RNA–Protein interactions for RNA: ENST00000560721.6

ZEB1-219, Transcript of zinc finger E-box binding homeobox 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ZEB1, Length 3,368 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-219ENST00000560721 ERFEQ4G0M1 354 aa6.61□□□□□ -1.35
ZEB1-219ENST00000560721 CCDC178Q5BJE1 867 aa6.61□□□□□ -1.35
ZEB1-219ENST00000560721 DSCC1Q9BVC3 393 aa6.61□□□□□ -1.35
ZEB1-219ENST00000560721 MKRN1Q9UHC7 482 aaKnown RBP6.61□□□□□ -1.35
ZEB1-219ENST00000560721 NBPF7P0C2Y1 421 aaPredicted RBP6.61□□□□□ -1.35
ZEB1-219ENST00000560721 SLC4A3P48751 1232 aa6.61□□□□□ -1.35
ZEB1-219ENST00000560721 TTC22Q5TAA0 569 aa6.61□□□□□ -1.35
ZEB1-219ENST00000560721 FAM83AQ86UY5 434 aa6.61□□□□□ -1.35
ZEB1-219ENST00000560721 DEFB129Q9H1M3 183 aa6.61□□□□□ -1.35
ZEB1-219ENST00000560721 SLC45A1Q9Y2W3 748 aa6.61□□□□□ -1.35
ZEB1-219ENST00000560721 CCDC9Q9Y3X0 531 aaKnown RBP6.61□□□□□ -1.35
ZEB1-219ENST00000560721 H0YIN7 160 aa6.61□□□□□ -1.35
ZEB1-219ENST00000560721 FRAT2O75474 233 aaPredicted RBP6.61□□□□□ -1.35
ZEB1-219ENST00000560721 SEC24BO95487 1268 aa6.61□□□□□ -1.35
ZEB1-219ENST00000560721 CDK11BP21127 795 aaKnown RBP6.61□□□□□ -1.35
ZEB1-219ENST00000560721 IGHMBP2P38935 993 aaKnown RBP6.61□□□□□ -1.35
ZEB1-219ENST00000560721 KRT24Q2M2I5 525 aa6.61□□□□□ -1.35
ZEB1-219ENST00000560721 HOOK2Q96ED9 719 aa6.61□□□□□ -1.35
ZEB1-219ENST00000560721 TBC1D32Q96NH3 1257 aa6.61□□□□□ -1.35
ZEB1-219ENST00000560721 PNMA2Q9UL42 364 aa6.61□□□□□ -1.35
ZEB1-219ENST00000560721 FKBP1BP68106 108 aa6.6□□□□□ -1.35
ZEB1-219ENST00000560721 PLEKHM2Q8IWE5 1019 aa6.6□□□□□ -1.35
ZEB1-219ENST00000560721 RBM42Q9BTD8 480 aaKnown RBP6.6□□□□□ -1.35
ZEB1-219ENST00000560721 PIM2Q9P1W9 311 aa6.6□□□□□ -1.35
ZEB1-219ENST00000560721 ENTPD3O75355 529 aa6.6□□□□□ -1.35
ZEB1-219ENST00000560721 PLCG2P16885 1265 aa6.6□□□□□ -1.35
ZEB1-219ENST00000560721 PPP2R5BQ15173 497 aa6.6□□□□□ -1.35
ZEB1-219ENST00000560721 EPHA10Q5JZY3 1008 aa6.6□□□□□ -1.35
ZEB1-219ENST00000560721 DDX46Q7L014 1031 aaKnown RBP6.6□□□□□ -1.35
ZEB1-219ENST00000560721 ECHDC1Q9NTX5 307 aa6.6□□□□□ -1.35
ZEB1-219ENST00000560721 HMG20BQ9P0W2 317 aa6.6□□□□□ -1.35
ZEB1-219ENST00000560721 ITGA6P23229 1130 aa6.6□□□□□ -1.35
ZEB1-219ENST00000560721 NBPF5PQ86XG9 351 aaPredicted RBP6.6□□□□□ -1.35
ZEB1-219ENST00000560721 TTLL6Q8N841 843 aa6.6□□□□□ -1.35
ZEB1-219ENST00000560721 UBE2Q2Q8WVN8 375 aa6.6□□□□□ -1.35
ZEB1-219ENST00000560721 ZDHHC15Q96MV8 337 aa6.6□□□□□ -1.35
ZEB1-219ENST00000560721 LRRFIP2Q9Y608 721 aaKnown RBP6.6□□□□□ -1.35
ZEB1-219ENST00000560721 ZSWIM8A7E2V4 1837 aa6.59□□□□□ -1.35
ZEB1-219ENST00000560721 RGS3P49796 1198 aa6.59□□□□□ -1.35
ZEB1-219ENST00000560721 ZNF804AQ7Z570 1209 aa6.59□□□□□ -1.35
ZEB1-219ENST00000560721 ACSBG1Q96GR2 724 aa6.59□□□□□ -1.35
ZEB1-219ENST00000560721 ZNF112Q9UJU3 913 aa6.59□□□□□ -1.35
ZEB1-219ENST00000560721 MGAMO43451 1857 aa6.59□□□□□ -1.35
ZEB1-219ENST00000560721 GPR75-ASB3A0A0A6YYF3 556 aa6.59□□□□□ -1.35
ZEB1-219ENST00000560721 EN1Q05925 392 aaPredicted RBP6.59□□□□□ -1.35
ZEB1-219ENST00000560721 CCDC57Q2TAC2 916 aa6.59□□□□□ -1.35
ZEB1-219ENST00000560721 FAM43AQ8N2R8 423 aa6.59□□□□□ -1.35
ZEB1-219ENST00000560721 GNL3LQ9NVN8 582 aaKnown RBP6.59□□□□□ -1.35
ZEB1-219ENST00000560721 C9orf78Q9NZ63 289 aaPredicted RBP6.59□□□□□ -1.35
ZEB1-219ENST00000560721 TRMT112Q9UI30 125 aaKnown RBP6.59□□□□□ -1.35
ZEB1-219ENST00000560721 BRPF3Q9ULD4 1205 aa6.59□□□□□ -1.35
ZEB1-219ENST00000560721 MYH4Q9Y623 1939 aa6.59□□□□□ -1.36
ZEB1-219ENST00000560721 APBB1O00213 710 aa6.58□□□□□ -1.36
ZEB1-219ENST00000560721 ZMYM1Q5SVZ6 1142 aa6.58□□□□□ -1.36
ZEB1-219ENST00000560721 TBC1D16Q8TBP0 767 aa6.58□□□□□ -1.36
ZEB1-219ENST00000560721 PANK1Q8TE04 598 aa6.58□□□□□ -1.36
ZEB1-219ENST00000560721 SAGE1Q9NXZ1 904 aa6.58□□□□□ -1.36
ZEB1-219ENST00000560721 TFCP2L1Q9NZI6 479 aa6.58□□□□□ -1.36
ZEB1-219ENST00000560721 COG6Q9Y2V7 657 aa6.58□□□□□ -1.36
ZEB1-219ENST00000560721 SLC26A4O43511 780 aa6.58□□□□□ -1.36
ZEB1-219ENST00000560721 BECN1Q14457 450 aa6.58□□□□□ -1.36
ZEB1-219ENST00000560721 KBTBD3Q8NAB2 608 aa6.58□□□□□ -1.36
ZEB1-219ENST00000560721 IFIT1P09914 478 aaKnown RBP6.58□□□□□ -1.36
ZEB1-219ENST00000560721 PDE1AP54750 535 aa6.58□□□□□ -1.36
ZEB1-219ENST00000560721 MIS18AQ9NYP9 233 aa6.58□□□□□ -1.36
ZEB1-219ENST00000560721 COL4A6Q14031 1691 aa6.57□□□□□ -1.36
ZEB1-219ENST00000560721 PNMA6EA0A0J9YXQ4 647 aa6.57□□□□□ -1.36
ZEB1-219ENST00000560721 ORC4O43929 436 aa6.57□□□□□ -1.36
ZEB1-219ENST00000560721 MMP10P09238 476 aa6.57□□□□□ -1.36
ZEB1-219ENST00000560721 TNIP1Q15025 636 aa6.57□□□□□ -1.36
ZEB1-219ENST00000560721 GPC2Q8N158 579 aa6.57□□□□□ -1.36
ZEB1-219ENST00000560721 TANGO6Q9C0B7 1094 aa6.57□□□□□ -1.36
ZEB1-219ENST00000560721 MYPNQ86TC9 1320 aa6.57□□□□□ -1.36
ZEB1-219ENST00000560721 SOX12O15370 315 aa6.57□□□□□ -1.36
ZEB1-219ENST00000560721 CHRNDQ07001 517 aa6.57□□□□□ -1.36
ZEB1-219ENST00000560721 LMBR1LQ6UX01 489 aa6.57□□□□□ -1.36
ZEB1-219ENST00000560721 USP50Q70EL3 339 aaPredicted RBP6.57□□□□□ -1.36
ZEB1-219ENST00000560721 CLASRPQ8N2M8 674 aaKnown RBP6.57□□□□□ -1.36
ZEB1-219ENST00000560721 SNX21Q969T3 373 aa6.57□□□□□ -1.36
ZEB1-219ENST00000560721 GREM2Q9H772 168 aa6.57□□□□□ -1.36
ZEB1-219ENST00000560721 PLXNB2O15031 1838 aa6.57□□□□□ -1.36
ZEB1-219ENST00000560721 DDIT3P35638 169 aa6.57□□□□□ -1.36
ZEB1-219ENST00000560721 G3BP1Q13283 466 aaKnown RBP eCLIP6.57□□□□□ -1.36
ZEB1-219ENST00000560721 DACT2Q5SW24 774 aa6.57□□□□□ -1.36
ZEB1-219ENST00000560721 ATP8A2Q9NTI2 1148 aa6.57□□□□□ -1.36
ZEB1-219ENST00000560721 GGA1Q9UJY5 639 aa6.57□□□□□ -1.36
ZEB1-219ENST00000560721 SIP14410 1827 aa6.56□□□□□ -1.36
ZEB1-219ENST00000560721 FSD2A1L4K1 749 aa6.56□□□□□ -1.36
ZEB1-219ENST00000560721 LDHCP07864 332 aa6.56□□□□□ -1.36
ZEB1-219ENST00000560721 DALRD3Q5D0E6 543 aaKnown RBP6.56□□□□□ -1.36
ZEB1-219ENST00000560721 LBX2Q6XYB7 198 aa6.56□□□□□ -1.36
ZEB1-219ENST00000560721 ITPRIPQ8IWB1 547 aa6.56□□□□□ -1.36
ZEB1-219ENST00000560721 FAM84BQ96KN1 310 aaPredicted RBP6.56□□□□□ -1.36
ZEB1-219ENST00000560721 IGKV6D-41A0A0C4DH26 115 aa6.56□□□□□ -1.36
ZEB1-219ENST00000560721 TESPA1A2RU30 521 aaPredicted RBP6.56□□□□□ -1.36
ZEB1-219ENST00000560721 PTCD1O75127 700 aaKnown RBP6.56□□□□□ -1.36
ZEB1-219ENST00000560721 MX1P20591 662 aa6.56□□□□□ -1.36
ZEB1-219ENST00000560721 ADD2P35612 726 aa6.56□□□□□ -1.36
ZEB1-219ENST00000560721 CWF19L2Q2TBE0 894 aaKnown RBP6.56□□□□□ -1.36
ZEB1-219ENST00000560721 C2CD5Q86YS7 1000 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms