RNA–Protein interactions for RNA: YDL112W

TRM3, Transcript of 2'-O-ribose methyltransferase, yeastyeast

Gene TRM3, Length 4,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM3YDL112W TKL1P23254 680 aaKnown RBP1.97□□□□□ -2.09
TRM3YDL112W OYE3P41816 400 aaPredicted RBP1.97□□□□□ -2.09
TRM3YDL112W YMR206WQ03695 313 aa1.97□□□□□ -2.09
TRM3YDL112W TMA64Q04600 565 aaKnown RBP1.97□□□□□ -2.09
TRM3YDL112W SSL1Q04673 461 aaPredicted RBP1.97□□□□□ -2.09
TRM3YDL112W MMR1Q06324 491 aa1.97□□□□□ -2.09
TRM3YDL112W ACM1Q08981 209 aa1.97□□□□□ -2.09
TRM3YDL112W RVB2Q12464 471 aaKnown RBP1.97□□□□□ -2.09
TRM3YDL112W NUC1P08466 329 aa1.97□□□□□ -2.09
TRM3YDL112W SWI6P09959 803 aa1.97□□□□□ -2.09
TRM3YDL112W YUR1P26725 428 aa1.97□□□□□ -2.09
TRM3YDL112W POT1P27796 417 aaKnown RBP RIP-Chip data1.97□□□□□ -2.09not detected
TRM3YDL112W YAP1801P38856 637 aa1.97□□□□□ -2.09
TRM3YDL112W LRS4Q04087 347 aaKnown RBP1.97□□□□□ -2.09
TRM3YDL112W MYO5Q04439 1219 aaKnown RBP1.97□□□□□ -2.09
TRM3YDL112W CRG1P38892 291 aaRIP-Chip data1.97□□□□□ -2.09not detected
TRM3YDL112W ALG2P43636 503 aa1.97□□□□□ -2.09
TRM3YDL112W CCT8P47079 568 aaKnown RBP1.97□□□□□ -2.09
TRM3YDL112W PSP2P50109 593 aaKnown RBP1.97□□□□□ -2.09
TRM3YDL112W HFM1P51979 1187 aa1.97□□□□□ -2.09
TRM3YDL112W FOL1P53848 824 aa1.97□□□□□ -2.09
TRM3YDL112W YNL034WP53963 612 aa1.97□□□□□ -2.09
TRM3YDL112W YNL018CP53976 612 aa1.97□□□□□ -2.09
TRM3YDL112W NTG2Q08214 380 aa1.97□□□□□ -2.09
TRM3YDL112W COQ1P18900 473 aa1.96□□□□□ -2.1
TRM3YDL112W CHS3P29465 1165 aa1.96□□□□□ -2.1
TRM3YDL112W VID27P40157 782 aa1.96□□□□□ -2.1
TRM3YDL112W YJR142WP47173 342 aa1.96□□□□□ -2.1
TRM3YDL112W YMR321CQ04898 105 aa1.96□□□□□ -2.1
TRM3YDL112W FAP7Q12055 197 aaPredicted RBP1.96□□□□□ -2.1
TRM3YDL112W REC104P33323 182 aa1.96□□□□□ -2.1
TRM3YDL112W VPS45P38932 577 aa1.96□□□□□ -2.1
TRM3YDL112W TAD1P53065 400 aa1.96□□□□□ -2.1
TRM3YDL112W SPO1P53541 631 aa1.96□□□□□ -2.1
TRM3YDL112W FPR4Q06205 392 aaPredicted RBP1.96□□□□□ -2.1
TRM3YDL112W GSY1P23337 708 aa1.96□□□□□ -2.1
TRM3YDL112W SSD1P24276 1250 aaKnown RBP RIP-Chip data1.96□□□□□ -2.1not detected
TRM3YDL112W GGA2P38817 585 aaKnown RBP1.96□□□□□ -2.1
TRM3YDL112W BUD16P39988 312 aa1.96□□□□□ -2.1
TRM3YDL112W ALD5P40047 520 aaKnown RBP1.96□□□□□ -2.1
TRM3YDL112W PFD1P46988 109 aa1.96□□□□□ -2.1
TRM3YDL112W LIF1P53150 421 aa1.96□□□□□ -2.1
TRM3YDL112W ART5P53244 586 aaKnown RBP1.96□□□□□ -2.1
TRM3YDL112W LSB1P53281 241 aa1.96□□□□□ -2.1
TRM3YDL112W KRS1P15180 591 aaKnown RBP1.95□□□□□ -2.1
TRM3YDL112W PRP19P32523 503 aaKnown RBP1.95□□□□□ -2.1
TRM3YDL112W AIM3P38266 947 aaKnown RBP1.95□□□□□ -2.1
TRM3YDL112W RPN10P38886 268 aaKnown RBP1.95□□□□□ -2.1
TRM3YDL112W YJL049WP47048 450 aa1.95□□□□□ -2.1
TRM3YDL112W MET13P53128 600 aa1.95□□□□□ -2.1
TRM3YDL112W MSC2Q03455 724 aa1.95□□□□□ -2.1
TRM3YDL112W SPN1Q06505 410 aaPredicted RBP1.95□□□□□ -2.1
TRM3YDL112W RAD50P12753 1312 aa1.95□□□□□ -2.1
TRM3YDL112W KIN82P25341 720 aa1.95□□□□□ -2.1
TRM3YDL112W VPS8P39702 1274 aa1.95□□□□□ -2.1
TRM3YDL112W GDH3P39708 457 aa1.95□□□□□ -2.1
TRM3YDL112W MMF1P40185 145 aaKnown RBP1.95□□□□□ -2.1
TRM3YDL112W AVT1P47082 602 aa1.95□□□□□ -2.1
TRM3YDL112W MDR1P53258 950 aa1.95□□□□□ -2.1
TRM3YDL112W NPL3Q01560 414 aaKnown RBP RIP-Chip data1.95□□□□□ -2.1not detected
TRM3YDL112W RPT6Q01939 405 aaKnown RBP1.95□□□□□ -2.1
TRM3YDL112W BUL2Q03758 920 aaKnown RBP1.95□□□□□ -2.1
TRM3YDL112W BRE4Q07660 1125 aa1.95□□□□□ -2.1
TRM3YDL112W SRP54P20424 541 aaKnown RBP1.95□□□□□ -2.1
TRM3YDL112W MEF1P25039 761 aa1.95□□□□□ -2.1
TRM3YDL112W SRO9P25567 434 aaKnown RBP1.95□□□□□ -2.1
TRM3YDL112W ANP1P32629 500 aa1.95□□□□□ -2.1
TRM3YDL112W SLX1P38324 304 aa1.95□□□□□ -2.1
TRM3YDL112W NPP2P39997 493 aa1.95□□□□□ -2.1
TRM3YDL112W AZR1P50080 613 aa1.95□□□□□ -2.1
TRM3YDL112W NPY1P53164 384 aa1.95□□□□□ -2.1
TRM3YDL112W RKM2Q03942 479 aa1.95□□□□□ -2.1
TRM3YDL112W TMA10Q06177 86 aa1.95□□□□□ -2.1
TRM3YDL112W MDM38Q08179 573 aa1.95□□□□□ -2.1
TRM3YDL112W DIF1O13577 133 aa1.95□□□□□ -2.1
TRM3YDL112W TPM1P17536 199 aaKnown RBP1.95□□□□□ -2.1
TRM3YDL112W PEX6P33760 1030 aa1.95□□□□□ -2.1
TRM3YDL112W SEG2P34250 1132 aa1.95□□□□□ -2.1
TRM3YDL112W ARL1P38116 183 aaKnown RBP1.95□□□□□ -2.1
TRM3YDL112W CCT3P39077 534 aaKnown RBP1.95□□□□□ -2.1
TRM3YDL112W TPM2P40414 161 aa1.95□□□□□ -2.1
TRM3YDL112W GYP8P43570 497 aa1.95□□□□□ -2.1
TRM3YDL112W MRPS35P53292 345 aa1.95□□□□□ -2.1
TRM3YDL112W MDM1Q01846 1127 aa1.95□□□□□ -2.1
TRM3YDL112W SLD5Q03406 294 aa1.95□□□□□ -2.1
TRM3YDL112W MRD1Q06106 887 aaKnown RBP1.95□□□□□ -2.1
TRM3YDL112W CDC9P04819 755 aa1.94□□□□□ -2.1
TRM3YDL112W MAK31P23059 88 aa1.94□□□□□ -2.1
TRM3YDL112W SPC42P36094 363 aa1.94□□□□□ -2.1
TRM3YDL112W PET10P36139 283 aa1.94□□□□□ -2.1
TRM3YDL112W TVP38P36164 337 aa1.94□□□□□ -2.1
TRM3YDL112W YHR020WP38708 688 aaKnown RBP1.94□□□□□ -2.1
TRM3YDL112W RIM4P38741 713 aa1.94□□□□□ -2.1
TRM3YDL112W SAK1P38990 1142 aa1.94□□□□□ -2.1
TRM3YDL112W VIP1Q06685 1146 aaKnown RBP1.94□□□□□ -2.1
TRM3YDL112W DSE3Q08729 430 aa1.94□□□□□ -2.1
TRM3YDL112W TAO3P40468 2376 aa1.94□□□□□ -2.1
TRM3YDL112W SAM2P19358 384 aaKnown RBP1.94□□□□□ -2.1
TRM3YDL112W UBC1P21734 215 aaKnown RBP1.94□□□□□ -2.1
TRM3YDL112W EMC1P25574 760 aa1.94□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms