RNA–Protein interactions for RNA: YDR288W

NSE3, Transcript of Component of the SMC5-SMC6 complex, yeast

Gene NSE3, Length 912 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NSE3	YDR288W	UBC11	P52492	156 aa		5.67	□□□□□ -1.5
NSE3	YDR288W	POM34	Q12445	299 aa		5.67	□□□□□ -1.5
NSE3	YDR288W	HEM12	P32347	362 aa	Predicted RBP	5.66	□□□□□ -1.5
NSE3	YDR288W	DAS1	P47005	663 aa		5.66	□□□□□ -1.5
NSE3	YDR288W	MSE1	P48525	536 aa		5.66	□□□□□ -1.5
NSE3	YDR288W	KIN4	Q01919	800 aa		5.66	□□□□□ -1.5
NSE3	YDR288W	PEX15	Q08215	383 aa		5.66	□□□□□ -1.5
NSE3	YDR288W	YHR033W	P38690	423 aa		5.65	□□□□□ -1.5
NSE3	YDR288W	PIG2	P40187	538 aa		5.65	□□□□□ -1.5
NSE3	YDR288W	IES1	P43579	692 aa		5.65	□□□□□ -1.5
NSE3	YDR288W	BIT61	P47041	543 aa		5.65	□□□□□ -1.5
NSE3	YDR288W	TAF4	P50105	388 aa		5.65	□□□□□ -1.5
NSE3	YDR288W	HOL1	P53389	586 aa		5.65	□□□□□ -1.5
NSE3	YDR288W	STP4	Q07351	490 aa		5.65	□□□□□ -1.5
NSE3	YDR288W	NGL1	Q08213	363 aa	Known RBP	5.65	□□□□□ -1.5
NSE3	YDR288W	YOL057W	Q08225	711 aa		5.65	□□□□□ -1.5
NSE3	YDR288W	SLX4	Q12098	748 aa		5.65	□□□□□ -1.5
NSE3	YDR288W	CLF1	Q12309	687 aa	Predicted RBP	5.65	□□□□□ -1.5
NSE3	YDR288W	ZRT2	Q12436	422 aa		5.65	□□□□□ -1.5
NSE3	YDR288W	YKL033W-A	Q86ZR7	236 aa		5.65	□□□□□ -1.5
NSE3	YDR288W	ATP12	P22135	325 aa		5.64	□□□□□ -1.51
NSE3	YDR288W	SFB3	P38810	929 aa		5.64	□□□□□ -1.51
NSE3	YDR288W	FMP52	P40008	231 aa		5.64	□□□□□ -1.51
NSE3	YDR288W	NOP2	P40991	618 aa	Known RBP	5.64	□□□□□ -1.51
NSE3	YDR288W	BUD8	P41698	603 aa		5.64	□□□□□ -1.51
NSE3	YDR288W	SUN4	P53616	420 aa		5.64	□□□□□ -1.51
NSE3	YDR288W	RCR2	Q03446	210 aa	Known RBP	5.64	□□□□□ -1.51
NSE3	YDR288W	YMR206W	Q03695	313 aa		5.64	□□□□□ -1.51
NSE3	YDR288W	ECM38	Q05902	660 aa	Predicted RBP	5.64	□□□□□ -1.51
NSE3	YDR288W	NYV1	Q12255	253 aa		5.64	□□□□□ -1.51
NSE3	YDR288W	CDC26	P14724	124 aa		5.63	□□□□□ -1.51
NSE3	YDR288W	PPS1	P38148	807 aa		5.63	□□□□□ -1.51
NSE3	YDR288W	SRP68	P38687	599 aa	Known RBP	5.63	□□□□□ -1.51
NSE3	YDR288W	YIL077C	P40508	320 aa		5.63	□□□□□ -1.51
NSE3	YDR288W	PAN2	P53010	1115 aa	Predicted RBP	5.63	□□□□□ -1.51
NSE3	YDR288W	RIA1	P53893	1110 aa		5.63	□□□□□ -1.51
NSE3	YDR288W	YNL034W	P53963	612 aa		5.63	□□□□□ -1.51
NSE3	YDR288W	YNL018C	P53976	612 aa		5.63	□□□□□ -1.51
NSE3	YDR288W	NSE5	Q03718	556 aa		5.63	□□□□□ -1.51
NSE3	YDR288W	THI22	Q06490	572 aa		5.63	□□□□□ -1.51
NSE3	YDR288W	CWC2	Q12046	339 aa	Predicted RBP	5.63	□□□□□ -1.51
NSE3	YDR288W	MPD2	Q99316	277 aa		5.63	□□□□□ -1.51
NSE3	YDR288W	IME1	P21190	360 aa		5.62	□□□□□ -1.51
NSE3	YDR288W	HXT4	P32467	576 aa		5.62	□□□□□ -1.51
NSE3	YDR288W	COS111	P38308	924 aa		5.62	□□□□□ -1.51
NSE3	YDR288W	YAP1802	P53309	568 aa		5.62	□□□□□ -1.51
NSE3	YDR288W	SPO1	P53541	631 aa		5.62	□□□□□ -1.51
NSE3	YDR288W	GSF2	Q04697	403 aa	Known RBP	5.62	□□□□□ -1.51
NSE3	YDR288W	PUS9	Q12069	462 aa		5.62	□□□□□ -1.51
NSE3	YDR288W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	5.61	□□□□□ -1.51	not detected
NSE3	YDR288W	FEN2	P25621	512 aa	Known RBP	5.61	□□□□□ -1.51
NSE3	YDR288W	MF(ALPHA)2	P32435	120 aa		5.61	□□□□□ -1.51
NSE3	YDR288W	HIR1	P32479	840 aa		5.61	□□□□□ -1.51
NSE3	YDR288W	BCS1	P32839	456 aa		5.61	□□□□□ -1.51
NSE3	YDR288W	NIC96	P34077	839 aa		5.61	□□□□□ -1.51
NSE3	YDR288W	CBR1	P38626	284 aa	Known RBP	5.61	□□□□□ -1.51
NSE3	YDR288W	TEL2	P53038	688 aa		5.61	□□□□□ -1.51
NSE3	YDR288W	SQS1	P53866	767 aa	Known RBP	5.61	□□□□□ -1.51
NSE3	YDR288W	PRP28	P23394	588 aa		5.6	□□□□□ -1.51
NSE3	YDR288W	TAN1	P53072	289 aa	Predicted RBP	5.6	□□□□□ -1.51
NSE3	YDR288W	SSL2	Q00578	843 aa		5.6	□□□□□ -1.51
NSE3	YDR288W	TIM44	Q01852	431 aa		5.6	□□□□□ -1.51
NSE3	YDR288W	CHS5	Q12114	671 aa	Known RBP	5.6	□□□□□ -1.51
NSE3	YDR288W	ACF2	Q12168	779 aa		5.6	□□□□□ -1.51
NSE3	YDR288W	YEL076C-A	P0CX16	216 aa		5.59	□□□□□ -1.51
NSE3	YDR288W	YLR464W	P0CX17	216 aa		5.59	□□□□□ -1.51
NSE3	YDR288W	YEF3	P16521	1044 aa	Known RBP	5.59	□□□□□ -1.51
NSE3	YDR288W	NTH1	P32356	751 aa		5.59	□□□□□ -1.51
NSE3	YDR288W	YPT7	P32939	208 aa		5.59	□□□□□ -1.51
NSE3	YDR288W	PHO11	P35842	467 aa		5.59	□□□□□ -1.51
NSE3	YDR288W	PHO12	P38693	467 aa		5.59	□□□□□ -1.51
NSE3	YDR288W	YHL017W	P38745	532 aa		5.59	□□□□□ -1.51
NSE3	YDR288W	PCL5	P38794	229 aa		5.59	□□□□□ -1.51
NSE3	YDR288W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	5.59	□□□□□ -1.51	not detected
NSE3	YDR288W	YEL076C	P39971	216 aa		5.59	□□□□□ -1.51
NSE3	YDR288W	RTS3	P53289	263 aa		5.59	□□□□□ -1.51
NSE3	YDR288W	AIM41	Q12032	185 aa		5.59	□□□□□ -1.51
NSE3	YDR288W	SST2	P11972	698 aa	Known RBP	5.58	□□□□□ -1.52
NSE3	YDR288W	ABF1	P14164	731 aa		5.58	□□□□□ -1.52
NSE3	YDR288W	PRE4	P30657	266 aa		5.58	□□□□□ -1.52
NSE3	YDR288W	STL1	P39932	569 aa		5.58	□□□□□ -1.52
NSE3	YDR288W	RFX1	P48743	811 aa		5.58	□□□□□ -1.52
NSE3	YDR288W	MDR1	P53258	950 aa		5.58	□□□□□ -1.52
NSE3	YDR288W	TGL2	P54857	326 aa		5.58	□□□□□ -1.52
NSE3	YDR288W	RGC1	Q06108	1083 aa	Known RBP	5.58	□□□□□ -1.52
NSE3	YDR288W	YFT2	Q06676	274 aa		5.58	□□□□□ -1.52
NSE3	YDR288W	SIR3	P06701	978 aa		5.57	□□□□□ -1.52
NSE3	YDR288W	YKL133C	P36066	463 aa		5.57	□□□□□ -1.52
NSE3	YDR288W	EAF5	P39995	279 aa		5.57	□□□□□ -1.52
NSE3	YDR288W	YIL092W	P40497	633 aa		5.57	□□□□□ -1.52
NSE3	YDR288W	PRM2	P40534	656 aa		5.57	□□□□□ -1.52
NSE3	YDR288W	IRC5	P43610	853 aa		5.57	□□□□□ -1.52
NSE3	YDR288W	OMS1	Q06668	471 aa		5.57	□□□□□ -1.52
NSE3	YDR288W	HBT1	Q07653	1046 aa	Known RBP	5.57	□□□□□ -1.52
NSE3	YDR288W	YOR378W	Q08902	515 aa		5.57	□□□□□ -1.52
NSE3	YDR288W	PNS1	Q12412	539 aa		5.57	□□□□□ -1.52
NSE3	YDR288W	ATP4	P05626	244 aa		5.56	□□□□□ -1.52
NSE3	YDR288W	SEC6	P32844	805 aa		5.56	□□□□□ -1.52
NSE3	YDR288W	SAW1	P39735	261 aa		5.56	□□□□□ -1.52
NSE3	YDR288W	MPS3	P47069	682 aa		5.56	□□□□□ -1.52

Retrieved 100 of 5,963 RNA–protein pairs in 121 ms