RNA–Protein interactions for RNA: ENSMUST00000169486.8

Ebf3-204, Transcript of Transcription factor COE3, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Ebf3, Length 4,994 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-204ENSMUST00000169486 Prdm1Q60636 856 aa19.56■□□□□ 0.72
Ebf3-204ENSMUST00000169486 Spata24Q6P926 205 aa19.56■□□□□ 0.72
Ebf3-204ENSMUST00000169486 Dnajc10Q9DC23 793 aa19.56■□□□□ 0.72
Ebf3-204ENSMUST00000169486 Lrrc9Q8CDN9 1456 aa19.56■□□□□ 0.72
Ebf3-204ENSMUST00000169486 Cetn1P41209 172 aa19.56■□□□□ 0.72
Ebf3-204ENSMUST00000169486 Dact3Q0PHV7 610 aa19.56■□□□□ 0.72
Ebf3-204ENSMUST00000169486 Map7d1A2AJI0 846 aa19.56■□□□□ 0.72
Ebf3-204ENSMUST00000169486 Igsf3Q6ZQA6 1194 aa19.56■□□□□ 0.72
Ebf3-204ENSMUST00000169486 Pde3aQ9Z0X4 1141 aa19.56■□□□□ 0.72
Ebf3-204ENSMUST00000169486 Exoc3l2D3YUP5 789 aa19.55■□□□□ 0.72
Ebf3-204ENSMUST00000169486 Edc3Q8K2D3 508 aaKnown RBP19.55■□□□□ 0.72
Ebf3-204ENSMUST00000169486 Stk36Q69ZM6 1316 aa19.55■□□□□ 0.72
Ebf3-204ENSMUST00000169486 Dnajc25A2ALW5 357 aa19.55■□□□□ 0.72
Ebf3-204ENSMUST00000169486 Pram1Q6BCL1 675 aa19.55■□□□□ 0.72
Ebf3-204ENSMUST00000169486 Ccdc105Q9D4K7 499 aa19.55■□□□□ 0.72
Ebf3-204ENSMUST00000169486 GnaqP21279 359 aa19.55■□□□□ 0.72
Ebf3-204ENSMUST00000169486 Zmym3Q9JLM4 1370 aa19.55■□□□□ 0.72
Ebf3-204ENSMUST00000169486 Gm5624F6ZZG8 207 aa19.55■□□□□ 0.72
Ebf3-204ENSMUST00000169486 Zfp91Q62511 572 aa19.55■□□□□ 0.72
Ebf3-204ENSMUST00000169486 Ndufab1Q9CR21 156 aa19.55■□□□□ 0.72
Ebf3-204ENSMUST00000169486 Ncapd2Q8K2Z4 1392 aa19.55■□□□□ 0.72
Ebf3-204ENSMUST00000169486 Sugp2Q8CH09 1067 aa19.54■□□□□ 0.72
Ebf3-204ENSMUST00000169486 Polr2dQ9D7M8 142 aaKnown RBP19.54■□□□□ 0.72
Ebf3-204ENSMUST00000169486 Tcerg1lQ3B807 590 aa19.54■□□□□ 0.72
Ebf3-204ENSMUST00000169486 PdiltQ9DAN1 588 aa19.54■□□□□ 0.72
Ebf3-204ENSMUST00000169486 Ccdc6D3YZP9 469 aa19.54■□□□□ 0.72
Ebf3-204ENSMUST00000169486 Rasal2E9PW37 1286 aa19.54■□□□□ 0.72
Ebf3-204ENSMUST00000169486 Cep19Q9CQA8 163 aa19.54■□□□□ 0.72
Ebf3-204ENSMUST00000169486 Capn12Q9ER56 720 aa19.54■□□□□ 0.72
Ebf3-204ENSMUST00000169486 Ccdc114Q3UX62 658 aa19.54■□□□□ 0.72
Ebf3-204ENSMUST00000169486 Kdm1aQ6ZQ88 853 aa19.54■□□□□ 0.72
Ebf3-204ENSMUST00000169486 Slc39a6Q8C145 765 aa19.54■□□□□ 0.72
Ebf3-204ENSMUST00000169486 Tsnaxip1Q99P25 704 aa19.54■□□□□ 0.72
Ebf3-204ENSMUST00000169486 Snap23O09044 210 aa19.53■□□□□ 0.72
Ebf3-204ENSMUST00000169486 Csrnp2Q8BGQ2 534 aa19.53■□□□□ 0.72
Ebf3-204ENSMUST00000169486 Sec62Q8BU14 398 aaKnown RBP19.53■□□□□ 0.72
Ebf3-204ENSMUST00000169486 Uba5Q8VE47 403 aa19.53■□□□□ 0.72
Ebf3-204ENSMUST00000169486 Usp11Q99K46 921 aa19.53■□□□□ 0.72
Ebf3-204ENSMUST00000169486 Erich3F6QRE9 1637 aa19.53■□□□□ 0.72
Ebf3-204ENSMUST00000169486 Jade3Q6IE82 823 aa19.53■□□□□ 0.72
Ebf3-204ENSMUST00000169486 TnksQ6PFX9 1320 aa19.53■□□□□ 0.72
Ebf3-204ENSMUST00000169486 Mcm7Q61881 719 aaKnown RBP19.53■□□□□ 0.72
Ebf3-204ENSMUST00000169486 Kiaa1328Q6NZK5 612 aa19.53■□□□□ 0.72
Ebf3-204ENSMUST00000169486 Tekt3Q6X6Z7 490 aa19.53■□□□□ 0.72
Ebf3-204ENSMUST00000169486 Ncaph2Q8BSP2 607 aa19.53■□□□□ 0.72
Ebf3-204ENSMUST00000169486 Abcc6Q9R1S7 1498 aa19.53■□□□□ 0.72
Ebf3-204ENSMUST00000169486 Eef2P58252 858 aaKnown RBP19.53■□□□□ 0.72
Ebf3-204ENSMUST00000169486 Myl10Q62082 202 aa19.53■□□□□ 0.72
Ebf3-204ENSMUST00000169486 Ifit1Q64282 463 aa19.53■□□□□ 0.72
Ebf3-204ENSMUST00000169486 PpanQ91YU8 470 aaKnown RBP19.53■□□□□ 0.72
Ebf3-204ENSMUST00000169486 Wdr24Q8CFJ9 790 aa19.52■□□□□ 0.72
Ebf3-204ENSMUST00000169486 Paip2Q9D6V8 124 aa19.52■□□□□ 0.72
Ebf3-204ENSMUST00000169486 Tagap1P0CAX8 505 aa19.52■□□□□ 0.72
Ebf3-204ENSMUST00000169486 Peg3Q3URU2 1571 aa19.52■□□□□ 0.72
Ebf3-204ENSMUST00000169486 Fgfr1opQ66JX5 399 aa19.52■□□□□ 0.72
Ebf3-204ENSMUST00000169486 Zc3h12cQ5DTV4 884 aa19.52■□□□□ 0.71
Ebf3-204ENSMUST00000169486 Rassf2Q8BMS9 326 aa19.52■□□□□ 0.71
Ebf3-204ENSMUST00000169486 SncbQ91ZZ3 133 aa19.52■□□□□ 0.71
Ebf3-204ENSMUST00000169486 Adgrl2Q8JZZ7 1487 aa19.51■□□□□ 0.71
Ebf3-204ENSMUST00000169486 Prkab2Q6PAM0 271 aa19.51■□□□□ 0.71
Ebf3-204ENSMUST00000169486 Syce1Q9D495 329 aa19.51■□□□□ 0.71
Ebf3-204ENSMUST00000169486 Gucy1a3Q9ERL9 691 aa19.51■□□□□ 0.71
Ebf3-204ENSMUST00000169486 Lmtk2Q3TYD6 1471 aa19.51■□□□□ 0.71
Ebf3-204ENSMUST00000169486 Ankrd35E9Q9D8 996 aa19.51■□□□□ 0.71
Ebf3-204ENSMUST00000169486 Exoc5Q3TPX4 708 aa19.51■□□□□ 0.71
Ebf3-204ENSMUST00000169486 Rab3gap1Q80UJ7 981 aa19.51■□□□□ 0.71
Ebf3-204ENSMUST00000169486 Capn2O08529 700 aa19.51■□□□□ 0.71
Ebf3-204ENSMUST00000169486 Calm1P0DP26 149 aaKnown RBP19.51■□□□□ 0.71
Ebf3-204ENSMUST00000169486 Calm2P0DP27 149 aaKnown RBP19.51■□□□□ 0.71
Ebf3-204ENSMUST00000169486 Calm3P0DP28 149 aaKnown RBP19.51■□□□□ 0.71
Ebf3-204ENSMUST00000169486 Ms4a1P19437 291 aa19.51■□□□□ 0.71
Ebf3-204ENSMUST00000169486 PpardP35396 440 aa19.51■□□□□ 0.71
Ebf3-204ENSMUST00000169486 CtcfQ61164 736 aaKnown RBP19.51■□□□□ 0.71
Ebf3-204ENSMUST00000169486 Tex14Q7M6U3 1450 aa19.51■□□□□ 0.71
Ebf3-204ENSMUST00000169486 Palm3A2TJV2 734 aa19.51■□□□□ 0.71
Ebf3-204ENSMUST00000169486 Nbr1P97432 988 aa19.51■□□□□ 0.71
Ebf3-204ENSMUST00000169486 Ccnl1Q52KE7 532 aaKnown RBP19.51■□□□□ 0.71
Ebf3-204ENSMUST00000169486 Kif2bQ8C0N1 668 aa19.51■□□□□ 0.71
Ebf3-204ENSMUST00000169486 Prl7a2O54831 253 aa19.5■□□□□ 0.71
Ebf3-204ENSMUST00000169486 Actn3O88990 900 aaKnown RBP19.5■□□□□ 0.71
Ebf3-204ENSMUST00000169486 Letm1Q9Z2I0 738 aa19.5■□□□□ 0.71
Ebf3-204ENSMUST00000169486 Adcy10Q8C0T9 1614 aa19.5■□□□□ 0.71
Ebf3-204ENSMUST00000169486 Asxl2Q8BZ32 1370 aa19.5■□□□□ 0.71
Ebf3-204ENSMUST00000169486 Dnajc21E9Q8D0 531 aa19.5■□□□□ 0.71
Ebf3-204ENSMUST00000169486 SympkQ80X82 1284 aa19.5■□□□□ 0.71
Ebf3-204ENSMUST00000169486 Tpcn2Q8BWC0 731 aa19.5■□□□□ 0.71
Ebf3-204ENSMUST00000169486 Pde5aQ8CG03 865 aa19.5■□□□□ 0.71
Ebf3-204ENSMUST00000169486 Rab3il1Q8VDV3 383 aa19.5■□□□□ 0.71
Ebf3-204ENSMUST00000169486 Stx17Q9D0I4 301 aa19.5■□□□□ 0.71
Ebf3-204ENSMUST00000169486 1700006A11RikB9EHI3 544 aa19.5■□□□□ 0.71
Ebf3-204ENSMUST00000169486 Znf18Q810A1 556 aa19.5■□□□□ 0.71
Ebf3-204ENSMUST00000169486 Prl3d3A0A0M6L0J6 224 aa19.49■□□□□ 0.71
Ebf3-204ENSMUST00000169486 Rnf216P58283 853 aa19.49■□□□□ 0.71
Ebf3-204ENSMUST00000169486 Stmn4P63042 189 aa19.49■□□□□ 0.71
Ebf3-204ENSMUST00000169486 Me3Q8BMF3 604 aa19.49■□□□□ 0.71
Ebf3-204ENSMUST00000169486 HhatQ8BMT9 499 aa19.49■□□□□ 0.71
Ebf3-204ENSMUST00000169486 Armc9Q9D2I5 817 aa19.49■□□□□ 0.71
Ebf3-204ENSMUST00000169486 Arhgef40Q3UPH7 1517 aa19.49■□□□□ 0.71
Ebf3-204ENSMUST00000169486 Gm5934D3Z4U6 212 aa19.49■□□□□ 0.71
Ebf3-204ENSMUST00000169486 Kiaa1524Q8BWY9 907 aa19.49■□□□□ 0.71
Retrieved 100 of 22,080 RNA–protein pairs in 58.7 ms