RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 LMTK2Q8IWU2 1503 aa6.4□□□□□ -1.39
VTI1B-203ENST00000554636 NEURL4Q96JN8 1562 aa6.4□□□□□ -1.39
VTI1B-203ENST00000554636 HFE2Q6ZVN8 426 aa6.39□□□□□ -1.39
VTI1B-203ENST00000554636 DHX32Q7L7V1 743 aaKnown RBP6.39□□□□□ -1.39
VTI1B-203ENST00000554636 FAM35AQ86V20 835 aa6.39□□□□□ -1.39
VTI1B-203ENST00000554636 COL26A1Q96A83 441 aa6.39□□□□□ -1.39
VTI1B-203ENST00000554636 RRP7BPQ9NSQ0 103 aa6.39□□□□□ -1.39
VTI1B-203ENST00000554636 ARHGAP31Q2M1Z3 1444 aa6.39□□□□□ -1.39
VTI1B-203ENST00000554636 LTBP4Q8N2S1 1624 aa6.39□□□□□ -1.39
VTI1B-203ENST00000554636 POLR1AO95602 1720 aaPredicted RBP6.39□□□□□ -1.39
VTI1B-203ENST00000554636 MSTNO14793 375 aa6.38□□□□□ -1.39
VTI1B-203ENST00000554636 PSAPL1Q6NUJ1 521 aa6.38□□□□□ -1.39
VTI1B-203ENST00000554636 SPOCK3Q9BQ16 436 aa6.38□□□□□ -1.39
VTI1B-203ENST00000554636 CFAP65Q6ZU64 1925 aaKnown RBP6.37□□□□□ -1.39
VTI1B-203ENST00000554636 UNC13BO14795 1591 aa6.37□□□□□ -1.39
VTI1B-203ENST00000554636 EFCAB6Q5THR3 1501 aa6.37□□□□□ -1.39
VTI1B-203ENST00000554636 ANKRD50Q9ULJ7 1429 aa6.37□□□□□ -1.39
VTI1B-203ENST00000554636 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.37□□□□□ -1.39
VTI1B-203ENST00000554636 TMEM88BA6NKF7 163 aa6.37□□□□□ -1.39
VTI1B-203ENST00000554636 ZBTB39O15060 712 aa6.37□□□□□ -1.39
VTI1B-203ENST00000554636 LILRB5O75023 590 aa6.37□□□□□ -1.39
VTI1B-203ENST00000554636 PPP1R15AO75807 674 aaPredicted RBP6.37□□□□□ -1.39
VTI1B-203ENST00000554636 ZAP70P43403 619 aa6.37□□□□□ -1.39
VTI1B-203ENST00000554636 CHRNA4P43681 627 aa6.37□□□□□ -1.39
VTI1B-203ENST00000554636 FAM50AQ14320 339 aaKnown RBP6.37□□□□□ -1.39
VTI1B-203ENST00000554636 TRIP4Q15650 581 aaPredicted RBP6.37□□□□□ -1.39
VTI1B-203ENST00000554636 GPR152Q8TDT2 470 aa6.37□□□□□ -1.39
VTI1B-203ENST00000554636 FBXO41Q8TF61 875 aa6.37□□□□□ -1.39
VTI1B-203ENST00000554636 NSUN5Q96P11 429 aaKnown RBP6.37□□□□□ -1.39
VTI1B-203ENST00000554636 STIM2Q9P246 746 aa6.37□□□□□ -1.39
VTI1B-203ENST00000554636 KCNMB2Q9Y691 235 aa6.37□□□□□ -1.39
VTI1B-203ENST00000554636 UBR1Q8IWV7 1749 aa6.36□□□□□ -1.39
VTI1B-203ENST00000554636 SYNMO15061 1565 aa6.36□□□□□ -1.39
VTI1B-203ENST00000554636 UGGT1Q9NYU2 1555 aa6.36□□□□□ -1.39
VTI1B-203ENST00000554636 RRBP1Q9P2E9 1410 aaKnown RBP6.36□□□□□ -1.39
VTI1B-203ENST00000554636 ROCK1Q13464 1354 aa6.36□□□□□ -1.39
VTI1B-203ENST00000554636 ZBTB42B2RXF5 422 aa6.36□□□□□ -1.39
VTI1B-203ENST00000554636 RGS9O75916 674 aaPredicted RBP6.36□□□□□ -1.39
VTI1B-203ENST00000554636 IGHA1P01876 353 aa6.36□□□□□ -1.39
VTI1B-203ENST00000554636 NID1P14543 1247 aa6.36□□□□□ -1.39
VTI1B-203ENST00000554636 EIF2AK2P19525 551 aaKnown RBP6.36□□□□□ -1.39
VTI1B-203ENST00000554636 MTMR3Q13615 1198 aa6.36□□□□□ -1.39
VTI1B-203ENST00000554636 COL9A3Q14050 684 aaPredicted RBP6.36□□□□□ -1.39
VTI1B-203ENST00000554636 TRAPPC3LQ5T215 181 aa6.36□□□□□ -1.39
VTI1B-203ENST00000554636 ELMSAN1Q6PJG2 1045 aa6.36□□□□□ -1.39
VTI1B-203ENST00000554636 C20orf204Q6ZNR8 217 aa6.36□□□□□ -1.39
VTI1B-203ENST00000554636 ATCAYQ86WG3 371 aa6.36□□□□□ -1.39
VTI1B-203ENST00000554636 EFCC1Q9HA90 598 aa6.36□□□□□ -1.39
VTI1B-203ENST00000554636 TIMELESSQ9UNS1 1208 aa6.36□□□□□ -1.39
VTI1B-203ENST00000554636 NOS1P29475 1434 aa6.35□□□□□ -1.39
VTI1B-203ENST00000554636 KANK1Q14678 1352 aa6.35□□□□□ -1.39
VTI1B-203ENST00000554636 C1QTNF9BB2RNN3 333 aa6.35□□□□□ -1.39
VTI1B-203ENST00000554636 UBAP1LF5GYI3 381 aa6.35□□□□□ -1.39
VTI1B-203ENST00000554636 J3QW42 95 aa6.35□□□□□ -1.39
VTI1B-203ENST00000554636 MAP3K6O95382 1288 aa6.35□□□□□ -1.39
VTI1B-203ENST00000554636 PROCP04070 461 aa6.35□□□□□ -1.39
VTI1B-203ENST00000554636 SPATA31C1P0DKV0 1188 aa6.35□□□□□ -1.39
VTI1B-203ENST00000554636 PLAURQ03405 335 aa6.35□□□□□ -1.39
VTI1B-203ENST00000554636 PRRT3Q5FWE3 981 aa6.35□□□□□ -1.39
VTI1B-203ENST00000554636 PERM1Q5SV97 790 aa6.35□□□□□ -1.39
VTI1B-203ENST00000554636 ALYREFQ86V81 257 aaKnown RBP6.35□□□□□ -1.39
VTI1B-203ENST00000554636 CD163Q86VB7 1156 aa6.35□□□□□ -1.39
VTI1B-203ENST00000554636 PIK3R5Q8WYR1 880 aa6.35□□□□□ -1.39
VTI1B-203ENST00000554636 TET3O43151 1660 aa6.35□□□□□ -1.39
VTI1B-203ENST00000554636 PIK3C2BO00750 1634 aa6.35□□□□□ -1.39
VTI1B-203ENST00000554636 MED14O60244 1454 aa6.34□□□□□ -1.39
VTI1B-203ENST00000554636 IQSEC2Q5JU85 1478 aa6.34□□□□□ -1.39
VTI1B-203ENST00000554636 ARHGAP23Q9P227 1491 aa6.34□□□□□ -1.39
VTI1B-203ENST00000554636 GCC2Q8IWJ2 1684 aa6.34□□□□□ -1.39
VTI1B-203ENST00000554636 SPDYE3A6NKU9 549 aa6.34□□□□□ -1.39
VTI1B-203ENST00000554636 MMP20O60882 483 aa6.34□□□□□ -1.39
VTI1B-203ENST00000554636 PSAPP07602 524 aa6.34□□□□□ -1.39
VTI1B-203ENST00000554636 ABTB2Q8N961 1025 aa6.34□□□□□ -1.39
VTI1B-203ENST00000554636 GTF3C2Q8WUA4 911 aaPredicted RBP6.34□□□□□ -1.39
VTI1B-203ENST00000554636 IQGAP3Q86VI3 1631 aa6.34□□□□□ -1.39
VTI1B-203ENST00000554636 SLIT1O75093 1534 aa6.34□□□□□ -1.39
VTI1B-203ENST00000554636 NPHP4O75161 1426 aaPredicted RBP6.33□□□□□ -1.4
VTI1B-203ENST00000554636 KDM5AP29375 1690 aaKnown RBP6.33□□□□□ -1.4
VTI1B-203ENST00000554636 IQGAP1P46940 1657 aa6.33□□□□□ -1.4
VTI1B-203ENST00000554636 ZNF335Q9H4Z2 1342 aaPredicted RBP6.33□□□□□ -1.4
VTI1B-203ENST00000554636 EGFRP00533 1210 aa6.33□□□□□ -1.4
VTI1B-203ENST00000554636 ARID4AP29374 1257 aaPredicted RBP6.33□□□□□ -1.4
VTI1B-203ENST00000554636 AFF1P51825 1210 aaKnown RBP6.33□□□□□ -1.4
VTI1B-203ENST00000554636 GPLD1P80108 840 aa6.33□□□□□ -1.4
VTI1B-203ENST00000554636 TRIM28Q13263 835 aaKnown RBP6.33□□□□□ -1.4
VTI1B-203ENST00000554636 GRIK4Q16099 956 aa6.33□□□□□ -1.4
VTI1B-203ENST00000554636 DMRTC2Q8IXT2 367 aaPredicted RBP6.33□□□□□ -1.4
VTI1B-203ENST00000554636 TRPM4Q8TD43 1214 aa6.33□□□□□ -1.4
VTI1B-203ENST00000554636 HELQQ8TDG4 1101 aa6.33□□□□□ -1.4
VTI1B-203ENST00000554636 LPIN3Q9BQK8 851 aa6.33□□□□□ -1.4
VTI1B-203ENST00000554636 SMG9Q9H0W8 520 aaKnown RBP6.33□□□□□ -1.4
VTI1B-203ENST00000554636 ANO2Q9NQ90 1003 aa6.33□□□□□ -1.4
VTI1B-203ENST00000554636 PRDM6Q9NQX0 595 aa6.33□□□□□ -1.4
VTI1B-203ENST00000554636 FAM13BQ9NYF5 915 aa6.33□□□□□ -1.4
VTI1B-203ENST00000554636 TLR7Q9NYK1 1049 aaKnown RBP6.33□□□□□ -1.4
VTI1B-203ENST00000554636 ADGRB3O60242 1522 aa6.33□□□□□ -1.4
VTI1B-203ENST00000554636 RPRD2Q5VT52 1461 aaKnown RBP6.33□□□□□ -1.4
VTI1B-203ENST00000554636 APBA3O96018 575 aa6.32□□□□□ -1.4
VTI1B-203ENST00000554636 ABL1P00519 1130 aa6.32□□□□□ -1.4
VTI1B-203ENST00000554636 MPSTP25325 297 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms