RNA–Protein interactions for RNA: YBR149W

ARA1, Transcript of NADP+ dependent arabinose dehydrogenase, yeast

Gene ARA1, Length 1,035 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ARA1	YBR149W	CUE2	P36075	443 aa	Known RBP	4.91	□□□□□ -1.62
ARA1	YBR149W	BCD1	P38772	366 aa		4.91	□□□□□ -1.62
ARA1	YBR149W	FMO1	P38866	432 aa		4.91	□□□□□ -1.62
ARA1	YBR149W	YJR008W	P47085	338 aa		4.91	□□□□□ -1.62
ARA1	YBR149W	RNR4	P49723	345 aa	Known RBP	4.91	□□□□□ -1.62
ARA1	YBR149W	STB4	P50104	949 aa		4.91	□□□□□ -1.62
ARA1	YBR149W	SLD3	P53135	668 aa		4.91	□□□□□ -1.62
ARA1	YBR149W	ADY4	Q05955	493 aa		4.91	□□□□□ -1.62
ARA1	YBR149W	IRC13	Q08630	104 aa		4.91	□□□□□ -1.62
ARA1	YBR149W	TMA7	Q3E764	64 aa	Known RBP	4.91	□□□□□ -1.62
ARA1	YBR149W	ALG7	P07286	448 aa		4.9	□□□□□ -1.63
ARA1	YBR149W	PEX1	P24004	1043 aa		4.9	□□□□□ -1.63
ARA1	YBR149W	DUN1	P39009	513 aa		4.9	□□□□□ -1.63
ARA1	YBR149W	NUP60	P39705	539 aa		4.9	□□□□□ -1.63
ARA1	YBR149W	BUD8	P41698	603 aa		4.9	□□□□□ -1.63
ARA1	YBR149W	YJL163C	P46996	555 aa		4.9	□□□□□ -1.63
ARA1	YBR149W	BIT61	P47041	543 aa		4.9	□□□□□ -1.63
ARA1	YBR149W	UBC11	P52492	156 aa		4.9	□□□□□ -1.63
ARA1	YBR149W	RNT1	Q02555	471 aa		4.9	□□□□□ -1.63
ARA1	YBR149W	YMR206W	Q03695	313 aa		4.9	□□□□□ -1.63
ARA1	YBR149W	ECM38	Q05902	660 aa	Predicted RBP	4.9	□□□□□ -1.63
ARA1	YBR149W	YOL057W	Q08225	711 aa		4.9	□□□□□ -1.63
ARA1	YBR149W	KAR1	P11927	433 aa		4.89	□□□□□ -1.63
ARA1	YBR149W	HCA4	P20448	770 aa	Known RBP	4.89	□□□□□ -1.63
ARA1	YBR149W	MF(ALPHA)2	P32435	120 aa		4.89	□□□□□ -1.63
ARA1	YBR149W	HXT4	P32467	576 aa		4.89	□□□□□ -1.63
ARA1	YBR149W	SEC6	P32844	805 aa		4.89	□□□□□ -1.63
ARA1	YBR149W	CCT3	P39077	534 aa	Known RBP	4.89	□□□□□ -1.63
ARA1	YBR149W	EMP65	P40085	556 aa		4.89	□□□□□ -1.63
ARA1	YBR149W	PHM6	Q05637	104 aa		4.89	□□□□□ -1.63
ARA1	YBR149W	THI22	Q06490	572 aa		4.89	□□□□□ -1.63
ARA1	YBR149W	NGL1	Q08213	363 aa	Known RBP	4.89	□□□□□ -1.63
ARA1	YBR149W	MPD2	Q99316	277 aa		4.89	□□□□□ -1.63
ARA1	YBR149W	PPR1	P07272	904 aa	Predicted RBP	4.88	□□□□□ -1.63
ARA1	YBR149W	ERG20	P08524	352 aa	Known RBP	4.88	□□□□□ -1.63
ARA1	YBR149W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	4.88	□□□□□ -1.63	not detected
ARA1	YBR149W	ATG36	P46983	293 aa		4.88	□□□□□ -1.63
ARA1	YBR149W	VBA4	Q04602	768 aa	Known RBP	4.88	□□□□□ -1.63
ARA1	YBR149W	PEX15	Q08215	383 aa		4.88	□□□□□ -1.63
ARA1	YBR149W	DIA2	Q08496	732 aa	Predicted RBP	4.88	□□□□□ -1.63
ARA1	YBR149W	POM34	Q12445	299 aa		4.88	□□□□□ -1.63
ARA1	YBR149W	MVD1	P32377	396 aa	Known RBP	4.87	□□□□□ -1.63
ARA1	YBR149W	HIR1	P32479	840 aa		4.87	□□□□□ -1.63
ARA1	YBR149W	HIS7	P33734	552 aa	Known RBP	4.87	□□□□□ -1.63
ARA1	YBR149W	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
ARA1	YBR149W	PEA2	P40091	420 aa		4.87	□□□□□ -1.63
ARA1	YBR149W	PXA1	P41909	870 aa		4.87	□□□□□ -1.63
ARA1	YBR149W	TAF4	P50105	388 aa		4.87	□□□□□ -1.63
ARA1	YBR149W	IRC10	Q08118	586 aa		4.87	□□□□□ -1.63
ARA1	YBR149W	SLX4	Q12098	748 aa		4.87	□□□□□ -1.63
ARA1	YBR149W	SIR3	P06701	978 aa		4.86	□□□□□ -1.63
ARA1	YBR149W	DGR2	P32330	852 aa		4.86	□□□□□ -1.63
ARA1	YBR149W	BCS1	P32839	456 aa		4.86	□□□□□ -1.63
ARA1	YBR149W	PPS1	P38148	807 aa		4.86	□□□□□ -1.63
ARA1	YBR149W	FMP52	P40008	231 aa		4.86	□□□□□ -1.63
ARA1	YBR149W	IRC5	P43610	853 aa		4.86	□□□□□ -1.63
ARA1	YBR149W	PAN2	P53010	1115 aa	Predicted RBP	4.86	□□□□□ -1.63
ARA1	YBR149W	NSE5	Q03718	556 aa		4.86	□□□□□ -1.63
ARA1	YBR149W	KIN82	P25341	720 aa		4.85	□□□□□ -1.63
ARA1	YBR149W	FEN2	P25621	512 aa	Known RBP	4.85	□□□□□ -1.63
ARA1	YBR149W	PRE4	P30657	266 aa		4.85	□□□□□ -1.63
ARA1	YBR149W	SRP68	P38687	599 aa	Known RBP	4.85	□□□□□ -1.63
ARA1	YBR149W	SFB3	P38810	929 aa		4.85	□□□□□ -1.63
ARA1	YBR149W	EAF5	P39995	279 aa		4.85	□□□□□ -1.63
ARA1	YBR149W	YOR378W	Q08902	515 aa		4.85	□□□□□ -1.63
ARA1	YBR149W	CWC2	Q12046	339 aa	Predicted RBP	4.85	□□□□□ -1.63
ARA1	YBR149W	ACF2	Q12168	779 aa		4.85	□□□□□ -1.63
ARA1	YBR149W	RPS9B	P05755	195 aa	Known RBP	4.84	□□□□□ -1.63
ARA1	YBR149W	SST2	P11972	698 aa	Known RBP	4.84	□□□□□ -1.63
ARA1	YBR149W	PRP22	P24384	1145 aa	Known RBP	4.84	□□□□□ -1.63
ARA1	YBR149W	MTC7	P32633	139 aa		4.84	□□□□□ -1.63
ARA1	YBR149W	CDS1	P38221	457 aa		4.84	□□□□□ -1.63
ARA1	YBR149W	COS111	P38308	924 aa		4.84	□□□□□ -1.63
ARA1	YBR149W	REV7	P38927	245 aa		4.84	□□□□□ -1.63
ARA1	YBR149W	YIL077C	P40508	320 aa		4.84	□□□□□ -1.63
ARA1	YBR149W	ENP2	P48234	707 aa	Known RBP	4.84	□□□□□ -1.63
ARA1	YBR149W	PPN1	Q04119	674 aa		4.84	□□□□□ -1.63
ARA1	YBR149W	OMS1	Q06668	471 aa		4.84	□□□□□ -1.63
ARA1	YBR149W	ZRT2	Q12436	422 aa		4.84	□□□□□ -1.63
ARA1	YBR149W	YKL033W-A	Q86ZR7	236 aa		4.84	□□□□□ -1.63
ARA1	YBR149W	YEL076C-A	P0CX16	216 aa		4.83	□□□□□ -1.64
ARA1	YBR149W	YLR464W	P0CX17	216 aa		4.83	□□□□□ -1.64
ARA1	YBR149W	NIC96	P34077	839 aa		4.83	□□□□□ -1.64
ARA1	YBR149W	PHO11	P35842	467 aa		4.83	□□□□□ -1.64
ARA1	YBR149W	YHR033W	P38690	423 aa		4.83	□□□□□ -1.64
ARA1	YBR149W	PHO12	P38693	467 aa		4.83	□□□□□ -1.64
ARA1	YBR149W	YEL076C	P39971	216 aa		4.83	□□□□□ -1.64
ARA1	YBR149W	PRM2	P40534	656 aa		4.83	□□□□□ -1.64
ARA1	YBR149W	RFX1	P48743	811 aa		4.83	□□□□□ -1.64
ARA1	YBR149W	FHN1	P53279	174 aa		4.83	□□□□□ -1.64
ARA1	YBR149W	SPO1	P53541	631 aa		4.83	□□□□□ -1.64
ARA1	YBR149W	TIM44	Q01852	431 aa		4.83	□□□□□ -1.64
ARA1	YBR149W	MTD1	Q02046	320 aa	Known RBP	4.83	□□□□□ -1.64
ARA1	YBR149W	YFT2	Q06676	274 aa		4.83	□□□□□ -1.64
ARA1	YBR149W	MLH3	Q12083	715 aa		4.83	□□□□□ -1.64
ARA1	YBR149W	ATP4	P05626	244 aa		4.82	□□□□□ -1.64
ARA1	YBR149W	PRP28	P23394	588 aa		4.82	□□□□□ -1.64
ARA1	YBR149W	MTH1	P35198	433 aa		4.82	□□□□□ -1.64
ARA1	YBR149W	PIG2	P40187	538 aa		4.82	□□□□□ -1.64
ARA1	YBR149W	NOP2	P40991	618 aa	Known RBP	4.82	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms