RNA–Protein interactions for RNA: ENST00000489719.1

ABCF3-217, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-217ENST00000489719 DLGAP5Q15398 846 aa22.25■■□□□ 1.15
ABCF3-217ENST00000489719 ZKSCAN2Q63HK3 967 aa22.25■■□□□ 1.15
ABCF3-217ENST00000489719 FBXO33Q7Z6M2 555 aa22.25■■□□□ 1.15
ABCF3-217ENST00000489719 CLUAP1Q96AJ1 413 aa22.25■■□□□ 1.15
ABCF3-217ENST00000489719 AIDAQ96BJ3 306 aa22.25■■□□□ 1.15
ABCF3-217ENST00000489719 HHIPL1Q96JK4 782 aa22.25■■□□□ 1.15
ABCF3-217ENST00000489719 GBA2Q9HCG7 927 aaPredicted RBP22.25■■□□□ 1.15
ABCF3-217ENST00000489719 FBXO3Q9UK99 471 aa22.25■■□□□ 1.15
ABCF3-217ENST00000489719 JAG2Q9Y219 1238 aa22.25■■□□□ 1.15
ABCF3-217ENST00000489719 F8W031 263 aaPredicted RBP22.24■■□□□ 1.15
ABCF3-217ENST00000489719 HUNKP57058 714 aa22.24■■□□□ 1.15
ABCF3-217ENST00000489719 CERS5Q8N5B7 392 aa22.24■■□□□ 1.15
ABCF3-217ENST00000489719 CDCA5Q96FF9 252 aa22.24■■□□□ 1.15
ABCF3-217ENST00000489719 MAP2K1Q02750 393 aaPredicted RBP22.23■■□□□ 1.15
ABCF3-217ENST00000489719 PUM3Q15397 648 aaKnown RBP22.23■■□□□ 1.15
ABCF3-217ENST00000489719 VGLL2Q8N8G2 317 aa22.23■■□□□ 1.15
ABCF3-217ENST00000489719 SIL1Q9H173 461 aa22.23■■□□□ 1.15
ABCF3-217ENST00000489719 CEP126Q9P2H0 1117 aa22.23■■□□□ 1.15
ABCF3-217ENST00000489719 FAM205AQ6ZU69 1335 aa22.23■■□□□ 1.15
ABCF3-217ENST00000489719 CIAO1O76071 339 aa22.21■■□□□ 1.15
ABCF3-217ENST00000489719 SLC5A1P13866 664 aa22.21■■□□□ 1.15
ABCF3-217ENST00000489719 MAP2K2P36507 400 aa22.21■■□□□ 1.15
ABCF3-217ENST00000489719 MFSD14BQ5SR56 506 aa22.21■■□□□ 1.15
ABCF3-217ENST00000489719 LPIN2Q92539 896 aa22.21■■□□□ 1.15
ABCF3-217ENST00000489719 WBP1LQ9NX94 342 aa22.21■■□□□ 1.15
ABCF3-217ENST00000489719 SCAF8Q9UPN6 1271 aaKnown RBP22.21■■□□□ 1.15
ABCF3-217ENST00000489719 TNNQ9UQP3 1299 aa22.21■■□□□ 1.15
ABCF3-217ENST00000489719 MYO1BO43795 1136 aa22.2■■□□□ 1.14
ABCF3-217ENST00000489719 GNAI2P04899 355 aa22.2■■□□□ 1.14
ABCF3-217ENST00000489719 IL15P40933 162 aaPredicted RBP22.2■■□□□ 1.14
ABCF3-217ENST00000489719 BCAMP50895 628 aa22.2■■□□□ 1.14
ABCF3-217ENST00000489719 RBM5P52756 815 aaKnown RBP eCLIP22.2■■□□□ 1.14
ABCF3-217ENST00000489719 ATG9AQ7Z3C6 839 aa22.2■■□□□ 1.14
ABCF3-217ENST00000489719 MTMR14Q8NCE2 650 aa22.2■■□□□ 1.14
ABCF3-217ENST00000489719 BEGAINQ9BUH8 593 aa22.2■■□□□ 1.14
ABCF3-217ENST00000489719 IQSEC3Q9UPP2 1182 aaPredicted RBP22.2■■□□□ 1.14
ABCF3-217ENST00000489719 FGFR2P21802 821 aa22.19■■□□□ 1.14
ABCF3-217ENST00000489719 CHAF1AQ13111 956 aaPredicted RBP22.19■■□□□ 1.14
ABCF3-217ENST00000489719 CFAP100Q494V2 611 aa22.19■■□□□ 1.14
ABCF3-217ENST00000489719 APOBEC3FQ8IUX4 373 aaKnown RBP22.19■■□□□ 1.14
ABCF3-217ENST00000489719 ZBED3Q96IU2 234 aaPredicted RBP22.19■■□□□ 1.14
ABCF3-217ENST00000489719 COPRSQ9NQ92 184 aa22.19■■□□□ 1.14
ABCF3-217ENST00000489719 SRGAP3O43295 1099 aa22.18■■□□□ 1.14
ABCF3-217ENST00000489719 AOC2O75106 756 aa22.18■■□□□ 1.14
ABCF3-217ENST00000489719 NF2P35240 595 aa22.18■■□□□ 1.14
ABCF3-217ENST00000489719 PRAMEF18Q5VWM3 479 aa22.18■■□□□ 1.14
ABCF3-217ENST00000489719 RGMBQ6NW40 437 aa22.18■■□□□ 1.14
ABCF3-217ENST00000489719 FTSJ3Q8IY81 847 aaKnown RBP22.18■■□□□ 1.14
ABCF3-217ENST00000489719 TMEM57Q8N5G2 664 aa22.18■■□□□ 1.14
ABCF3-217ENST00000489719 TBC1D22AQ8WUA7 517 aa22.18■■□□□ 1.14
ABCF3-217ENST00000489719 TTF2Q9UNY4 1162 aaKnown RBP22.18■■□□□ 1.14
ABCF3-217ENST00000489719 PA2G4Q9UQ80 394 aaKnown RBP22.18■■□□□ 1.14
ABCF3-217ENST00000489719 FOXN1O15353 648 aa22.17■■□□□ 1.14
ABCF3-217ENST00000489719 CTCFP49711 727 aaPredicted RBP22.17■■□□□ 1.14
ABCF3-217ENST00000489719 FKBP1BP68106 108 aa22.17■■□□□ 1.14
ABCF3-217ENST00000489719 CCDC102AQ96A19 550 aa22.17■■□□□ 1.14
ABCF3-217ENST00000489719 ZNF157P51786 506 aaPredicted RBP22.16■■□□□ 1.14
ABCF3-217ENST00000489719 COL13A1Q5TAT6 717 aaPredicted RBP22.16■■□□□ 1.14
ABCF3-217ENST00000489719 DZIP1LQ8IYY4 767 aaKnown RBP22.16■■□□□ 1.14
ABCF3-217ENST00000489719 PRMT6Q96LA8 375 aaPredicted RBP22.16■■□□□ 1.14
ABCF3-217ENST00000489719 SPDYE2BA6NHP3 402 aa22.15■■□□□ 1.14
ABCF3-217ENST00000489719 SPDYE6P0CI01 402 aa22.15■■□□□ 1.14
ABCF3-217ENST00000489719 NOGQ13253 232 aa22.15■■□□□ 1.14
ABCF3-217ENST00000489719 MTX1Q13505 466 aa22.15■■□□□ 1.14
ABCF3-217ENST00000489719 TTLL12Q14166 644 aaPredicted RBP22.15■■□□□ 1.14
ABCF3-217ENST00000489719 ATP2B3Q16720 1220 aa22.15■■□□□ 1.14
ABCF3-217ENST00000489719 GNL3LQ9NVN8 582 aaKnown RBP22.15■■□□□ 1.14
ABCF3-217ENST00000489719 TRPM7Q96QT4 1865 aa22.14■■□□□ 1.13
ABCF3-217ENST00000489719 DEFB129Q9H1M3 183 aa22.14■■□□□ 1.13
ABCF3-217ENST00000489719 SERPINA10Q9UK55 444 aa22.14■■□□□ 1.13
ABCF3-217ENST00000489719 PCDHAC2Q9Y5I4 1007 aa22.14■■□□□ 1.13
ABCF3-217ENST00000489719 PSME4Q14997 1843 aa22.14■■□□□ 1.13
ABCF3-217ENST00000489719 CLRN2A0PK11 232 aa22.13■■□□□ 1.13
ABCF3-217ENST00000489719 VEZTQ9HBM0 779 aa22.13■■□□□ 1.13
ABCF3-217ENST00000489719 PCNTO95613 3336 aa22.13■■□□□ 1.13
ABCF3-217ENST00000489719 UBE2Q2LH0YL09 131 aa22.12■■□□□ 1.13
ABCF3-217ENST00000489719 ITPRIPQ8IWB1 547 aa22.12■■□□□ 1.13
ABCF3-217ENST00000489719 AKAP2Q9Y2D5 859 aa22.12■■□□□ 1.13
ABCF3-217ENST00000489719 G3BP1Q13283 466 aaKnown RBP eCLIP22.11■■□□□ 1.13
ABCF3-217ENST00000489719 IFFO2Q5TF58 517 aa22.11■■□□□ 1.13
ABCF3-217ENST00000489719 ARMC9Q7Z3E5 817 aa22.11■■□□□ 1.13
ABCF3-217ENST00000489719 WDR66Q8TBY9 1149 aa22.11■■□□□ 1.13
ABCF3-217ENST00000489719 PRDM10Q9NQV6 1147 aa22.11■■□□□ 1.13
ABCF3-217ENST00000489719 SUGT1Q9Y2Z0 365 aa22.11■■□□□ 1.13
ABCF3-217ENST00000489719 CRKP46108 304 aa22.1■■□□□ 1.13
ABCF3-217ENST00000489719 LBX1P52954 281 aa22.1■■□□□ 1.13
ABCF3-217ENST00000489719 TIMM10P62072 90 aa22.1■■□□□ 1.13
ABCF3-217ENST00000489719 HDLBPQ00341 1268 aaKnown RBP22.1■■□□□ 1.13
ABCF3-217ENST00000489719 MOB2Q70IA6 237 aa22.1■■□□□ 1.13
ABCF3-217ENST00000489719 MRIQ9BWK5 157 aa22.1■■□□□ 1.13
ABCF3-217ENST00000489719 PPP2R3BQ9Y5P8 575 aa22.1■■□□□ 1.13
ABCF3-217ENST00000489719 POLR2AP24928 1970 aaKnown RBP22.1■■□□□ 1.13
ABCF3-217ENST00000489719 MS4A1P11836 297 aa22.09■■□□□ 1.13
ABCF3-217ENST00000489719 PRKG1Q13976 671 aa22.09■■□□□ 1.13
ABCF3-217ENST00000489719 GRIK5Q16478 980 aa22.09■■□□□ 1.13
ABCF3-217ENST00000489719 SUPT20HL1Q3ZLR7 823 aa22.09■■□□□ 1.13
ABCF3-217ENST00000489719 TEKT1Q969V4 418 aa22.09■■□□□ 1.13
ABCF3-217ENST00000489719 TDRD3Q9H7E2 651 aaKnown RBP22.09■■□□□ 1.13
ABCF3-217ENST00000489719 PNMA6EA0A0J9YXQ4 647 aa22.08■■□□□ 1.13
ABCF3-217ENST00000489719 FAM155AB1AL88 458 aaPredicted RBP22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 139.7 ms