RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 RASSF4Q9H2L5 321 aa8.68□□□□□ -1.02
SFXN1-202ENST00000421887 SH2B1Q9NRF2 756 aaPredicted RBP8.68□□□□□ -1.02
SFXN1-202ENST00000421887 DISP3Q9P2K9 1392 aa8.68□□□□□ -1.02
SFXN1-202ENST00000421887 MAP3K4Q9Y6R4 1608 aa8.68□□□□□ -1.02
SFXN1-202ENST00000421887 FAM177BA6PVY3 158 aa8.67□□□□□ -1.02
SFXN1-202ENST00000421887 TM4SF5O14894 197 aa8.67□□□□□ -1.02
SFXN1-202ENST00000421887 SCNN1AP37088 669 aa8.67□□□□□ -1.02
SFXN1-202ENST00000421887 TRIP4Q15650 581 aaPredicted RBP8.67□□□□□ -1.02
SFXN1-202ENST00000421887 ADAMTSL4Q6UY14 1074 aa8.67□□□□□ -1.02
SFXN1-202ENST00000421887 FBXL6Q8N531 539 aa8.67□□□□□ -1.02
SFXN1-202ENST00000421887 OR13H1Q8NG92 308 aa8.67□□□□□ -1.02
SFXN1-202ENST00000421887 GIMAP7Q8NHV1 300 aa8.67□□□□□ -1.02
SFXN1-202ENST00000421887 KIAA0586Q9BVV6 1533 aa8.67□□□□□ -1.02
SFXN1-202ENST00000421887 SEC31BQ9NQW1 1179 aa8.67□□□□□ -1.02
SFXN1-202ENST00000421887 ATG3Q9NT62 314 aa8.67□□□□□ -1.02
SFXN1-202ENST00000421887 UBAP1LF5GYI3 381 aa8.66□□□□□ -1.02
SFXN1-202ENST00000421887 EPHA1P21709 976 aa8.66□□□□□ -1.02
SFXN1-202ENST00000421887 COX20Q5RI15 118 aa8.66□□□□□ -1.02
SFXN1-202ENST00000421887 KANK4Q5T7N3 995 aaPredicted RBP8.66□□□□□ -1.02
SFXN1-202ENST00000421887 ANKRD34AQ69YU3 496 aa8.66□□□□□ -1.02
SFXN1-202ENST00000421887 GLMNQ92990 594 aa8.66□□□□□ -1.02
SFXN1-202ENST00000421887 COL26A1Q96A83 441 aa8.66□□□□□ -1.02
SFXN1-202ENST00000421887 ASIC4Q96FT7 647 aa8.66□□□□□ -1.02
SFXN1-202ENST00000421887 LEMD3Q9Y2U8 911 aa8.66□□□□□ -1.02
SFXN1-202ENST00000421887 CARMIL2Q6F5E8 1435 aa8.65□□□□□ -1.02
SFXN1-202ENST00000421887 FAM196BA6NMK8 535 aa8.65□□□□□ -1.02
SFXN1-202ENST00000421887 GAS2O43903 313 aaKnown RBP8.65□□□□□ -1.02
SFXN1-202ENST00000421887 FDX2Q6P4F2 183 aa8.65□□□□□ -1.02
SFXN1-202ENST00000421887 TP53INP2Q8IXH6 220 aa8.65□□□□□ -1.02
SFXN1-202ENST00000421887 RXRBP28702 533 aa8.64□□□□□ -1.03
SFXN1-202ENST00000421887 VRTNQ9H8Y1 702 aa8.64□□□□□ -1.03
SFXN1-202ENST00000421887 CCDC39Q9UFE4 941 aa8.64□□□□□ -1.03
SFXN1-202ENST00000421887 KIF21BO75037 1637 aa8.64□□□□□ -1.03
SFXN1-202ENST00000421887 EPRSP07814 1512 aaKnown RBP8.64□□□□□ -1.03
SFXN1-202ENST00000421887 TNIKQ9UKE5 1360 aa8.63□□□□□ -1.03
SFXN1-202ENST00000421887 NLRP12P59046 1061 aa8.63□□□□□ -1.03
SFXN1-202ENST00000421887 TTC39BQ5VTQ0 682 aaPredicted RBP8.63□□□□□ -1.03
SFXN1-202ENST00000421887 ETFBKMTQ8IXQ9 262 aa8.63□□□□□ -1.03
SFXN1-202ENST00000421887 RUSC1Q9BVN2 902 aa8.63□□□□□ -1.03
SFXN1-202ENST00000421887 OSBPL1AQ9BXW6 950 aa8.63□□□□□ -1.03
SFXN1-202ENST00000421887 RNF208Q9H0X6 261 aa8.63□□□□□ -1.03
SFXN1-202ENST00000421887 HIF3AQ9Y2N7 669 aa8.63□□□□□ -1.03
SFXN1-202ENST00000421887 A6NJR5 290 aa8.62□□□□□ -1.03
SFXN1-202ENST00000421887 PTPRAP18433 802 aa8.62□□□□□ -1.03
SFXN1-202ENST00000421887 MAP4P27816 1152 aaKnown RBP8.62□□□□□ -1.03
SFXN1-202ENST00000421887 POU5F2Q8N7G0 328 aa8.62□□□□□ -1.03
SFXN1-202ENST00000421887 PBX4Q9BYU1 374 aa8.62□□□□□ -1.03
SFXN1-202ENST00000421887 F13BP05160 661 aa8.61□□□□□ -1.03
SFXN1-202ENST00000421887 FOSL1P15407 271 aa8.61□□□□□ -1.03
SFXN1-202ENST00000421887 BRD2P25440 801 aaKnown RBP8.61□□□□□ -1.03
SFXN1-202ENST00000421887 SGO2Q562F6 1265 aa8.61□□□□□ -1.03
SFXN1-202ENST00000421887 NCAPG2Q86XI2 1143 aa8.61□□□□□ -1.03
SFXN1-202ENST00000421887 PIK3R5Q8WYR1 880 aa8.61□□□□□ -1.03
SFXN1-202ENST00000421887 ARXQ96QS3 562 aa8.61□□□□□ -1.03
SFXN1-202ENST00000421887 PPP1R12CQ9BZL4 782 aa8.61□□□□□ -1.03
SFXN1-202ENST00000421887 UACAQ9BZF9 1416 aa8.61□□□□□ -1.03
SFXN1-202ENST00000421887 UHRF1BP1LA0JNW5 1464 aa8.6□□□□□ -1.03
SFXN1-202ENST00000421887 PTPRMP28827 1452 aa8.6□□□□□ -1.03
SFXN1-202ENST00000421887 LMOD1P29536 600 aaPredicted RBP8.6□□□□□ -1.03
SFXN1-202ENST00000421887 CABP4P57796 275 aa8.6□□□□□ -1.03
SFXN1-202ENST00000421887 FLIIQ13045 1269 aa8.6□□□□□ -1.03
SFXN1-202ENST00000421887 MSMPQ1L6U9 139 aa8.6□□□□□ -1.03
SFXN1-202ENST00000421887 TPRNQ4KMQ1 711 aa8.6□□□□□ -1.03
SFXN1-202ENST00000421887 SLC7A3Q8WY07 619 aa8.6□□□□□ -1.03
SFXN1-202ENST00000421887 FBXL18Q96ME1 805 aa8.6□□□□□ -1.03
SFXN1-202ENST00000421887 ZCCHC11Q5TAX3 1644 aaKnown RBP8.59□□□□□ -1.03
SFXN1-202ENST00000421887 FKBP5Q13451 457 aaPredicted RBP8.59□□□□□ -1.03
SFXN1-202ENST00000421887 CBLL1Q75N03 491 aa8.59□□□□□ -1.03
SFXN1-202ENST00000421887 POP1Q99575 1024 aaKnown RBP8.59□□□□□ -1.03
SFXN1-202ENST00000421887 PCF11O94913 1555 aaKnown RBP8.59□□□□□ -1.03
SFXN1-202ENST00000421887 H3BRJ5 948 aa8.58□□□□□ -1.04
SFXN1-202ENST00000421887 CYP2E1P05181 493 aaPredicted RBP8.58□□□□□ -1.04
SFXN1-202ENST00000421887 PIP4K2BP78356 416 aa8.58□□□□□ -1.04
SFXN1-202ENST00000421887 VSIG10LQ86VR7 867 aa8.58□□□□□ -1.04
SFXN1-202ENST00000421887 FAM200AQ8TCP9 573 aa8.58□□□□□ -1.04
SFXN1-202ENST00000421887 ZMYND15Q9H091 742 aa8.58□□□□□ -1.04
SFXN1-202ENST00000421887 SAP130Q9H0E3 1048 aa8.58□□□□□ -1.04
SFXN1-202ENST00000421887 FAM13BQ9NYF5 915 aa8.58□□□□□ -1.04
SFXN1-202ENST00000421887 FNDC3AQ9Y2H6 1198 aaKnown RBP8.58□□□□□ -1.04
SFXN1-202ENST00000421887 CFAP43Q8NDM7 1665 aa8.58□□□□□ -1.04
SFXN1-202ENST00000421887 KDM5BQ9UGL1 1544 aa8.58□□□□□ -1.04
SFXN1-202ENST00000421887 KIF4AO95239 1232 aa8.57□□□□□ -1.04
SFXN1-202ENST00000421887 NFKBIBQ15653 356 aa8.57□□□□□ -1.04
SFXN1-202ENST00000421887 C12orf50Q8NA57 414 aaPredicted RBP8.57□□□□□ -1.04
SFXN1-202ENST00000421887 PRIMPOLQ96LW4 560 aa8.57□□□□□ -1.04
SFXN1-202ENST00000421887 KRTAP4-2Q9BYR5 136 aa8.57□□□□□ -1.04
SFXN1-202ENST00000421887 ABI2Q9NYB9 513 aaPredicted RBP8.57□□□□□ -1.04
SFXN1-202ENST00000421887 CD109Q6YHK3 1445 aa8.56□□□□□ -1.04
SFXN1-202ENST00000421887 JUNBP17275 347 aaPredicted RBP8.56□□□□□ -1.04
SFXN1-202ENST00000421887 FAM26DQ5JW98 314 aa8.56□□□□□ -1.04
SFXN1-202ENST00000421887 SHISA5Q8N114 240 aa8.56□□□□□ -1.04
SFXN1-202ENST00000421887 CEP120Q8N960 986 aa8.56□□□□□ -1.04
SFXN1-202ENST00000421887 CALR3Q96L12 384 aaKnown RBP8.56□□□□□ -1.04
SFXN1-202ENST00000421887 ADAM19Q9H013 955 aa8.56□□□□□ -1.04
SFXN1-202ENST00000421887 OSGEPQ9NPF4 335 aa8.56□□□□□ -1.04
SFXN1-202ENST00000421887 WDR7Q9Y4E6 1490 aa8.56□□□□□ -1.04
SFXN1-202ENST00000421887 SPATA31D1Q6ZQQ2 1576 aa8.56□□□□□ -1.04
SFXN1-202ENST00000421887 ADAMTSL3P82987 1691 aa8.56□□□□□ -1.04
SFXN1-202ENST00000421887 ARID4BQ4LE39 1312 aaPredicted RBP8.55□□□□□ -1.04
SFXN1-202ENST00000421887 CYP26A1O43174 497 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms