RNA–Protein interactions for RNA: YDR052C

DBF4, Transcript of Regulatory subunit of Cdc7p-Dbf4p kinase complex, yeast

Gene DBF4, Length 2,115 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBF4	YDR052C	GCN5	Q03330	439 aa		5.41	□□□□□ -1.54
DBF4	YDR052C	ARX1	Q03862	593 aa	Known RBP	5.41	□□□□□ -1.54
DBF4	YDR052C	RVB1	Q03940	463 aa	Known RBP	5.41	□□□□□ -1.54
DBF4	YDR052C	SHE9	Q04172	456 aa		5.41	□□□□□ -1.54
DBF4	YDR052C	GFD1	Q04839	188 aa	Known RBP	5.41	□□□□□ -1.54
DBF4	YDR052C	TOS4	Q06266	489 aa		5.41	□□□□□ -1.54
DBF4	YDR052C	YPR022C	Q12139	1133 aa		5.41	□□□□□ -1.54
DBF4	YDR052C	PGA3	Q12746	312 aa	Known RBP	5.41	□□□□□ -1.54
DBF4	YDR052C	RSF2	P46974	1380 aa		5.41	□□□□□ -1.54
DBF4	YDR052C	STI1	P15705	589 aa	Known RBP RIP-Chip data	5.41	□□□□□ -1.54	not detected
DBF4	YDR052C	HNM1	P19807	563 aa		5.41	□□□□□ -1.54
DBF4	YDR052C	KIN3	P22209	435 aa		5.41	□□□□□ -1.54
DBF4	YDR052C	GSY1	P23337	708 aa		5.41	□□□□□ -1.54
DBF4	YDR052C	VPS3	P23643	1011 aa		5.41	□□□□□ -1.54
DBF4	YDR052C	SWI4	P25302	1093 aa	Known RBP	5.41	□□□□□ -1.54
DBF4	YDR052C	YKL050C	P35736	922 aa		5.41	□□□□□ -1.54
DBF4	YDR052C	UBP11	P36026	717 aa		5.41	□□□□□ -1.54
DBF4	YDR052C	GLG1	P36143	616 aa		5.41	□□□□□ -1.54
DBF4	YDR052C	MAK5	P38112	773 aa	Predicted RBP	5.41	□□□□□ -1.54
DBF4	YDR052C	YHL017W	P38745	532 aa		5.41	□□□□□ -1.54
DBF4	YDR052C	YER137C	P40083	148 aa	Known RBP	5.41	□□□□□ -1.54
DBF4	YDR052C	SPO22	P40511	975 aa		5.41	□□□□□ -1.54
DBF4	YDR052C	CNN1	P43618	361 aa		5.41	□□□□□ -1.54
DBF4	YDR052C	UTP8	P53276	713 aa	Known RBP	5.41	□□□□□ -1.54
DBF4	YDR052C	PHM6	Q05637	104 aa		5.41	□□□□□ -1.54
DBF4	YDR052C	GIC2	Q06648	383 aa		5.41	□□□□□ -1.54
DBF4	YDR052C	ADY3	Q07732	790 aa		5.41	□□□□□ -1.54
DBF4	YDR052C	BAG7	Q12128	409 aa		5.41	□□□□□ -1.54
DBF4	YDR052C	EMP46	Q12396	444 aa		5.41	□□□□□ -1.54
DBF4	YDR052C	FAS2	P19097	1887 aa	Known RBP	5.4	□□□□□ -1.54
DBF4	YDR052C	CYB2	P00175	591 aa		5.4	□□□□□ -1.54
DBF4	YDR052C	CLN3	P13365	580 aa		5.4	□□□□□ -1.54
DBF4	YDR052C	PMA2	P19657	947 aa		5.4	□□□□□ -1.54
DBF4	YDR052C	CAD1	P24813	409 aa	Known RBP	5.4	□□□□□ -1.54
DBF4	YDR052C	PWP2	P25635	923 aa	Known RBP	5.4	□□□□□ -1.54
DBF4	YDR052C	KRE2	P27809	442 aa		5.4	□□□□□ -1.54
DBF4	YDR052C	MYO3	P36006	1272 aa		5.4	□□□□□ -1.54
DBF4	YDR052C	RDH54	P38086	958 aa		5.4	□□□□□ -1.54
DBF4	YDR052C	TDP1	P38319	544 aa		5.4	□□□□□ -1.54
DBF4	YDR052C	SLX8	P40072	274 aa		5.4	□□□□□ -1.54
DBF4	YDR052C	YIL077C	P40508	320 aa		5.4	□□□□□ -1.54
DBF4	YDR052C	SER33	P40510	469 aa		5.4	□□□□□ -1.54
DBF4	YDR052C	IRC6	P43615	237 aa		5.4	□□□□□ -1.54
DBF4	YDR052C	DSD1	P53095	428 aa		5.4	□□□□□ -1.54
DBF4	YDR052C	YNR063W	P53749	607 aa		5.4	□□□□□ -1.54
DBF4	YDR052C	RPT6	Q01939	405 aa	Known RBP	5.4	□□□□□ -1.54
DBF4	YDR052C	TBF1	Q02457	562 aa		5.4	□□□□□ -1.54
DBF4	YDR052C	TFB3	Q03290	321 aa		5.4	□□□□□ -1.54
DBF4	YDR052C	RPN4	Q03465	531 aa		5.4	□□□□□ -1.54
DBF4	YDR052C	ACL4	Q03771	387 aa		5.4	□□□□□ -1.54
DBF4	YDR052C	MTC5	Q03897	1148 aa		5.4	□□□□□ -1.54
DBF4	YDR052C	UTP5	Q04177	643 aa	Known RBP	5.4	□□□□□ -1.54
DBF4	YDR052C	YMR114C	Q04471	368 aa	Known RBP	5.4	□□□□□ -1.54
DBF4	YDR052C	DBP9	Q06218	594 aa	Known RBP	5.4	□□□□□ -1.54
DBF4	YDR052C	VIP1	Q06685	1146 aa	Known RBP	5.4	□□□□□ -1.54
DBF4	YDR052C	RRP36	Q12481	300 aa	Predicted RBP	5.4	□□□□□ -1.54
DBF4	YDR052C	ENT1	Q12518	454 aa		5.4	□□□□□ -1.54
DBF4	YDR052C	RPC53	P25441	422 aa		5.39	□□□□□ -1.55
DBF4	YDR052C	RAD24	P32641	659 aa		5.39	□□□□□ -1.55
DBF4	YDR052C	RPT5	P33297	434 aa	Known RBP	5.39	□□□□□ -1.55
DBF4	YDR052C	TEF4	P36008	412 aa	Known RBP	5.39	□□□□□ -1.55
DBF4	YDR052C	SPC42	P36094	363 aa		5.39	□□□□□ -1.55
DBF4	YDR052C	SET3	P36124	751 aa		5.39	□□□□□ -1.55
DBF4	YDR052C	ECM31	P38122	312 aa		5.39	□□□□□ -1.55
DBF4	YDR052C	MTG2	P38860	518 aa		5.39	□□□□□ -1.55
DBF4	YDR052C	RCY1	P39531	840 aa		5.39	□□□□□ -1.55
DBF4	YDR052C	SER3	P40054	469 aa		5.39	□□□□□ -1.55
DBF4	YDR052C	EMW1	P42842	904 aa	Known RBP	5.39	□□□□□ -1.55
DBF4	YDR052C	MIG2	P53035	382 aa		5.39	□□□□□ -1.55
DBF4	YDR052C	RMR1	P53060	241 aa		5.39	□□□□□ -1.55
DBF4	YDR052C	DRN1	P53255	507 aa	Known RBP	5.39	□□□□□ -1.55
DBF4	YDR052C	MRPS35	P53292	345 aa		5.39	□□□□□ -1.55
DBF4	YDR052C	ORC3	P54790	616 aa		5.39	□□□□□ -1.55
DBF4	YDR052C	OSH6	Q02201	448 aa		5.39	□□□□□ -1.55
DBF4	YDR052C	INA17	Q02888	182 aa		5.39	□□□□□ -1.55
DBF4	YDR052C	UME1	Q03010	460 aa		5.39	□□□□□ -1.55
DBF4	YDR052C	SMP3	Q04174	516 aa		5.39	□□□□□ -1.55
DBF4	YDR052C	YDL114W	Q07530	308 aa		5.39	□□□□□ -1.55
DBF4	YDR052C	YLL007C	Q07799	665 aa		5.39	□□□□□ -1.55
DBF4	YDR052C	TRM8	Q12009	286 aa		5.39	□□□□□ -1.55
DBF4	YDR052C	RAD61	Q99359	647 aa		5.39	□□□□□ -1.55
DBF4	YDR052C	IPP1	P00817	287 aa	Known RBP	5.39	□□□□□ -1.55
DBF4	YDR052C	RPS17A	P02407	136 aa	Known RBP	5.39	□□□□□ -1.55
DBF4	YDR052C	RPS17B	P14127	136 aa	Known RBP	5.39	□□□□□ -1.55
DBF4	YDR052C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	5.39	□□□□□ -1.55	not detected
DBF4	YDR052C	CLN2	P20438	545 aa		5.39	□□□□□ -1.55
DBF4	YDR052C	COQ8	P27697	501 aa		5.39	□□□□□ -1.55
DBF4	YDR052C	SAC6	P32599	642 aa	Known RBP	5.39	□□□□□ -1.55
DBF4	YDR052C	TYE7	P33122	291 aa	Predicted RBP	5.39	□□□□□ -1.55
DBF4	YDR052C	BCK2	P33306	851 aa		5.39	□□□□□ -1.55
DBF4	YDR052C	CLG1	P35190	452 aa		5.39	□□□□□ -1.55
DBF4	YDR052C	SLM4	P38247	162 aa		5.39	□□□□□ -1.55
DBF4	YDR052C	CTM1	P38818	585 aa		5.39	□□□□□ -1.55
DBF4	YDR052C	UBP2	Q01476	1272 aa		5.39	□□□□□ -1.55
DBF4	YDR052C	HMO1	Q03973	246 aa	Known RBP	5.39	□□□□□ -1.55
DBF4	YDR052C	TAF11	Q04226	346 aa		5.39	□□□□□ -1.55
DBF4	YDR052C	PNP1	Q05788	311 aa		5.39	□□□□□ -1.55
DBF4	YDR052C	RGA2	Q06407	1009 aa		5.39	□□□□□ -1.55
DBF4	YDR052C	DTD1	Q07648	150 aa	Known RBP	5.39	□□□□□ -1.55
DBF4	YDR052C	DIS3	Q08162	1001 aa	Known RBP	5.39	□□□□□ -1.55

Retrieved 100 of 5,963 RNA–protein pairs in 11 ms