RNA–Protein interactions for RNA: YDR075W

PPH3, Transcript of Catalytic subunit of protein phosphatase PP4 complex, yeast

Gene PPH3, Length 927 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PPH3	YDR075W	UBC9	P50623	157 aa	Predicted RBP	4.11	□□□□□ -1.75
PPH3	YDR075W	SNU71	P53207	620 aa	Known RBP	4.11	□□□□□ -1.75
PPH3	YDR075W	FHN1	P53279	174 aa		4.11	□□□□□ -1.75
PPH3	YDR075W	USO1	P25386	1790 aa		4.1	□□□□□ -1.75
PPH3	YDR075W	HOM2	P13663	365 aa	Known RBP	4.1	□□□□□ -1.75
PPH3	YDR075W	VPS34	P22543	875 aa		4.1	□□□□□ -1.75
PPH3	YDR075W	YHR112C	P38716	378 aa		4.1	□□□□□ -1.75
PPH3	YDR075W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.1	□□□□□ -1.75	not detected
PPH3	YDR075W	YGR125W	P53273	1036 aa		4.1	□□□□□ -1.75
PPH3	YDR075W	IMH1	Q06704	911 aa	Known RBP	4.1	□□□□□ -1.75
PPH3	YDR075W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected
PPH3	YDR075W	ADE2	P21264	571 aa	Known RBP	4.09	□□□□□ -1.75
PPH3	YDR075W	CCR4	P31384	837 aa	Known RBP	4.09	□□□□□ -1.75
PPH3	YDR075W	SPC29	P33419	253 aa		4.09	□□□□□ -1.75
PPH3	YDR075W	PHO11	P35842	467 aa		4.09	□□□□□ -1.75
PPH3	YDR075W	APL2	P36000	726 aa	Predicted RBP	4.09	□□□□□ -1.75
PPH3	YDR075W	PHO12	P38693	467 aa		4.09	□□□□□ -1.75
PPH3	YDR075W	RIM13	Q03792	727 aa		4.09	□□□□□ -1.75
PPH3	YDR075W	MLH3	Q12083	715 aa		4.09	□□□□□ -1.75
PPH3	YDR075W	PSK1	P31374	1356 aa		4.08	□□□□□ -1.76
PPH3	YDR075W	BET3	P36149	193 aa		4.08	□□□□□ -1.76
PPH3	YDR075W	TRZ1	P36159	838 aa	Predicted RBP	4.08	□□□□□ -1.76
PPH3	YDR075W	TY4A-J	P47023	414 aa		4.08	□□□□□ -1.76
PPH3	YDR075W	MRK1	P50873	501 aa		4.08	□□□□□ -1.76
PPH3	YDR075W	ARG5,6	Q01217	863 aa		4.08	□□□□□ -1.76
PPH3	YDR075W	SEG1	Q04279	960 aa		4.08	□□□□□ -1.76
PPH3	YDR075W	OSW1	Q08692	278 aa		4.08	□□□□□ -1.76
PPH3	YDR075W	RPS24A	P0CX31	135 aa	Known RBP	4.07	□□□□□ -1.76
PPH3	YDR075W	RPS24B	P0CX32	135 aa	Known RBP	4.07	□□□□□ -1.76
PPH3	YDR075W	TIM54	P47045	478 aa		4.07	□□□□□ -1.76
PPH3	YDR075W	SLM3	Q12093	417 aa		4.07	□□□□□ -1.76
PPH3	YDR075W	HRP1	Q99383	534 aa	Known RBP	4.07	□□□□□ -1.76
PPH3	YDR075W	NUP192	P47054	1683 aa		4.06	□□□□□ -1.76
PPH3	YDR075W	ADE6	P38972	1358 aa	Known RBP	4.06	□□□□□ -1.76
PPH3	YDR075W	ERG6	P25087	383 aa	Known RBP	4.06	□□□□□ -1.76
PPH3	YDR075W	PER1	P25625	357 aa		4.06	□□□□□ -1.76
PPH3	YDR075W	ALY2	P47029	1046 aa		4.06	□□□□□ -1.76
PPH3	YDR075W	ORC4	P54791	529 aa		4.06	□□□□□ -1.76
PPH3	YDR075W	YDR338C	Q05497	695 aa		4.06	□□□□□ -1.76
PPH3	YDR075W	RGC1	Q06108	1083 aa	Known RBP	4.06	□□□□□ -1.76
PPH3	YDR075W	MCM21	Q06675	368 aa		4.06	□□□□□ -1.76
PPH3	YDR075W	SLK19	Q08581	821 aa	Known RBP	4.06	□□□□□ -1.76
PPH3	YDR075W	FLC1	Q08967	793 aa		4.06	□□□□□ -1.76
PPH3	YDR075W	ZRT2	Q12436	422 aa		4.06	□□□□□ -1.76
PPH3	YDR075W	APT2	P36973	181 aa		4.05	□□□□□ -1.76
PPH3	YDR075W	YHR020W	P38708	688 aa	Known RBP	4.05	□□□□□ -1.76
PPH3	YDR075W	MUP3	P38734	546 aa		4.05	□□□□□ -1.76
PPH3	YDR075W	DOT5	P40553	215 aa		4.05	□□□□□ -1.76
PPH3	YDR075W	GAT1	P43574	510 aa		4.05	□□□□□ -1.76
PPH3	YDR075W	YEF3	P16521	1044 aa	Known RBP	4.04	□□□□□ -1.76
PPH3	YDR075W	THR1	P17423	357 aa	Known RBP	4.04	□□□□□ -1.76
PPH3	YDR075W	FUB1	P25659	250 aa		4.04	□□□□□ -1.76
PPH3	YDR075W	GMH1	P36125	273 aa		4.04	□□□□□ -1.76
PPH3	YDR075W	PAM1	P37304	830 aa	Known RBP	4.04	□□□□□ -1.76
PPH3	YDR075W	RPN11	P43588	306 aa	Known RBP	4.04	□□□□□ -1.76
PPH3	YDR075W	BNA3	P47039	444 aa	Known RBP	4.04	□□□□□ -1.76
PPH3	YDR075W	RTA1	P53047	317 aa		4.04	□□□□□ -1.76
PPH3	YDR075W	USV1	Q12132	391 aa		4.04	□□□□□ -1.76
PPH3	YDR075W	PTP1	P25044	335 aa		4.03	□□□□□ -1.76
PPH3	YDR075W	CLF1	Q12309	687 aa	Predicted RBP	4.03	□□□□□ -1.76
PPH3	YDR075W	CAN1	P04817	590 aa		4.02	□□□□□ -1.77
PPH3	YDR075W	YKL133C	P36066	463 aa		4.02	□□□□□ -1.77
PPH3	YDR075W	SET3	P36124	751 aa		4.02	□□□□□ -1.77
PPH3	YDR075W	ENP1	P38333	483 aa	Known RBP	4.02	□□□□□ -1.77
PPH3	YDR075W	MIP6	P38760	659 aa	Known RBP	4.02	□□□□□ -1.77
PPH3	YDR075W	CRP1	P38845	465 aa	Known RBP	4.02	□□□□□ -1.77
PPH3	YDR075W	RSP5	P39940	809 aa	Known RBP	4.02	□□□□□ -1.77
PPH3	YDR075W	BNA2	P47125	453 aa		4.02	□□□□□ -1.77
PPH3	YDR075W	YLR149C	Q99296	730 aa		4.02	□□□□□ -1.77
PPH3	YDR075W	YLR419W	Q06698	1435 aa	Known RBP	4.02	□□□□□ -1.77
PPH3	YDR075W	RPA135	P22138	1203 aa	Known RBP	4.01	□□□□□ -1.77
PPH3	YDR075W	KCC4	P25389	1037 aa		4.01	□□□□□ -1.77
PPH3	YDR075W	NPR2	P39923	615 aa		4.01	□□□□□ -1.77
PPH3	YDR075W	GET2	P40056	285 aa		4.01	□□□□□ -1.77
PPH3	YDR075W	LTP1	P40347	161 aa		4.01	□□□□□ -1.77
PPH3	YDR075W	LYS4	P49367	693 aa	Predicted RBP	4.01	□□□□□ -1.77
PPH3	YDR075W	PDS5	Q04264	1277 aa		4.01	□□□□□ -1.77
PPH3	YDR075W	YML133C	Q03099	1374 aa		4.01	□□□□□ -1.77
PPH3	YDR075W	YLL067C	Q07888	1374 aa		4.01	□□□□□ -1.77
PPH3	YDR075W	YLL066C	Q99208	1374 aa		4.01	□□□□□ -1.77
PPH3	YDR075W	PGK1	P00560	416 aa	Known RBP	4	□□□□□ -1.77
PPH3	YDR075W	ERG11	P10614	530 aa		4	□□□□□ -1.77
PPH3	YDR075W	PEX1	P24004	1043 aa		4	□□□□□ -1.77
PPH3	YDR075W	YFL052W	P43551	465 aa		4	□□□□□ -1.77
PPH3	YDR075W	NET1	P47035	1189 aa		4	□□□□□ -1.77
PPH3	YDR075W	REC102	Q02721	264 aa		4	□□□□□ -1.77
PPH3	YDR075W	HMO1	Q03973	246 aa	Known RBP	4	□□□□□ -1.77
PPH3	YDR075W	RSF2	P46974	1380 aa		4	□□□□□ -1.77
PPH3	YDR075W	RNR1	P21524	888 aa	Known RBP	3.99	□□□□□ -1.77
PPH3	YDR075W	GRX4	P32642	244 aa		3.99	□□□□□ -1.77
PPH3	YDR075W	HUL5	P53119	910 aa		3.99	□□□□□ -1.77
PPH3	YDR075W	TAP42	Q04372	366 aa		3.99	□□□□□ -1.77
PPH3	YDR075W	HIM1	Q06674	414 aa		3.99	□□□□□ -1.77
PPH3	YDR075W	Q0142	Q9ZZW4	58 aa		3.99	□□□□□ -1.77
PPH3	YDR075W	MTC2	P34246	357 aa		3.98	□□□□□ -1.77
PPH3	YDR075W	YKR075C	P36155	307 aa		3.98	□□□□□ -1.77
PPH3	YDR075W	XBP1	P40489	647 aa		3.98	□□□□□ -1.77
PPH3	YDR075W	YJL049W	P47048	450 aa		3.98	□□□□□ -1.77
PPH3	YDR075W	SCS3	P53012	380 aa		3.98	□□□□□ -1.77
PPH3	YDR075W	YGR151C	P53287	111 aa		3.98	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms