Protein–RNA interactions for Protein: O88990

Actn3, Alpha-actinin-3, mousemouse

Known RBP Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Actn3O88990 Gm25239-201ENSMUST00000174915 86 ntBASIC41.15■■■■■ 4.18
Actn3O88990 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC38.09■■■■□ 3.69
Actn3O88990 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC37.62■■■■□ 3.61
Actn3O88990 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC37■■■■□ 3.51
Actn3O88990 Gm15042-201ENSMUST00000120212 883 ntBASIC35.9■■■■□ 3.34
Actn3O88990 Gm24109-201ENSMUST00000175489 103 ntBASIC35.66■■■■□ 3.3
Actn3O88990 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC35.58■■■■□ 3.29
Actn3O88990 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC35.37■■■■□ 3.25
Actn3O88990 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC35.29■■■■□ 3.24
Actn3O88990 Gm15045-201ENSMUST00000117359 883 ntBASIC35.02■■■■□ 3.2
Actn3O88990 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC34.94■■■■□ 3.18
Actn3O88990 Psd-208ENSMUST00000224556 2034 ntBASIC34.89■■■■□ 3.18
Actn3O88990 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
Actn3O88990 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC34.75■■■■□ 3.15
Actn3O88990 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC34.73■■■■□ 3.15
Actn3O88990 Gm23366-201ENSMUST00000175022 89 ntBASIC34.42■■■■□ 3.1
Actn3O88990 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC34.19■■■■□ 3.06
Actn3O88990 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC33.51■■■□□ 2.95
Actn3O88990 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC33.49■■■□□ 2.95
Actn3O88990 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC33.44■■■□□ 2.94
Actn3O88990 AC153911.1-202ENSMUST00000218534 1034 ntBASIC33.31■■■□□ 2.92
Actn3O88990 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
Actn3O88990 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC33.21■■■□□ 2.91
Actn3O88990 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC33.04■■■□□ 2.88
Actn3O88990 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
Actn3O88990 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC33.03■■■□□ 2.88
Actn3O88990 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC33.01■■■□□ 2.87
Actn3O88990 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
Actn3O88990 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC32.99■■■□□ 2.87
Actn3O88990 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC32.93■■■□□ 2.86
Actn3O88990 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
Actn3O88990 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
Actn3O88990 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
Actn3O88990 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC32.71■■■□□ 2.83
Actn3O88990 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
Actn3O88990 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
Actn3O88990 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
Actn3O88990 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
Actn3O88990 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
Actn3O88990 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC32.58■■■□□ 2.81
Actn3O88990 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
Actn3O88990 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC32.5■■■□□ 2.79
Actn3O88990 Gm25238-201ENSMUST00000174914 89 ntBASIC32.48■■■□□ 2.79
Actn3O88990 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC32.43■■■□□ 2.78
Actn3O88990 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
Actn3O88990 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC32.26■■■□□ 2.75
Actn3O88990 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
Actn3O88990 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC31.95■■■□□ 2.71
Actn3O88990 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC31.94■■■□□ 2.7
Actn3O88990 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
Actn3O88990 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC31.91■■■□□ 2.7
Actn3O88990 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Actn3O88990 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Actn3O88990 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
Actn3O88990 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
Actn3O88990 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC31.69■■■□□ 2.66
Actn3O88990 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31.67■■■□□ 2.66
Actn3O88990 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC31.63■■■□□ 2.65
Actn3O88990 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC31.6■■■□□ 2.65
Actn3O88990 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC31.59■■■□□ 2.65
Actn3O88990 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
Actn3O88990 Gm42596-201ENSMUST00000196305 1958 ntBASIC31.54■■■□□ 2.64
Actn3O88990 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC31.53■■■□□ 2.64
Actn3O88990 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC31.51■■■□□ 2.64
Actn3O88990 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC31.44■■■□□ 2.62
Actn3O88990 Gm27325-201ENSMUST00000175467 74 ntBASIC31.43■■■□□ 2.62
Actn3O88990 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Actn3O88990 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC31.36■■■□□ 2.61
Actn3O88990 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Actn3O88990 Gm25262-201ENSMUST00000174934 133 ntBASIC31.25■■■□□ 2.59
Actn3O88990 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC31.18■■■□□ 2.58
Actn3O88990 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Actn3O88990 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC31.12■■■□□ 2.57
Actn3O88990 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Actn3O88990 Gm10524-201ENSMUST00000181931 1893 ntBASIC31.01■■■□□ 2.55
Actn3O88990 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
Actn3O88990 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Actn3O88990 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC30.95■■■□□ 2.54
Actn3O88990 Rab21-202ENSMUST00000218831 843 ntBASIC30.94■■■□□ 2.54
Actn3O88990 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
Actn3O88990 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
Actn3O88990 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC30.88■■■□□ 2.53
Actn3O88990 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC30.87■■■□□ 2.53
Actn3O88990 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC30.83■■■□□ 2.53
Actn3O88990 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC30.74■■■□□ 2.51
Actn3O88990 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
Actn3O88990 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Actn3O88990 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC30.65■■■□□ 2.5
Actn3O88990 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Actn3O88990 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC30.56■■■□□ 2.48
Actn3O88990 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC30.51■■■□□ 2.48
Actn3O88990 Gm26115-201ENSMUST00000175605 87 ntBASIC30.51■■■□□ 2.47
Actn3O88990 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC30.51■■■□□ 2.47
Actn3O88990 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
Actn3O88990 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
Actn3O88990 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC30.48■■■□□ 2.47
Actn3O88990 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC30.44■■■□□ 2.46
Actn3O88990 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC30.42■■■□□ 2.46
Actn3O88990 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Actn3O88990 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC30.41■■■□□ 2.46
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms