RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 ZBED3Q96IU2 234 aaPredicted RBP19.86■□□□□ 0.77
CTDSP1-209ENST00000488627 GGA3Q9NZ52 723 aa19.86■□□□□ 0.77
CTDSP1-209ENST00000488627 CEP126Q9P2H0 1117 aa19.86■□□□□ 0.77
CTDSP1-209ENST00000488627 WNT10BO00744 389 aa19.85■□□□□ 0.77
CTDSP1-209ENST00000488627 IFIT1P09914 478 aaKnown RBP19.85■□□□□ 0.77
CTDSP1-209ENST00000488627 NBPF9Q3BBW0 867 aa19.85■□□□□ 0.77
CTDSP1-209ENST00000488627 DCPSQ96C86 337 aaKnown RBP19.85■□□□□ 0.77
CTDSP1-209ENST00000488627 PSME4Q14997 1843 aa19.85■□□□□ 0.77
CTDSP1-209ENST00000488627 CAVIN4Q5BKX8 364 aa19.84■□□□□ 0.77
CTDSP1-209ENST00000488627 ANGEL2Q5VTE6 544 aaKnown RBP19.84■□□□□ 0.77
CTDSP1-209ENST00000488627 MKRN1Q9UHC7 482 aaKnown RBP19.84■□□□□ 0.77
CTDSP1-209ENST00000488627 CNTNAP1P78357 1384 aa19.83■□□□□ 0.77
CTDSP1-209ENST00000488627 ZNF646O15015 1829 aaPredicted RBP19.83■□□□□ 0.77
CTDSP1-209ENST00000488627 RASSF10A6NK89 507 aa19.83■□□□□ 0.77
CTDSP1-209ENST00000488627 ADM5C9JUS6 153 aa19.83■□□□□ 0.77
CTDSP1-209ENST00000488627 CELF2O95319 508 aaKnown RBP19.83■□□□□ 0.77
CTDSP1-209ENST00000488627 SLC5A1P13866 664 aa19.83■□□□□ 0.77
CTDSP1-209ENST00000488627 ATP8B2P98198 1209 aa19.83■□□□□ 0.77
CTDSP1-209ENST00000488627 POLA2Q14181 598 aa19.83■□□□□ 0.77
CTDSP1-209ENST00000488627 VPS37DQ86XT2 251 aa19.83■□□□□ 0.77
CTDSP1-209ENST00000488627 IQSEC3Q9UPP2 1182 aaPredicted RBP19.83■□□□□ 0.77
CTDSP1-209ENST00000488627 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.83■□□□□ 0.77
CTDSP1-209ENST00000488627 ATP2B3Q16720 1220 aa19.82■□□□□ 0.76
CTDSP1-209ENST00000488627 MFSD14BQ5SR56 506 aa19.82■□□□□ 0.76
CTDSP1-209ENST00000488627 MTMR14Q8NCE2 650 aa19.82■□□□□ 0.76
CTDSP1-209ENST00000488627 SSH3Q8TE77 659 aa19.82■□□□□ 0.76
CTDSP1-209ENST00000488627 C1orf115Q9H7X2 142 aa19.82■□□□□ 0.76
CTDSP1-209ENST00000488627 HDAC9Q9UKV0 1011 aa19.82■□□□□ 0.76
CTDSP1-209ENST00000488627 PITPNM2Q9BZ72 1349 aa19.81■□□□□ 0.76
CTDSP1-209ENST00000488627 GRIK5Q16478 980 aa19.81■□□□□ 0.76
CTDSP1-209ENST00000488627 SULF1Q8IWU6 871 aa19.81■□□□□ 0.76
CTDSP1-209ENST00000488627 PCDHAC2Q9Y5I4 1007 aa19.81■□□□□ 0.76
CTDSP1-209ENST00000488627 TLL2Q9Y6L7 1015 aa19.81■□□□□ 0.76
CTDSP1-209ENST00000488627 F8W031 263 aaPredicted RBP19.8■□□□□ 0.76
CTDSP1-209ENST00000488627 MS4A1P11836 297 aa19.8■□□□□ 0.76
CTDSP1-209ENST00000488627 TFCP2Q12800 502 aa19.8■□□□□ 0.76
CTDSP1-209ENST00000488627 DEFB115Q30KQ5 88 aa19.8■□□□□ 0.76
CTDSP1-209ENST00000488627 ABT1Q9ULW3 272 aaKnown RBP19.8■□□□□ 0.76
CTDSP1-209ENST00000488627 VEGFBP49765 207 aa19.79■□□□□ 0.76
CTDSP1-209ENST00000488627 TIMM10P62072 90 aa19.79■□□□□ 0.76
CTDSP1-209ENST00000488627 SAPCD2Q86UD0 394 aa19.79■□□□□ 0.76
CTDSP1-209ENST00000488627 SCAF8Q9UPN6 1271 aaKnown RBP19.79■□□□□ 0.76
CTDSP1-209ENST00000488627 ZBTB22O15209 634 aa19.78■□□□□ 0.76
CTDSP1-209ENST00000488627 ADORA1P30542 326 aa19.78■□□□□ 0.76
CTDSP1-209ENST00000488627 CHAF1AQ13111 956 aaPredicted RBP19.78■□□□□ 0.76
CTDSP1-209ENST00000488627 MVPQ14764 893 aaKnown RBP19.78■□□□□ 0.76
CTDSP1-209ENST00000488627 DLGAP5Q15398 846 aa19.78■□□□□ 0.76
CTDSP1-209ENST00000488627 CFAP100Q494V2 611 aa19.78■□□□□ 0.76
CTDSP1-209ENST00000488627 PRMT6Q96LA8 375 aaPredicted RBP19.78■□□□□ 0.76
CTDSP1-209ENST00000488627 ZNF408Q9H9D4 720 aa19.78■□□□□ 0.76
CTDSP1-209ENST00000488627 AOX1Q06278 1338 aa19.77■□□□□ 0.76
CTDSP1-209ENST00000488627 SPDYE2BA6NHP3 402 aa19.77■□□□□ 0.76
CTDSP1-209ENST00000488627 FRAT2O75474 233 aaPredicted RBP19.77■□□□□ 0.76
CTDSP1-209ENST00000488627 SPDYE6P0CI01 402 aa19.77■□□□□ 0.76
CTDSP1-209ENST00000488627 PHKA1P46020 1223 aa19.77■□□□□ 0.76
CTDSP1-209ENST00000488627 C20orf194Q5TEA3 1177 aa19.77■□□□□ 0.76
CTDSP1-209ENST00000488627 CEP85Q6P2H3 762 aa19.77■□□□□ 0.76
CTDSP1-209ENST00000488627 TTF2Q9UNY4 1162 aaKnown RBP19.77■□□□□ 0.76
CTDSP1-209ENST00000488627 COG6Q9Y2V7 657 aa19.77■□□□□ 0.76
CTDSP1-209ENST00000488627 A0A1B0GUL7 405 aa19.76■□□□□ 0.75
CTDSP1-209ENST00000488627 G3BP1Q13283 466 aaKnown RBP eCLIP19.76■□□□□ 0.75
CTDSP1-209ENST00000488627 TBC1D22AQ8WUA7 517 aa19.76■□□□□ 0.75
CTDSP1-209ENST00000488627 CDCA5Q96FF9 252 aa19.76■□□□□ 0.75
CTDSP1-209ENST00000488627 ZBTB40Q9NUA8 1239 aa19.76■□□□□ 0.75
CTDSP1-209ENST00000488627 AKAP2Q9Y2D5 859 aa19.76■□□□□ 0.75
CTDSP1-209ENST00000488627 NOP58Q9Y2X3 529 aaKnown RBP19.76■□□□□ 0.75
CTDSP1-209ENST00000488627 PDE3AQ14432 1141 aa19.75■□□□□ 0.75
CTDSP1-209ENST00000488627 PRAMEF18Q5VWM3 479 aa19.75■□□□□ 0.75
CTDSP1-209ENST00000488627 CCDC102BQ68D86 513 aa19.75■□□□□ 0.75
CTDSP1-209ENST00000488627 HHIPL1Q96JK4 782 aa19.75■□□□□ 0.75
CTDSP1-209ENST00000488627 GBA2Q9HCG7 927 aaPredicted RBP19.75■□□□□ 0.75
CTDSP1-209ENST00000488627 SERPINA10Q9UK55 444 aa19.75■□□□□ 0.75
CTDSP1-209ENST00000488627 PCNTO95613 3336 aa19.74■□□□□ 0.75
CTDSP1-209ENST00000488627 XAGE2Q96GT9 111 aa19.74■□□□□ 0.75
CTDSP1-209ENST00000488627 MRIQ9BWK5 157 aa19.74■□□□□ 0.75
CTDSP1-209ENST00000488627 DDX19BQ9UMR2 479 aa19.74■□□□□ 0.75
CTDSP1-209ENST00000488627 SUGT1Q9Y2Z0 365 aa19.74■□□□□ 0.75
CTDSP1-209ENST00000488627 WDR33Q9C0J8 1336 aaKnown RBP19.74■□□□□ 0.75
CTDSP1-209ENST00000488627 COL1A1P02452 1464 aaPredicted RBP19.73■□□□□ 0.75
CTDSP1-209ENST00000488627 SURF6O75683 361 aaKnown RBP19.73■□□□□ 0.75
CTDSP1-209ENST00000488627 CRKP46108 304 aa19.73■□□□□ 0.75
CTDSP1-209ENST00000488627 HDLBPQ00341 1268 aaKnown RBP19.73■□□□□ 0.75
CTDSP1-209ENST00000488627 CYP4F22Q6NT55 531 aa19.73■□□□□ 0.75
CTDSP1-209ENST00000488627 WDR66Q8TBY9 1149 aa19.73■□□□□ 0.75
CTDSP1-209ENST00000488627 GNL3LQ9NVN8 582 aaKnown RBP19.73■□□□□ 0.75
CTDSP1-209ENST00000488627 SEMA3EO15041 775 aa19.72■□□□□ 0.75
CTDSP1-209ENST00000488627 APOBEC3FQ8IUX4 373 aaKnown RBP19.72■□□□□ 0.75
CTDSP1-209ENST00000488627 C2orf69Q8N8R5 385 aa19.72■□□□□ 0.75
CTDSP1-209ENST00000488627 CAPNS2Q96L46 248 aa19.72■□□□□ 0.75
CTDSP1-209ENST00000488627 CLRN2A0PK11 232 aa19.71■□□□□ 0.75
CTDSP1-209ENST00000488627 RBM5P52756 815 aaKnown RBP eCLIP19.71■□□□□ 0.752e-6■■□□□ 13.1
CTDSP1-209ENST00000488627 HUNKP57058 714 aa19.71■□□□□ 0.75
CTDSP1-209ENST00000488627 RASGRF1Q13972 1273 aa19.71■□□□□ 0.75
CTDSP1-209ENST00000488627 SIRT2Q8IXJ6 389 aa19.71■□□□□ 0.75
CTDSP1-209ENST00000488627 YTHDC1Q96MU7 727 aaKnown RBP19.71■□□□□ 0.75
CTDSP1-209ENST00000488627 GPR108Q9NPR9 543 aa19.71■□□□□ 0.75
CTDSP1-209ENST00000488627 DENND2AQ9ULE3 1009 aa19.71■□□□□ 0.75
CTDSP1-209ENST00000488627 POLR2AP24928 1970 aaKnown RBP19.71■□□□□ 0.75
CTDSP1-209ENST00000488627 SPDYE2Q495Y8 402 aa19.7■□□□□ 0.74
CTDSP1-209ENST00000488627 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 199.7 ms