RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 FHL5Q5TD97 284 aa14.87□□□□□ -0.03
PHRF1-201ENST00000264555 OR8B12Q8NGG6 310 aa14.87□□□□□ -0.03
PHRF1-201ENST00000264555 CT55Q8WUE5 264 aa14.87□□□□□ -0.03
PHRF1-201ENST00000264555 HEYLQ9NQ87 328 aaPredicted RBP14.87□□□□□ -0.03
PHRF1-201ENST00000264555 SIRT4Q9Y6E7 314 aaPredicted RBP14.87□□□□□ -0.03
PHRF1-201ENST00000264555 SCN3AQ9NY46 2000 aa14.86□□□□□ -0.03
PHRF1-201ENST00000264555 AQP7P3A6NL99 342 aa14.86□□□□□ -0.03
PHRF1-201ENST00000264555 MEOX1P50221 254 aa14.86□□□□□ -0.03
PHRF1-201ENST00000264555 FAM234AQ9H0X4 552 aa14.86□□□□□ -0.03
PHRF1-201ENST00000264555 PPP1R3CQ9UQK1 317 aa14.86□□□□□ -0.03
PHRF1-201ENST00000264555 PABPC1L2AQ5JQF8 200 aa14.86□□□□□ -0.03
PHRF1-201ENST00000264555 RELL2Q8NC24 303 aaPredicted RBP14.86□□□□□ -0.03
PHRF1-201ENST00000264555 EXTL1Q92935 676 aa14.86□□□□□ -0.03
PHRF1-201ENST00000264555 SUCNR1Q9BXA5 334 aa14.86□□□□□ -0.03
PHRF1-201ENST00000264555 EGLN1Q9GZT9 426 aa14.86□□□□□ -0.03
PHRF1-201ENST00000264555 IGHV3-64DA0A0J9YX35 117 aa14.86□□□□□ -0.03
PHRF1-201ENST00000264555 SHOXO15266 292 aa14.86□□□□□ -0.03
PHRF1-201ENST00000264555 OR11G2Q8NGC1 345 aa14.86□□□□□ -0.03
PHRF1-201ENST00000264555 TRAV17A0A0B4J275 112 aa14.86□□□□□ -0.03
PHRF1-201ENST00000264555 RAB4BP61018 213 aa14.86□□□□□ -0.03
PHRF1-201ENST00000264555 OR2A2Q6IF42 318 aa14.86□□□□□ -0.03
PHRF1-201ENST00000264555 ZPLD1Q8TCW7 415 aa14.86□□□□□ -0.03
PHRF1-201ENST00000264555 CTHRC1Q96CG8 243 aa14.86□□□□□ -0.03
PHRF1-201ENST00000264555 GNPNAT1Q96EK6 184 aaPredicted RBP14.86□□□□□ -0.03
PHRF1-201ENST00000264555 SMOC1Q9H4F8 434 aa14.86□□□□□ -0.03
PHRF1-201ENST00000264555 LIN7CQ9NUP9 197 aaKnown RBP14.86□□□□□ -0.03
PHRF1-201ENST00000264555 CST9LP1Q5W188 147 aa14.85□□□□□ -0.03
PHRF1-201ENST00000264555 NAA40Q86UY6 237 aa14.85□□□□□ -0.03
PHRF1-201ENST00000264555 OR2M3Q8NG83 312 aa14.85□□□□□ -0.03
PHRF1-201ENST00000264555 ZNF629Q9UEG4 869 aaPredicted RBP14.85□□□□□ -0.03
PHRF1-201ENST00000264555 GSK3AP49840 483 aa14.85□□□□□ -0.03
PHRF1-201ENST00000264555 GAB4Q2WGN9 574 aa14.85□□□□□ -0.03
PHRF1-201ENST00000264555 RNF133Q8WVZ7 376 aa14.85□□□□□ -0.03
PHRF1-201ENST00000264555 GPR87Q9BY21 358 aa14.85□□□□□ -0.03
PHRF1-201ENST00000264555 GNG3P63215 75 aa14.85□□□□□ -0.03
PHRF1-201ENST00000264555 DBPQ10586 325 aaPredicted RBP14.85□□□□□ -0.03
PHRF1-201ENST00000264555 CLLU1Q5K131 121 aa14.85□□□□□ -0.03
PHRF1-201ENST00000264555 ASB5Q8WWX0 329 aa14.85□□□□□ -0.03
PHRF1-201ENST00000264555 GMDSO60547 372 aa14.85□□□□□ -0.03
PHRF1-201ENST00000264555 H3F3CQ6NXT2 135 aa14.85□□□□□ -0.03
PHRF1-201ENST00000264555 GPX7Q96SL4 187 aaPredicted RBP14.85□□□□□ -0.03
PHRF1-201ENST00000264555 KCNE5Q9UJ90 142 aa14.85□□□□□ -0.03
PHRF1-201ENST00000264555 RPS10-NUDT3A0A1W2PQS6 291 aa14.85□□□□□ -0.03
PHRF1-201ENST00000264555 RPS10P46783 165 aaKnown RBP14.85□□□□□ -0.03
PHRF1-201ENST00000264555 AKR1C1Q04828 323 aa14.85□□□□□ -0.03
PHRF1-201ENST00000264555 SIGLEC14Q08ET2 396 aa14.85□□□□□ -0.03
PHRF1-201ENST00000264555 NIPSNAP3BQ9BS92 247 aa14.85□□□□□ -0.03
PHRF1-201ENST00000264555 KPTNQ9Y664 436 aa14.85□□□□□ -0.03
PHRF1-201ENST00000264555 TXNDC12O95881 172 aa14.84□□□□□ -0.03
PHRF1-201ENST00000264555 NFYBP25208 207 aa14.84□□□□□ -0.03
PHRF1-201ENST00000264555 HNF4GQ14541 408 aa14.84□□□□□ -0.03
PHRF1-201ENST00000264555 OR8G2PQ6IF36 304 aa14.84□□□□□ -0.03
PHRF1-201ENST00000264555 SLC26A10Q8NG04 563 aa14.84□□□□□ -0.03
PHRF1-201ENST00000264555 SFT2D1Q8WV19 159 aa14.84□□□□□ -0.03
PHRF1-201ENST00000264555 BOD1Q96IK1 185 aa14.84□□□□□ -0.03
PHRF1-201ENST00000264555 KCNIP2Q9NS61 270 aa14.84□□□□□ -0.03
PHRF1-201ENST00000264555 STRAPQ9Y3F4 350 aaKnown RBP14.84□□□□□ -0.03
PHRF1-201ENST00000264555 TO15178 435 aa14.84□□□□□ -0.03
PHRF1-201ENST00000264555 TSPAN2O60636 221 aa14.84□□□□□ -0.03
PHRF1-201ENST00000264555 DXOO77932 396 aaKnown RBP14.84□□□□□ -0.03
PHRF1-201ENST00000264555 CPN1P15169 458 aa14.84□□□□□ -0.03
PHRF1-201ENST00000264555 PPP1R1AQ13522 171 aa14.84□□□□□ -0.03
PHRF1-201ENST00000264555 Q7L0L9 218 aa14.84□□□□□ -0.03
PHRF1-201ENST00000264555 ZNF485Q8NCK3 441 aa14.84□□□□□ -0.03
PHRF1-201ENST00000264555 OR1J1Q8NGS3 322 aa14.84□□□□□ -0.03
PHRF1-201ENST00000264555 SMCO4Q9NRQ5 59 aa14.84□□□□□ -0.03
PHRF1-201ENST00000264555 ANK1P16157 1881 aa14.84□□□□□ -0.03
PHRF1-201ENST00000264555 TRAV8-7A0A075B6U6 113 aa14.84□□□□□ -0.03
PHRF1-201ENST00000264555 H2AFB1P0C5Y9 115 aa14.84□□□□□ -0.03
PHRF1-201ENST00000264555 TMEM182Q6ZP80 229 aaPredicted RBP14.84□□□□□ -0.03
PHRF1-201ENST00000264555 GFOD1Q9NXC2 390 aa14.84□□□□□ -0.03
PHRF1-201ENST00000264555 MMP16P51512 607 aa14.84□□□□□ -0.03
PHRF1-201ENST00000264555 ZP4Q12836 540 aa14.84□□□□□ -0.03
PHRF1-201ENST00000264555 B3GNTL1Q67FW5 361 aaPredicted RBP14.84□□□□□ -0.03
PHRF1-201ENST00000264555 PPP1R3EQ9H7J1 279 aa14.84□□□□□ -0.03
PHRF1-201ENST00000264555 RAB18Q9NP72 206 aa14.84□□□□□ -0.03
PHRF1-201ENST00000264555 A0A0U1RQK1 487 aa14.83□□□□□ -0.03
PHRF1-201ENST00000264555 SSSCA1O60232 199 aa14.83□□□□□ -0.03
PHRF1-201ENST00000264555 FABP6P51161 128 aa14.83□□□□□ -0.03
PHRF1-201ENST00000264555 Q8IYB0 196 aa14.83□□□□□ -0.03
PHRF1-201ENST00000264555 ADPRHL1Q8NDY3 354 aa14.83□□□□□ -0.03
PHRF1-201ENST00000264555 OR10AC1Q8NH08 325 aa14.83□□□□□ -0.03
PHRF1-201ENST00000264555 NANPQ8TBE9 248 aa14.83□□□□□ -0.03
PHRF1-201ENST00000264555 H1FXQ92522 213 aaKnown RBP14.83□□□□□ -0.03
PHRF1-201ENST00000264555 FRZBQ92765 325 aa14.83□□□□□ -0.03
PHRF1-201ENST00000264555 PARP12Q9H0J9 701 aaKnown RBP14.83□□□□□ -0.03
PHRF1-201ENST00000264555 ZNF230Q9UIE0 474 aaPredicted RBP14.83□□□□□ -0.03
PHRF1-201ENST00000264555 CASP8AP2Q9UKL3 1982 aa14.83□□□□□ -0.04
PHRF1-201ENST00000264555 SPATA46Q5T0L3 261 aa14.83□□□□□ -0.04
PHRF1-201ENST00000264555 KISS1RQ969F8 398 aaPredicted RBP14.83□□□□□ -0.04
PHRF1-201ENST00000264555 C9orf170A2RU37 121 aa14.83□□□□□ -0.04
PHRF1-201ENST00000264555 CCL3P10147 92 aa14.83□□□□□ -0.04
PHRF1-201ENST00000264555 ZNF92Q03936 586 aa14.83□□□□□ -0.04
PHRF1-201ENST00000264555 PMS2CLQ68D20 193 aa14.83□□□□□ -0.04
PHRF1-201ENST00000264555 SLC35G3Q8N808 338 aa14.83□□□□□ -0.04
PHRF1-201ENST00000264555 C10orf35Q96D05 121 aa14.83□□□□□ -0.04
PHRF1-201ENST00000264555 KCNK15Q9H427 330 aa14.83□□□□□ -0.04
PHRF1-201ENST00000264555 CYB5BO43169 146 aa14.83□□□□□ -0.04
PHRF1-201ENST00000264555 SFT2D2O95562 160 aa14.83□□□□□ -0.04
PHRF1-201ENST00000264555 SPEM2Q0P670 501 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms