RNA–Protein interactions for RNA: snR50

snR50, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR50, Length 90 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR50snR50 DMA2P53924 522 aa0.54□□□□□ -2.32
snR50snR50 APJ1P53940 528 aa0.54□□□□□ -2.32
snR50snR50 HMO1Q03973 246 aaKnown RBP0.54□□□□□ -2.32
snR50snR50 RSC3Q06639 885 aa0.54□□□□□ -2.32
snR50snR50 NRT1Q08485 598 aa0.54□□□□□ -2.32
snR50snR50 MDM20Q12387 796 aaKnown RBP0.54□□□□□ -2.32
snR50snR50 YMR230W-AQ3E7B5 62 aa0.54□□□□□ -2.32
snR50snR50 YMR084WA2P2R3 262 aa0.53□□□□□ -2.32
snR50snR50 YEL076C-AP0CX16 216 aa0.53□□□□□ -2.32
snR50snR50 YLR464WP0CX17 216 aa0.53□□□□□ -2.32
snR50snR50 SSA1P10591 642 aaKnown RBP0.53□□□□□ -2.32
snR50snR50 YAP1P19880 650 aaKnown RBP0.53□□□□□ -2.32
snR50snR50 AIM17P23180 465 aaKnown RBP0.53□□□□□ -2.32
snR50snR50 PEX1P24004 1043 aa0.53□□□□□ -2.32
snR50snR50 MRPL9P31334 269 aa0.53□□□□□ -2.32
snR50snR50 RPC34P32910 317 aa0.53□□□□□ -2.32
snR50snR50 REC104P33323 182 aa0.53□□□□□ -2.32
snR50snR50 APL3P38065 1025 aa0.53□□□□□ -2.32
snR50snR50 YRO2P38079 344 aa0.53□□□□□ -2.32
snR50snR50 RRT2P38332 387 aa0.53□□□□□ -2.32
snR50snR50 KSP1P38691 1029 aaKnown RBP0.53□□□□□ -2.32
snR50snR50 YHR112CP38716 378 aa0.53□□□□□ -2.32
snR50snR50 MTG2P38860 518 aa0.53□□□□□ -2.32
snR50snR50 FLO5P38894 1075 aa0.53□□□□□ -2.32
snR50snR50 MBP1P39678 833 aa0.53□□□□□ -2.32
snR50snR50 YEL076CP39971 216 aa0.53□□□□□ -2.32
snR50snR50 THI12P42883 340 aa0.53□□□□□ -2.32
snR50snR50 THI5P43534 340 aa0.53□□□□□ -2.32
snR50snR50 BST1P43571 1029 aa0.53□□□□□ -2.32
snR50snR50 THI11P47183 340 aa0.53□□□□□ -2.32
snR50snR50 LYS20P48570 428 aaKnown RBP0.53□□□□□ -2.32
snR50snR50 YBP2P53169 641 aa0.53□□□□□ -2.32
snR50snR50 ARG5,6Q01217 863 aa0.53□□□□□ -2.32
snR50snR50 NGL2Q03264 515 aaKnown RBP0.53□□□□□ -2.32
snR50snR50 YDR179W-AQ03983 463 aa0.53□□□□□ -2.32
snR50snR50 LCD1Q04377 747 aa0.53□□□□□ -2.32
snR50snR50 BSP1Q06604 576 aa0.53□□□□□ -2.32
snR50snR50 YDR306CQ06640 478 aa0.53□□□□□ -2.32
snR50snR50 VPS36Q06696 566 aa0.53□□□□□ -2.32
snR50snR50 YDL086WQ07505 273 aa0.53□□□□□ -2.32
snR50snR50 SNA4Q07549 140 aa0.53□□□□□ -2.32
snR50snR50 THI13Q07748 340 aa0.53□□□□□ -2.32
snR50snR50 HER1Q12276 1246 aa0.53□□□□□ -2.32
snR50snR50 CSR2Q12734 1121 aa0.53□□□□□ -2.32
snR50snR50 HRP1Q99383 534 aaKnown RBP0.53□□□□□ -2.32
snR50snR50 LAM4P38800 1345 aa0.53□□□□□ -2.32
snR50snR50 REV1P12689 985 aa0.52□□□□□ -2.33
snR50snR50 ADE2P21264 571 aaKnown RBP0.52□□□□□ -2.33
snR50snR50 URE2P23202 354 aaKnown RBP0.52□□□□□ -2.33
snR50snR50 GSY2P27472 705 aa0.52□□□□□ -2.33
snR50snR50 AAR2P32357 355 aaPredicted RBP0.52□□□□□ -2.33
snR50snR50 SEC6P32844 805 aa0.52□□□□□ -2.33
snR50snR50 MNR2P35724 969 aa0.52□□□□□ -2.33
snR50snR50 APT2P36973 181 aa0.52□□□□□ -2.33
snR50snR50 CTP1P38152 299 aa0.52□□□□□ -2.33
snR50snR50 BIT2P38346 545 aa0.52□□□□□ -2.33
snR50snR50 DHH1P39517 506 aaKnown RBP0.52□□□□□ -2.33
snR50snR50 PIG2P40187 538 aa0.52□□□□□ -2.33
snR50snR50 TOK1P40310 691 aa0.52□□□□□ -2.33
snR50snR50 YIL152WP40455 235 aa0.52□□□□□ -2.33
snR50snR50 YIL024CP40543 189 aa0.52□□□□□ -2.33
snR50snR50 TES1P41903 349 aaKnown RBP0.52□□□□□ -2.33
snR50snR50 PMT6P42934 759 aa0.52□□□□□ -2.33
snR50snR50 MDV1P47025 714 aa0.52□□□□□ -2.33
snR50snR50 YJR107WP47145 328 aa0.52□□□□□ -2.33
snR50snR50 MTR3P48240 250 aaPredicted RBP0.52□□□□□ -2.33
snR50snR50 PRP31P49704 494 aaPredicted RBP0.52□□□□□ -2.33
snR50snR50 IMP4P53941 290 aaKnown RBP0.52□□□□□ -2.33
snR50snR50 BOP3P53958 396 aa0.52□□□□□ -2.33
snR50snR50 RPL15BP54780 204 aaPredicted RBP0.52□□□□□ -2.33
snR50snR50 ADD37Q03233 198 aa0.52□□□□□ -2.33
snR50snR50 SHE9Q04172 456 aa0.52□□□□□ -2.33
snR50snR50 YSH1Q06224 779 aaPredicted RBP0.52□□□□□ -2.33
snR50snR50 RSA1Q08932 381 aa0.52□□□□□ -2.33
snR50snR50 RKI1Q12189 258 aa0.52□□□□□ -2.33
snR50snR50 YOR022CQ12204 715 aa0.52□□□□□ -2.33
snR50snR50 UBX3Q12229 455 aa0.52□□□□□ -2.33
snR50snR50 PRC1P00729 532 aa0.51□□□□□ -2.33
snR50snR50 RPL7AP05737 244 aaKnown RBP0.51□□□□□ -2.33
snR50snR50 RPS9BP05755 195 aaKnown RBP0.51□□□□□ -2.33
snR50snR50 ERG20P08524 352 aaKnown RBP0.51□□□□□ -2.33
snR50snR50 HEM1P09950 548 aaPredicted RBP0.51□□□□□ -2.33
snR50snR50 RAD18P10862 487 aa0.51□□□□□ -2.33
snR50snR50 TOP3P13099 656 aa0.51□□□□□ -2.33
snR50snR50 YCR043CP25361 127 aa0.51□□□□□ -2.33
snR50snR50 MGE1P38523 228 aa0.51□□□□□ -2.33
snR50snR50 SSF1P38789 453 aaPredicted RBP0.51□□□□□ -2.33
snR50snR50 SET5P38890 526 aaKnown RBP0.51□□□□□ -2.33
snR50snR50 GET2P40056 285 aa0.51□□□□□ -2.33
snR50snR50 VRG4P40107 337 aa0.51□□□□□ -2.33
snR50snR50 MKT1P40850 830 aaKnown RBP0.51□□□□□ -2.33
snR50snR50 ROK1P45818 564 aaPredicted RBP0.51□□□□□ -2.33
snR50snR50 NIT3P49954 291 aa0.51□□□□□ -2.33
snR50snR50 ZIP2P53061 704 aa0.51□□□□□ -2.33
snR50snR50 COP1P53622 1201 aaKnown RBP0.51□□□□□ -2.33
snR50snR50 SNF12P53628 566 aa0.51□□□□□ -2.33
snR50snR50 DAK1P54838 584 aaKnown RBP0.51□□□□□ -2.33
snR50snR50 REC102Q02721 264 aa0.51□□□□□ -2.33
snR50snR50 NAN1Q02931 896 aaKnown RBP0.51□□□□□ -2.33
snR50snR50 UFO1Q04511 668 aa0.51□□□□□ -2.33
Retrieved 100 of 5,963 RNA–protein pairs in 41.4 ms