RNA–Protein interactions for RNA: ENSMUST00000022328.13

Ldb3-202, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldb3, Length 2,468 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-202ENSMUST00000022328 Spty2d1Q68FG3 682 aa12.85□□□□□ -0.35
Ldb3-202ENSMUST00000022328 Nxf7Q80SZ6 620 aaKnown RBP12.85□□□□□ -0.35
Ldb3-202ENSMUST00000022328 Rab3gap1Q80UJ7 981 aa12.85□□□□□ -0.35
Ldb3-202ENSMUST00000022328 Ift57Q8BXG3 429 aa12.85□□□□□ -0.35
Ldb3-202ENSMUST00000022328 Pes1Q9EQ61 584 aaKnown RBP12.85□□□□□ -0.35
Ldb3-202ENSMUST00000022328 Ube3bQ9ES34 1070 aa12.85□□□□□ -0.35
Ldb3-202ENSMUST00000022328 Kndc1Q0KK55 1742 aa12.84□□□□□ -0.35
Ldb3-202ENSMUST00000022328 Gm29094F6Q785 221 aa12.84□□□□□ -0.35
Ldb3-202ENSMUST00000022328 Rgs9O54828 675 aa12.84□□□□□ -0.35
Ldb3-202ENSMUST00000022328 Nucb2P81117 420 aa12.84□□□□□ -0.35
Ldb3-202ENSMUST00000022328 Nxf2Q4ZGD8 691 aa12.84□□□□□ -0.35
Ldb3-202ENSMUST00000022328 CtifQ6PEE2 600 aaKnown RBP12.84□□□□□ -0.35
Ldb3-202ENSMUST00000022328 Gimap5Q8BWF2 308 aa12.84□□□□□ -0.35
Ldb3-202ENSMUST00000022328 Ttc27Q8CD92 847 aa12.84□□□□□ -0.35
Ldb3-202ENSMUST00000022328 Riok1Q922Q2 567 aa12.84□□□□□ -0.35
Ldb3-202ENSMUST00000022328 MthfsQ9D110 203 aa12.84□□□□□ -0.35
Ldb3-202ENSMUST00000022328 Utp3Q9JI13 469 aaKnown RBP12.84□□□□□ -0.35
Ldb3-202ENSMUST00000022328 Casz1Q9CWL2 1761 aa12.84□□□□□ -0.35
Ldb3-202ENSMUST00000022328 Col3a1P08121 1464 aa12.84□□□□□ -0.35
Ldb3-202ENSMUST00000022328 Trim34bJ3QNR8 485 aa12.84□□□□□ -0.35
Ldb3-202ENSMUST00000022328 Lnx1O70263 728 aa12.84□□□□□ -0.35
Ldb3-202ENSMUST00000022328 Usp25P57080 1055 aa12.84□□□□□ -0.35
Ldb3-202ENSMUST00000022328 Cct2P80314 535 aaKnown RBP12.84□□□□□ -0.35
Ldb3-202ENSMUST00000022328 Itga6Q61739 1091 aa12.84□□□□□ -0.35
Ldb3-202ENSMUST00000022328 Nlrp9aQ66X03 949 aa12.84□□□□□ -0.35
Ldb3-202ENSMUST00000022328 Snx13Q6PHS6 957 aa12.84□□□□□ -0.35
Ldb3-202ENSMUST00000022328 Fsd1Q7TPM6 496 aa12.84□□□□□ -0.35
Ldb3-202ENSMUST00000022328 ImmtQ8CAQ8 757 aaKnown RBP12.84□□□□□ -0.35
Ldb3-202ENSMUST00000022328 Fbxo3Q9DC63 480 aa12.84□□□□□ -0.35
Ldb3-202ENSMUST00000022328 Ybx3Q9JKB3 361 aaKnown RBP12.84□□□□□ -0.35
Ldb3-202ENSMUST00000022328 Nwd2Q6P5U7 1742 aa12.84□□□□□ -0.35
Ldb3-202ENSMUST00000022328 1700113H08RikE9Q9Q5 327 aa12.83□□□□□ -0.36
Ldb3-202ENSMUST00000022328 Edrf1Q6GQV7 1239 aa12.83□□□□□ -0.36
Ldb3-202ENSMUST00000022328 Mtmr3Q8K296 1196 aa12.83□□□□□ -0.36
Ldb3-202ENSMUST00000022328 Wdr19Q3UGF1 1341 aa12.83□□□□□ -0.36
Ldb3-202ENSMUST00000022328 Prr5lA2AVJ5 370 aa12.83□□□□□ -0.36
Ldb3-202ENSMUST00000022328 Bin2D3Z6Q9 489 aa12.83□□□□□ -0.36
Ldb3-202ENSMUST00000022328 Pde8bE9Q4S1 865 aa12.83□□□□□ -0.36
Ldb3-202ENSMUST00000022328 Trim30aP15533 496 aa12.83□□□□□ -0.36
Ldb3-202ENSMUST00000022328 Prl3d1P18121 224 aa12.83□□□□□ -0.36
Ldb3-202ENSMUST00000022328 Sept1P42209 366 aa12.83□□□□□ -0.36
Ldb3-202ENSMUST00000022328 Plbd2Q3TCN2 594 aa12.83□□□□□ -0.36
Ldb3-202ENSMUST00000022328 Slc38a10Q5I012 1090 aa12.83□□□□□ -0.36
Ldb3-202ENSMUST00000022328 Cyp7a1Q64505 503 aa12.83□□□□□ -0.36
Ldb3-202ENSMUST00000022328 Ercc6lQ8BHK9 1240 aa12.83□□□□□ -0.36
Ldb3-202ENSMUST00000022328 Adam1bQ8R534 806 aa12.83□□□□□ -0.36
Ldb3-202ENSMUST00000022328 Rapgef4Q9EQZ6 1011 aa12.83□□□□□ -0.36
Ldb3-202ENSMUST00000022328 Hand2Q61039 217 aa12.82□□□□□ -0.36
Ldb3-202ENSMUST00000022328 Ankrd23Q812A3 306 aa12.82□□□□□ -0.36
Ldb3-202ENSMUST00000022328 Sptlc3Q8BG54 563 aa12.82□□□□□ -0.36
Ldb3-202ENSMUST00000022328 Alx1Q8C8B0 326 aa12.82□□□□□ -0.36
Ldb3-202ENSMUST00000022328 TnmdQ9EP64 317 aa12.82□□□□□ -0.36
Ldb3-202ENSMUST00000022328 Lrp5Q91VN0 1614 aa12.82□□□□□ -0.36
Ldb3-202ENSMUST00000022328 Gm973E9Q295 1059 aa12.82□□□□□ -0.36
Ldb3-202ENSMUST00000022328 Ercc3P49135 783 aa12.82□□□□□ -0.36
Ldb3-202ENSMUST00000022328 Tyro3P55144 880 aa12.82□□□□□ -0.36
Ldb3-202ENSMUST00000022328 Plekhf1Q3TB82 279 aa12.82□□□□□ -0.36
Ldb3-202ENSMUST00000022328 ErmnQ5EBJ4 281 aa12.82□□□□□ -0.36
Ldb3-202ENSMUST00000022328 Usp28Q5I043 1051 aa12.82□□□□□ -0.36
Ldb3-202ENSMUST00000022328 Znf526Q8BI66 675 aa12.82□□□□□ -0.36
Ldb3-202ENSMUST00000022328 Gtpbp4Q99ME9 634 aaKnown RBP12.82□□□□□ -0.36
Ldb3-202ENSMUST00000022328 Myh1Q5SX40 1942 aa12.81□□□□□ -0.36
Ldb3-202ENSMUST00000022328 Zkscan7E9PVW1 718 aa12.81□□□□□ -0.36
Ldb3-202ENSMUST00000022328 Ifit1Q64282 463 aa12.81□□□□□ -0.36
Ldb3-202ENSMUST00000022328 Kiaa0754Q69ZZ9 979 aa12.81□□□□□ -0.36
Ldb3-202ENSMUST00000022328 Kcnf1Q7TSH7 493 aa12.81□□□□□ -0.36
Ldb3-202ENSMUST00000022328 Bicd2Q921C5 820 aa12.81□□□□□ -0.36
Ldb3-202ENSMUST00000022328 Setdb1O88974 1307 aa12.81□□□□□ -0.36
Ldb3-202ENSMUST00000022328 Ankrd31A0A140LI88 1765 aa12.81□□□□□ -0.36
Ldb3-202ENSMUST00000022328 Cfap58B2RW38 873 aa12.81□□□□□ -0.36
Ldb3-202ENSMUST00000022328 Tmem109Q3UBX0 243 aa12.81□□□□□ -0.36
Ldb3-202ENSMUST00000022328 Oxsr1Q6P9R2 527 aa12.81□□□□□ -0.36
Ldb3-202ENSMUST00000022328 Emilin1Q99K41 1017 aa12.81□□□□□ -0.36
Ldb3-202ENSMUST00000022328 Myh7Q91Z83 1935 aa12.81□□□□□ -0.36
Ldb3-202ENSMUST00000022328 Sall1Q9ER74 1322 aa12.8□□□□□ -0.36
Ldb3-202ENSMUST00000022328 Vmn2r23E9PXI5 849 aa12.8□□□□□ -0.36
Ldb3-202ENSMUST00000022328 Cyp2d9P11714 504 aa12.8□□□□□ -0.36
Ldb3-202ENSMUST00000022328 Cfap157Q0VFX2 523 aa12.8□□□□□ -0.36
Ldb3-202ENSMUST00000022328 Tmem59lQ7TNI2 337 aa12.8□□□□□ -0.36
Ldb3-202ENSMUST00000022328 Abtb2Q7TQI7 1024 aa12.8□□□□□ -0.36
Ldb3-202ENSMUST00000022328 Cep55Q8BT07 462 aa12.8□□□□□ -0.36
Ldb3-202ENSMUST00000022328 Plekho1Q9JIY0 408 aa12.8□□□□□ -0.36
Ldb3-202ENSMUST00000022328 Ccdc112A0AUP1 442 aa12.8□□□□□ -0.36
Ldb3-202ENSMUST00000022328 Prr29B1ARI9 187 aa12.8□□□□□ -0.36
Ldb3-202ENSMUST00000022328 Pcdhb9E9Q5G2 828 aa12.8□□□□□ -0.36
Ldb3-202ENSMUST00000022328 FosbP13346 338 aa12.8□□□□□ -0.36
Ldb3-202ENSMUST00000022328 Gpatch11Q3UFS4 262 aa12.8□□□□□ -0.36
Ldb3-202ENSMUST00000022328 Esco1Q69Z69 843 aa12.8□□□□□ -0.36
Ldb3-202ENSMUST00000022328 Alg3Q8K2A8 438 aa12.8□□□□□ -0.36
Ldb3-202ENSMUST00000022328 Mmel1Q9JLI3 765 aa12.8□□□□□ -0.36
Ldb3-202ENSMUST00000022328 Nfe2l3Q9WTM4 660 aa12.8□□□□□ -0.36
Ldb3-202ENSMUST00000022328 Mctp1E9PV86 951 aa12.79□□□□□ -0.36
Ldb3-202ENSMUST00000022328 UncxO08934 530 aa12.79□□□□□ -0.36
Ldb3-202ENSMUST00000022328 Tpm3P21107 285 aaKnown RBP12.79□□□□□ -0.36
Ldb3-202ENSMUST00000022328 Ccdc82Q6PG04 518 aa12.79□□□□□ -0.36
Ldb3-202ENSMUST00000022328 Nme8Q715T0 586 aa12.79□□□□□ -0.36
Ldb3-202ENSMUST00000022328 LyarQ08288 388 aaKnown RBP12.79□□□□□ -0.36
Ldb3-202ENSMUST00000022328 Cep63Q3UPP8 700 aa12.79□□□□□ -0.36
Ldb3-202ENSMUST00000022328 Pcdhb22Q91XZ8 794 aa12.79□□□□□ -0.36
Ldb3-202ENSMUST00000022328 Bcl2l12Q9D3J3 255 aa12.79□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 42.2 ms