRB7	YDR308C	GLG1	P36143	616 aa		4.65	□□□□□ -1.67
SRB7	YDR308C	BUD8	P41698	603 aa		4.65	□□□□□ -1.67
SRB7	YDR308C	DUG1	P43616	481 aa	Known RBP	4.65	□□□□□ -1.67
SRB7	YDR308C	MPS3	P47069	682 aa		4.65	□□□□□ -1.67
SRB7	YDR308C	YJR120W	P47157	116 aa		4.65	□□□□□ -1.67
SRB7	YDR308C	TAF4	P50105	388 aa		4.65	□□□□□ -1.67
SRB7	YDR308C	SPO1	P53541	631 aa		4.65	□□□□□ -1.67
SRB7	YDR308C	IRC10	Q08118	586 aa		4.65	□□□□□ -1.67
SRB7	YDR308C	KAR1	P11927	433 aa		4.64	□□□□□ -1.67
SRB7	YDR308C	FUB1	P25659	250 aa		4.64	□□□□□ -1.67
SRB7	YDR308C	YGR151C	P53287	111 aa		4.64	□□□□□ -1.67
SRB7	YDR308C	SPC98	P53540	846 aa		4.64	□□□□□ -1.67
SRB7	YDR308C	YFT2	Q06676	274 aa		4.64	□□□□□ -1.67
SRB7	YDR308C	STP4	Q07351	490 aa		4.64	□□□□□ -1.67
SRB7	YDR308C	YDL086W	Q07505	273 aa		4.64	□□□□□ -1.67
SRB7	YDR308C	APM4	Q99186	491 aa		4.64	□□□□□ -1.67
SRB7	YDR308C	IME1	P21190	360 aa		4.63	□□□□□ -1.67
SRB7	YDR308C	TDP1	P38319	544 aa		4.63	□□□□□ -1.67
SRB7	YDR308C	BDH2	P39713	417 aa		4.63	□□□□□ -1.67
SRB7	YDR308C	ENP2	P48234	707 aa	Known RBP	4.63	□□□□□ -1.67
SRB7	YDR308C	SKY1	Q03656	742 aa		4.63	□□□□□ -1.67
SRB7	YDR308C	YSH1	Q06224	779 aa	Predicted RBP	4.63	□□□□□ -1.67
SRB7	YDR308C	KCC4	P25389	1037 aa		4.62	□□□□□ -1.67
SRB7	YDR308C	SET3	P36124	751 aa		4.62	□□□□□ -1.67
SRB7	YDR308C	APL3	P38065	1025 aa		4.62	□□□□□ -1.67
SRB7	YDR308C	YBR071W	P38243	211 aa		4.62	□□□□□ -1.67
SRB7	YDR308C	IES1	P43579	692 aa		4.62	□□□□□ -1.67
SRB7	YDR308C	PEX14	P53112	341 aa		4.62	□□□□□ -1.67
SRB7	YDR308C	NMA2	P53204	395 aa		4.62	□□□□□ -1.67
SRB7	YDR308C	FOL1	P53848	824 aa		4.62	□□□□□ -1.67
SRB7	YDR308C	SQS1	P53866	767 aa	Known RBP	4.62	□□□□□ -1.67
SRB7	YDR308C	NSE5	Q03718	556 aa		4.62	□□□□□ -1.67
SRB7	YDR308C	SER1	P33330	395 aa	Known RBP	4.61	□□□□□ -1.67
SRB7	YDR308C	GMH1	P36125	273 aa		4.61	□□□□□ -1.67
SRB7	YDR308C	CTP1	P38152	299 aa		4.61	□□□□□ -1.67
SRB7	YDR308C	KSP1	P38691	1029 aa	Known RBP	4.61	□□□□□ -1.67
SRB7	YDR308C	YHR097C	P38809	366 aa	Known RBP	4.61	□□□□□ -1.67
SRB7	YDR308C	GPP2	P40106	250 aa	Known RBP	4.61	□□□□□ -1.67
SRB7	YDR308C	KHA1	P40309	873 aa		4.61	□□□□□ -1.67
SRB7	YDR308C	SLD3	P53135	668 aa		4.61	□□□□□ -1.67
SRB7	YDR308C	DIP5	P53388	608 aa		4.61	□□□□□ -1.67
SRB7	YDR308C	NGL1	Q08213	363 aa	Known RBP	4.61	□□□□□ -1.67
SRB7	YDR308C	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.61	□□□□□ -1.67	not detected
SRB7	YDR308C	COX11	P19516	300 aa	Known RBP	4.6	□□□□□ -1.67
SRB7	YDR308C	PRE4	P30657	266 aa		4.6	□□□□□ -1.67
SRB7	YDR308C	SEC6	P32844	805 aa		4.6	□□□□□ -1.67
SRB7	YDR308C	TFC4	P33339	1025 aa		4.6	□□□□□ -1.67
SRB7	YDR308C	ELF1	P36053	145 aa		4.6	□□□□□ -1.67
SRB7	YDR308C	TMN3	P40071	706 aa		4.6	□□□□□ -1.67
SRB7	YDR308C	NIT2	P47016	307 aa		4.6	□□□□□ -1.67
SRB7	YDR308C	VPS73	P53142	486 aa	Known RBP	4.6	□□□□□ -1.67
SRB7	YDR308C	AIM41	Q12032	185 aa		4.6	□□□□□ -1.67
SRB7	YDR308C	CDC26	P14724	124 aa		4.59	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 63.9 ms