RNA–Protein interactions for RNA: YDR078C

SHU2, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU2, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU2YDR078C PLB1P39105 664 aa4.78□□□□□ -1.64
SHU2YDR078C SAW1P39735 261 aa4.78□□□□□ -1.64
SHU2YDR078C STL1P39932 569 aa4.78□□□□□ -1.64
SHU2YDR078C ACA1P39970 489 aa4.78□□□□□ -1.64
SHU2YDR078C ASK10P48361 1146 aa4.78□□□□□ -1.64
SHU2YDR078C NRG1Q03125 231 aa4.78□□□□□ -1.64
SHU2YDR078C RCR2Q03446 210 aaKnown RBP4.78□□□□□ -1.64
SHU2YDR078C YDL121CQ07541 149 aa4.78□□□□□ -1.64
SHU2YDR078C VHS3Q08438 674 aa4.78□□□□□ -1.64
SHU2YDR078C FRS1P15624 595 aaKnown RBP4.77□□□□□ -1.65
SHU2YDR078C PHO81P17442 1178 aa4.77□□□□□ -1.65
SHU2YDR078C SPT20P50875 604 aa4.77□□□□□ -1.65
SHU2YDR078C NSE5Q03718 556 aa4.77□□□□□ -1.65
SHU2YDR078C HLR1Q04429 423 aa4.77□□□□□ -1.65
SHU2YDR078C YLR224WQ05947 369 aa4.77□□□□□ -1.65
SHU2YDR078C BRE1Q07457 700 aaKnown RBP4.77□□□□□ -1.65
SHU2YDR078C PSR2Q07949 397 aa4.77□□□□□ -1.65
SHU2YDR078C PSF3Q12146 194 aa4.77□□□□□ -1.65
SHU2YDR078C YEL076C-AP0CX16 216 aa4.76□□□□□ -1.65
SHU2YDR078C YLR464WP0CX17 216 aa4.76□□□□□ -1.65
SHU2YDR078C KAR4P25583 335 aa4.76□□□□□ -1.65
SHU2YDR078C DBF20P32328 564 aa4.76□□□□□ -1.65
SHU2YDR078C PET309P32522 965 aaPredicted RBP4.76□□□□□ -1.65
SHU2YDR078C YPT7P32939 208 aa4.76□□□□□ -1.65
SHU2YDR078C SDS22P36047 338 aa4.76□□□□□ -1.65
SHU2YDR078C MPT5P39016 859 aaKnown RBP RIP-Chip data4.76□□□□□ -1.65not detected
SHU2YDR078C YEL076CP39971 216 aa4.76□□□□□ -1.65
SHU2YDR078C BUD8P41698 603 aa4.76□□□□□ -1.65
SHU2YDR078C SVL3Q03088 825 aaKnown RBP4.76□□□□□ -1.65
SHU2YDR078C GAD1Q04792 585 aa4.76□□□□□ -1.65
SHU2YDR078C SGO1Q08490 590 aa4.76□□□□□ -1.65
SHU2YDR078C TGL5Q12043 749 aa4.76□□□□□ -1.65
SHU2YDR078C ARP7Q12406 477 aa4.76□□□□□ -1.65
SHU2YDR078C NKP1Q12493 238 aa4.76□□□□□ -1.65
SHU2YDR078C RNR1P21524 888 aaKnown RBP4.75□□□□□ -1.65
SHU2YDR078C SSP120P39931 234 aaKnown RBP4.75□□□□□ -1.65
SHU2YDR078C SAP185P40856 1058 aa4.75□□□□□ -1.65
SHU2YDR078C TAF4P50105 388 aa4.75□□□□□ -1.65
SHU2YDR078C COX18P53239 316 aa4.75□□□□□ -1.65
SHU2YDR078C MRPS35P53292 345 aa4.75□□□□□ -1.65
SHU2YDR078C TEX1P53851 422 aaKnown RBP4.75□□□□□ -1.65
SHU2YDR078C TEP1P53916 434 aa4.75□□□□□ -1.65
SHU2YDR078C VBA4Q04602 768 aaKnown RBP4.75□□□□□ -1.65
SHU2YDR078C VPS36Q06696 566 aa4.75□□□□□ -1.65
SHU2YDR078C ERG20P08524 352 aaKnown RBP4.74□□□□□ -1.65
SHU2YDR078C TGL1P34163 548 aa4.74□□□□□ -1.65
SHU2YDR078C EXO84P38261 753 aa4.74□□□□□ -1.65
SHU2YDR078C SCS2P40075 244 aaKnown RBP4.74□□□□□ -1.65
SHU2YDR078C YNL195CP40168 261 aa4.74□□□□□ -1.65
SHU2YDR078C PXA1P41909 870 aa4.74□□□□□ -1.65
SHU2YDR078C ERG5P54781 538 aa4.74□□□□□ -1.65
SHU2YDR078C PPN1Q04119 674 aa4.74□□□□□ -1.65
SHU2YDR078C VPS5Q92331 675 aa4.74□□□□□ -1.65
SHU2YDR078C HRP1Q99383 534 aaKnown RBP4.74□□□□□ -1.65
SHU2YDR078C MSM1P22438 575 aa4.73□□□□□ -1.65
SHU2YDR078C CAD1P24813 409 aaKnown RBP4.73□□□□□ -1.65
SHU2YDR078C ERG6P25087 383 aaKnown RBP4.73□□□□□ -1.65
SHU2YDR078C YHR033WP38690 423 aa4.73□□□□□ -1.65
SHU2YDR078C RPT2P40327 437 aaKnown RBP4.73□□□□□ -1.65
SHU2YDR078C BIT61P47041 543 aa4.73□□□□□ -1.65
SHU2YDR078C NOP9P47077 666 aaKnown RBP4.73□□□□□ -1.65
SHU2YDR078C SLI1P53304 468 aa4.73□□□□□ -1.65
SHU2YDR078C MOT3P54785 490 aaKnown RBP4.73□□□□□ -1.65
SHU2YDR078C HIM1Q06674 414 aa4.73□□□□□ -1.65
SHU2YDR078C ENB1Q08299 606 aa4.73□□□□□ -1.65
SHU2YDR078C PUS9Q12069 462 aa4.73□□□□□ -1.65
SHU2YDR078C RTK1Q12100 620 aaPredicted RBP4.73□□□□□ -1.65
SHU2YDR078C ATG11Q12527 1178 aa4.73□□□□□ -1.65
SHU2YDR078C ECM3Q99252 613 aa4.73□□□□□ -1.65
SHU2YDR078C VAS1P07806 1104 aaKnown RBP4.72□□□□□ -1.65
SHU2YDR078C ADH4P10127 382 aa4.72□□□□□ -1.65
SHU2YDR078C SEC18P18759 758 aaKnown RBP4.72□□□□□ -1.65
SHU2YDR078C PRP22P24384 1145 aaKnown RBP4.72□□□□□ -1.65
SHU2YDR078C MSH1P25846 959 aa4.72□□□□□ -1.65
SHU2YDR078C LST4P34239 828 aa4.72□□□□□ -1.65
SHU2YDR078C SWD1P39706 426 aa4.72□□□□□ -1.65
SHU2YDR078C VPS27P40343 622 aaKnown RBP4.72□□□□□ -1.65
SHU2YDR078C MAD2P40958 196 aa4.72□□□□□ -1.65
SHU2YDR078C FKH2P41813 862 aa4.72□□□□□ -1.65
SHU2YDR078C MNT2P53059 558 aa4.72□□□□□ -1.65
SHU2YDR078C PEF1P53238 335 aa4.72□□□□□ -1.65
SHU2YDR078C CTK1Q03957 528 aaKnown RBP4.72□□□□□ -1.65
SHU2YDR078C CIA1Q05583 330 aa4.72□□□□□ -1.65
SHU2YDR078C POM34Q12445 299 aa4.72□□□□□ -1.65
SHU2YDR078C STE11P23561 717 aa4.71□□□□□ -1.66
SHU2YDR078C KIN82P25341 720 aa4.71□□□□□ -1.66
SHU2YDR078C PRE4P30657 266 aa4.71□□□□□ -1.66
SHU2YDR078C MTC7P32633 139 aa4.71□□□□□ -1.66
SHU2YDR078C TAF5P38129 798 aa4.71□□□□□ -1.66
SHU2YDR078C LYS9P38999 446 aa4.71□□□□□ -1.66
SHU2YDR078C GET2P40056 285 aa4.71□□□□□ -1.66
SHU2YDR078C PRM2P40534 656 aa4.71□□□□□ -1.66
SHU2YDR078C IMA5P40884 581 aa4.71□□□□□ -1.66
SHU2YDR078C MAD3P47074 515 aa4.71□□□□□ -1.66
SHU2YDR078C SPO1P53541 631 aa4.71□□□□□ -1.66
SHU2YDR078C YML131WQ03102 365 aa4.71□□□□□ -1.66
SHU2YDR078C TMA64Q04600 565 aaKnown RBP4.71□□□□□ -1.66
SHU2YDR078C DIN7Q12086 430 aa4.71□□□□□ -1.66
SHU2YDR078C LAS17Q12446 633 aa4.71□□□□□ -1.66
SHU2YDR078C LAT1P12695 482 aaKnown RBP4.7□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 32 ms