RNA–Protein interactions for RNA: YDR049W

VMS1, Transcript of Component of a Cdc48p-complex involved in protein quality control, yeastyeast

Gene VMS1, Length 1,899 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMS1YDR049W PRO2P54885 456 aaKnown RBP6.1□□□□□ -1.43
VMS1YDR049W ROD1Q02805 837 aa6.1□□□□□ -1.43
VMS1YDR049W TFC6Q06339 672 aa6.1□□□□□ -1.43
VMS1YDR049W GUP2Q08929 609 aa6.1□□□□□ -1.43
VMS1YDR049W NUR1Q12066 484 aa6.1□□□□□ -1.43
VMS1YDR049W TCB3Q03640 1545 aaKnown RBP6.09□□□□□ -1.43
VMS1YDR049W TY1B-DR4Q07793 1604 aa6.09□□□□□ -1.43
VMS1YDR049W YLR358CO13565 187 aa6.09□□□□□ -1.43
VMS1YDR049W PUT4P15380 627 aa6.09□□□□□ -1.43
VMS1YDR049W UBC1P21734 215 aaKnown RBP6.09□□□□□ -1.43
VMS1YDR049W YCK2P23292 546 aaKnown RBP6.09□□□□□ -1.43
VMS1YDR049W PHO84P25297 587 aaKnown RBP6.09□□□□□ -1.43
VMS1YDR049W NPP1P25353 742 aa6.09□□□□□ -1.43
VMS1YDR049W TDA3P38758 523 aa6.09□□□□□ -1.43
VMS1YDR049W SAP4P53036 818 aa6.09□□□□□ -1.43
VMS1YDR049W RRT6P53117 311 aaPredicted RBP6.09□□□□□ -1.43
VMS1YDR049W LSC1P53598 329 aaKnown RBP6.09□□□□□ -1.43
VMS1YDR049W GIM3P53900 129 aa6.09□□□□□ -1.43
VMS1YDR049W DAK1P54838 584 aaKnown RBP6.09□□□□□ -1.43
VMS1YDR049W HOS3Q02959 697 aaKnown RBP6.09□□□□□ -1.43
VMS1YDR049W GYL1Q04322 720 aa6.09□□□□□ -1.43
VMS1YDR049W MGR3Q04472 501 aa6.09□□□□□ -1.43
VMS1YDR049W AIM32Q04689 311 aa6.09□□□□□ -1.43
VMS1YDR049W RSC3Q06639 885 aa6.09□□□□□ -1.43
VMS1YDR049W DCS2Q12123 353 aa6.09□□□□□ -1.43
VMS1YDR049W ADF1Q2V2Q1 113 aa6.09□□□□□ -1.43
VMS1YDR049W GCN4P03069 281 aa6.09□□□□□ -1.44
VMS1YDR049W SUR1P33300 382 aa6.09□□□□□ -1.44
VMS1YDR049W SWD1P39706 426 aa6.09□□□□□ -1.44
VMS1YDR049W AIM10P39965 576 aaKnown RBP6.09□□□□□ -1.44
VMS1YDR049W PKP1P40530 394 aa6.09□□□□□ -1.44
VMS1YDR049W PXA1P41909 870 aa6.09□□□□□ -1.44
VMS1YDR049W BNA2P47125 453 aa6.09□□□□□ -1.44
VMS1YDR049W EFM5P53200 248 aaKnown RBP6.09□□□□□ -1.44
VMS1YDR049W ART5P53244 586 aaKnown RBP6.09□□□□□ -1.44
VMS1YDR049W SNF12P53628 566 aa6.09□□□□□ -1.44
VMS1YDR049W PEX13P80667 386 aa6.09□□□□□ -1.44
VMS1YDR049W TOF2Q02208 771 aa6.09□□□□□ -1.44
VMS1YDR049W YDR306CQ06640 478 aa6.09□□□□□ -1.44
VMS1YDR049W RTC5Q12108 567 aaKnown RBP6.09□□□□□ -1.44
VMS1YDR049W RME1P32338 300 aaKnown RBP6.08□□□□□ -1.44
VMS1YDR049W AAR2P32357 355 aaPredicted RBP6.08□□□□□ -1.44
VMS1YDR049W YUH1P35127 236 aa6.08□□□□□ -1.44
VMS1YDR049W PEX32P38292 413 aa6.08□□□□□ -1.44
VMS1YDR049W GYP8P43570 497 aa6.08□□□□□ -1.44
VMS1YDR049W OGG1P53397 376 aaPredicted RBP6.08□□□□□ -1.44
VMS1YDR049W INP2Q03824 705 aa6.08□□□□□ -1.44
VMS1YDR049W YPQ2Q06328 317 aa6.08□□□□□ -1.44
VMS1YDR049W HMI1Q12039 706 aa6.08□□□□□ -1.44
VMS1YDR049W TGL5Q12043 749 aa6.08□□□□□ -1.44
VMS1YDR049W PSY3Q12318 242 aa6.08□□□□□ -1.44
VMS1YDR049W APC2Q12440 853 aa6.08□□□□□ -1.44
VMS1YDR049W PCD1Q12524 340 aa6.08□□□□□ -1.44
VMS1YDR049W YOR019WQ99248 730 aa6.08□□□□□ -1.44
VMS1YDR049W HVG1P0CE11 249 aa6.07□□□□□ -1.44
VMS1YDR049W DPH5P32469 300 aaPredicted RBP6.07□□□□□ -1.44
VMS1YDR049W KRE6P32486 720 aa6.07□□□□□ -1.44
VMS1YDR049W GCS1P35197 352 aa6.07□□□□□ -1.44
VMS1YDR049W KDX1P36005 433 aa6.07□□□□□ -1.44
VMS1YDR049W YMR124WP39523 943 aaKnown RBP6.07□□□□□ -1.44
VMS1YDR049W SAW1P39735 261 aa6.07□□□□□ -1.44
VMS1YDR049W PUG1P40100 303 aa6.07□□□□□ -1.44
VMS1YDR049W ATF1P40353 525 aa6.07□□□□□ -1.44
VMS1YDR049W UTP18P40362 594 aaPredicted RBP6.07□□□□□ -1.44
VMS1YDR049W INA22P40576 216 aa6.07□□□□□ -1.44
VMS1YDR049W GUS1P46655 708 aaKnown RBP RIP-Chip data6.07□□□□□ -1.44not detected
VMS1YDR049W LYS4P49367 693 aaPredicted RBP6.07□□□□□ -1.44
VMS1YDR049W VID30P53076 958 aa6.07□□□□□ -1.44
VMS1YDR049W MDR1P53258 950 aa6.07□□□□□ -1.44
VMS1YDR049W ARP5P53946 755 aa6.07□□□□□ -1.44
VMS1YDR049W NOG1Q02892 647 aaKnown RBP6.07□□□□□ -1.44
VMS1YDR049W VBA4Q04602 768 aaKnown RBP6.07□□□□□ -1.44
VMS1YDR049W SPH1Q06160 661 aa6.07□□□□□ -1.44
VMS1YDR049W OMS1Q06668 471 aa6.07□□□□□ -1.44
VMS1YDR049W HFI1Q12060 488 aa6.07□□□□□ -1.44
VMS1YDR049W APM4Q99186 491 aa6.07□□□□□ -1.44
VMS1YDR049W APE1P14904 514 aa6.07□□□□□ -1.44
VMS1YDR049W PHO3P24031 467 aa6.07□□□□□ -1.44
VMS1YDR049W DBP2P24783 546 aaKnown RBP6.07□□□□□ -1.44
VMS1YDR049W RRP43P25359 394 aaPredicted RBP6.07□□□□□ -1.44
VMS1YDR049W ADP1P25371 1049 aa6.07□□□□□ -1.44
VMS1YDR049W DMC1P25453 334 aa6.07□□□□□ -1.44
VMS1YDR049W SAC6P32599 642 aaKnown RBP6.07□□□□□ -1.44
VMS1YDR049W CTF18P49956 741 aa6.07□□□□□ -1.44
VMS1YDR049W TEL2P53038 688 aa6.07□□□□□ -1.44
VMS1YDR049W YHM2Q04013 314 aa6.07□□□□□ -1.44
VMS1YDR049W ERB1Q04660 807 aaKnown RBP6.07□□□□□ -1.44
VMS1YDR049W GGA1Q06336 557 aa6.07□□□□□ -1.44
VMS1YDR049W UTP4Q06679 776 aaKnown RBP6.07□□□□□ -1.44
VMS1YDR049W SKI3P17883 1432 aaKnown RBP6.06□□□□□ -1.44
VMS1YDR049W TPK1P06244 397 aa6.06□□□□□ -1.44
VMS1YDR049W YJU2P28320 278 aaPredicted RBP6.06□□□□□ -1.44
VMS1YDR049W ASF2P32448 525 aaPredicted RBP6.06□□□□□ -1.44
VMS1YDR049W IFA38P38286 347 aa6.06□□□□□ -1.44
VMS1YDR049W RIM11P38615 370 aa6.06□□□□□ -1.44
VMS1YDR049W YEL025CP39991 1188 aa6.06□□□□□ -1.44
VMS1YDR049W QDR2P40474 542 aa6.06□□□□□ -1.44
VMS1YDR049W YIL092WP40497 633 aa6.06□□□□□ -1.44
VMS1YDR049W SPO22P40511 975 aa6.06□□□□□ -1.44
VMS1YDR049W THI6P41835 540 aa6.06□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 23.4 ms