RNA–Protein interactions for RNA: YAL043C

PTA1, Transcript of Subunit of holo-CPF, yeast

Gene PTA1, Length 2,358 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PTA1	YAL043C	INP52	P50942	1183 aa		4.26	□□□□□ -1.73
PTA1	YAL043C	VID30	P53076	958 aa		4.26	□□□□□ -1.73
PTA1	YAL043C	YGR111W	P53265	400 aa		4.26	□□□□□ -1.73
PTA1	YAL043C	YDR222W	Q04925	415 aa		4.26	□□□□□ -1.73
PTA1	YAL043C	ERF2	Q06551	359 aa		4.26	□□□□□ -1.73
PTA1	YAL043C	DBP10	Q12389	995 aa	Known RBP	4.26	□□□□□ -1.73
PTA1	YAL043C	EMP46	Q12396	444 aa		4.26	□□□□□ -1.73
PTA1	YAL043C	YDL206W	Q12424	762 aa		4.26	□□□□□ -1.73
PTA1	YAL043C	CDC24	P11433	854 aa	Predicted RBP	4.26	□□□□□ -1.73
PTA1	YAL043C	NPP1	P25353	742 aa		4.26	□□□□□ -1.73
PTA1	YAL043C	CAP1	P28495	268 aa	Known RBP	4.26	□□□□□ -1.73
PTA1	YAL043C	KIP1	P28742	1111 aa		4.26	□□□□□ -1.73
PTA1	YAL043C	YKL222C	P35995	705 aa		4.26	□□□□□ -1.73
PTA1	YAL043C	DUG2	P38149	878 aa		4.26	□□□□□ -1.73
PTA1	YAL043C	LAM1	P38851	1228 aa		4.26	□□□□□ -1.73
PTA1	YAL043C	UTP7	P40055	554 aa	Known RBP	4.26	□□□□□ -1.73
PTA1	YAL043C	YER156C	P40093	338 aa	Known RBP	4.26	□□□□□ -1.73
PTA1	YAL043C	RRN7	P40992	514 aa		4.26	□□□□□ -1.73
PTA1	YAL043C	VTC4	P47075	721 aa		4.26	□□□□□ -1.73
PTA1	YAL043C	YJL007C	P47080	104 aa		4.26	□□□□□ -1.73
PTA1	YAL043C	ILM1	P47155	203 aa		4.26	□□□□□ -1.73
PTA1	YAL043C	COS5	P47187	383 aa		4.26	□□□□□ -1.73
PTA1	YAL043C	BIO4	P53630	237 aa		4.26	□□□□□ -1.73
PTA1	YAL043C	COG6	P53959	839 aa		4.26	□□□□□ -1.73
PTA1	YAL043C	YNL040W	P53960	456 aa	Predicted RBP	4.26	□□□□□ -1.73
PTA1	YAL043C	BUD22	Q04347	519 aa	Known RBP	4.26	□□□□□ -1.73
PTA1	YAL043C	DON1	Q05610	365 aa		4.26	□□□□□ -1.73
PTA1	YAL043C	SHS1	Q07657	551 aa		4.26	□□□□□ -1.73
PTA1	YAL043C	RIO1	Q12196	484 aa	Known RBP	4.26	□□□□□ -1.73
PTA1	YAL043C	FIG2	P25653	1609 aa		4.25	□□□□□ -1.73
PTA1	YAL043C	GCR1	P07261	785 aa		4.25	□□□□□ -1.73
PTA1	YAL043C	GCD2	P12754	651 aa	Predicted RBP	4.25	□□□□□ -1.73
PTA1	YAL043C	MSM1	P22438	575 aa		4.25	□□□□□ -1.73
PTA1	YAL043C	PRP22	P24384	1145 aa	Known RBP	4.25	□□□□□ -1.73
PTA1	YAL043C	TPS2	P31688	896 aa	Known RBP	4.25	□□□□□ -1.73
PTA1	YAL043C	HXT3	P32466	567 aa	Known RBP	4.25	□□□□□ -1.73
PTA1	YAL043C	KDX1	P36005	433 aa		4.25	□□□□□ -1.73
PTA1	YAL043C	SMF2	P38778	549 aa		4.25	□□□□□ -1.73
PTA1	YAL043C	LIN1	P38852	340 aa	Predicted RBP	4.25	□□□□□ -1.73
PTA1	YAL043C	TMN3	P40071	706 aa		4.25	□□□□□ -1.73
PTA1	YAL043C	FET4	P40988	552 aa		4.25	□□□□□ -1.73
PTA1	YAL043C	SEC27	P41811	889 aa	Known RBP	4.25	□□□□□ -1.73
PTA1	YAL043C	YFL040W	P43562	540 aa		4.25	□□□□□ -1.73
PTA1	YAL043C	ROG3	P43602	733 aa		4.25	□□□□□ -1.73
PTA1	YAL043C	YNR021W	P53723	404 aa	Known RBP	4.25	□□□□□ -1.73
PTA1	YAL043C	SHE9	Q04172	456 aa		4.25	□□□□□ -1.73
PTA1	YAL043C	HEL2	Q05580	639 aa	Known RBP	4.25	□□□□□ -1.73
PTA1	YAL043C	YPR097W	Q06839	1073 aa		4.25	□□□□□ -1.73
PTA1	YAL043C	DIA2	Q08496	732 aa	Predicted RBP	4.25	□□□□□ -1.73
PTA1	YAL043C	ABP140	Q08641	628 aa	Known RBP	4.25	□□□□□ -1.73
PTA1	YAL043C	YLR053C	Q12026	108 aa		4.25	□□□□□ -1.73
PTA1	YAL043C	ZPS1	Q12512	249 aa		4.25	□□□□□ -1.73
PTA1	YAL043C	SSC1	P0CS90	654 aa	Known RBP	4.25	□□□□□ -1.73
PTA1	YAL043C	PCK1	P10963	549 aa		4.25	□□□□□ -1.73
PTA1	YAL043C	SEC14	P24280	304 aa	Known RBP	4.25	□□□□□ -1.73
PTA1	YAL043C	HEM3	P28789	327 aa		4.25	□□□□□ -1.73
PTA1	YAL043C	SWI3	P32591	825 aa		4.25	□□□□□ -1.73
PTA1	YAL043C	YME1	P32795	747 aa		4.25	□□□□□ -1.73
PTA1	YAL043C	UGA4	P32837	571 aa		4.25	□□□□□ -1.73
PTA1	YAL043C	ERT1	P38140	529 aa		4.25	□□□□□ -1.73
PTA1	YAL043C	APM2	P38700	605 aa		4.25	□□□□□ -1.73
PTA1	YAL043C	QNS1	P38795	714 aa	Known RBP	4.25	□□□□□ -1.73
PTA1	YAL043C	REV7	P38927	245 aa		4.25	□□□□□ -1.73
PTA1	YAL043C	YDR089W	P38966	869 aa		4.25	□□□□□ -1.73
PTA1	YAL043C	PNT1	P38969	423 aa		4.25	□□□□□ -1.73
PTA1	YAL043C	SPC72	P39723	622 aa		4.25	□□□□□ -1.73
PTA1	YAL043C	FIS1	P40515	155 aa		4.25	□□□□□ -1.73
PTA1	YAL043C	RGD2	P43556	714 aa		4.25	□□□□□ -1.73
PTA1	YAL043C	MCM6	P53091	1017 aa	Known RBP	4.25	□□□□□ -1.73
PTA1	YAL043C	HOP2	P53187	214 aa		4.25	□□□□□ -1.73
PTA1	YAL043C	UTP8	P53276	713 aa	Known RBP	4.25	□□□□□ -1.73
PTA1	YAL043C	ALD6	P54115	500 aa	Known RBP	4.25	□□□□□ -1.73
PTA1	YAL043C	SYH1	Q02875	849 aa	Known RBP	4.25	□□□□□ -1.73
PTA1	YAL043C	FUS2	Q05670	677 aa		4.25	□□□□□ -1.73
PTA1	YAL043C	YLR455W	Q06188	304 aa		4.25	□□□□□ -1.73
PTA1	YAL043C	PSR1	Q07800	427 aa		4.25	□□□□□ -1.73
PTA1	YAL043C	TAF10	Q12030	206 aa		4.25	□□□□□ -1.73
PTA1	YAL043C	VPS5	Q92331	675 aa		4.25	□□□□□ -1.73
PTA1	YAL043C	PGK1	P00560	416 aa	Known RBP	4.24	□□□□□ -1.73
PTA1	YAL043C	SNF1	P06782	633 aa	Known RBP	4.24	□□□□□ -1.73
PTA1	YAL043C	RNR1	P21524	888 aa	Known RBP	4.24	□□□□□ -1.73
PTA1	YAL043C	MRPL25	P23369	157 aa		4.24	□□□□□ -1.73
PTA1	YAL043C	SCJ1	P25303	377 aa		4.24	□□□□□ -1.73
PTA1	YAL043C	GFD2	P25370	566 aa	Known RBP	4.24	□□□□□ -1.73
PTA1	YAL043C	BUD14	P27637	709 aa		4.24	□□□□□ -1.73
PTA1	YAL043C	YSC83	P32792	385 aa		4.24	□□□□□ -1.73
PTA1	YAL043C	CSG2	P35206	410 aa		4.24	□□□□□ -1.73
PTA1	YAL043C	REG2	P38232	338 aa		4.24	□□□□□ -1.73
PTA1	YAL043C	VID24	P38263	362 aa		4.24	□□□□□ -1.73
PTA1	YAL043C	POP4	P38336	279 aa		4.24	□□□□□ -1.73
PTA1	YAL043C	TPS3	P38426	1054 aa	Known RBP	4.24	□□□□□ -1.73
PTA1	YAL043C	YJL206C	P39529	758 aa		4.24	□□□□□ -1.73
PTA1	YAL043C	SAW1	P39735	261 aa		4.24	□□□□□ -1.73
PTA1	YAL043C	PFK26	P40433	827 aa	Known RBP	4.24	□□□□□ -1.73
PTA1	YAL043C	NIT1	P40447	199 aa		4.24	□□□□□ -1.73
PTA1	YAL043C	SDS3	P40505	327 aa		4.24	□□□□□ -1.73
PTA1	YAL043C	YGR016W	P53209	190 aa		4.24	□□□□□ -1.73
PTA1	YAL043C	YGR125W	P53273	1036 aa		4.24	□□□□□ -1.73
PTA1	YAL043C	ESBP6	P53918	673 aa		4.24	□□□□□ -1.73
PTA1	YAL043C	YNL115C	P53925	644 aa		4.24	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 15 ms