RNA–Protein interactions for RNA: YPR175W

DPB2, Transcript of Second largest subunit of DNA polymerase II (DNA polymerase epsilon), yeastyeast

Gene DPB2, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DPB2YPR175W UPF3P48412 387 aaKnown RBP6.8□□□□□ -1.32
DPB2YPR175W RCM1P53972 490 aa6.8□□□□□ -1.32
DPB2YPR175W BLS1Q06071 122 aa6.8□□□□□ -1.32
DPB2YPR175W PUF3Q07807 879 aaKnown RBP RIP-Chip data6.8□□□□□ -1.32not detected
DPB2YPR175W ADP1P25371 1049 aa6.8□□□□□ -1.32
DPB2YPR175W PUG1P40100 303 aa6.8□□□□□ -1.32
DPB2YPR175W HOL1P53389 586 aa6.8□□□□□ -1.32
DPB2YPR175W SDH5Q08230 162 aa6.8□□□□□ -1.32
DPB2YPR175W HSF1P10961 833 aa6.79□□□□□ -1.32
DPB2YPR175W PTC7P38797 343 aa6.79□□□□□ -1.32
DPB2YPR175W PUS2P53167 370 aa6.79□□□□□ -1.32
DPB2YPR175W MED1Q12321 566 aa6.79□□□□□ -1.32
DPB2YPR175W ACO1P19414 778 aaKnown RBP RIP-Chip data6.78□□□□□ -1.32not detected
DPB2YPR175W YPT7P32939 208 aa6.78□□□□□ -1.32
DPB2YPR175W TGL1P34163 548 aa6.78□□□□□ -1.32
DPB2YPR175W RRN3P36070 627 aa6.78□□□□□ -1.32
DPB2YPR175W GTS1P40956 396 aa6.78□□□□□ -1.32
DPB2YPR175W SET2P46995 733 aaKnown RBP6.78□□□□□ -1.32
DPB2YPR175W MNT2P53059 558 aa6.78□□□□□ -1.32
DPB2YPR175W YNR014WP53719 212 aa6.78□□□□□ -1.32
DPB2YPR175W MCH5Q08777 521 aa6.78□□□□□ -1.32
DPB2YPR175W YPL277CQ08989 487 aa6.78□□□□□ -1.32
DPB2YPR175W ERP4Q12450 207 aa6.78□□□□□ -1.32
DPB2YPR175W SNF1P06782 633 aaKnown RBP6.78□□□□□ -1.32
DPB2YPR175W STE14P32584 239 aa6.78□□□□□ -1.32
DPB2YPR175W MUD2P36084 527 aaKnown RBP6.78□□□□□ -1.32
DPB2YPR175W SDP1P40479 209 aa6.78□□□□□ -1.32
DPB2YPR175W OPY2Q06810 360 aa6.78□□□□□ -1.32
DPB2YPR175W BRE4Q07660 1125 aa6.78□□□□□ -1.32
DPB2YPR175W SPS1P08458 490 aa6.77□□□□□ -1.33
DPB2YPR175W MTF2P10849 440 aa6.77□□□□□ -1.33
DPB2YPR175W MTC7P32633 139 aa6.77□□□□□ -1.33
DPB2YPR175W AXL2P38928 823 aa6.77□□□□□ -1.33
DPB2YPR175W STT3P39007 718 aaKnown RBP6.77□□□□□ -1.33
DPB2YPR175W YNR071CP53757 342 aa6.77□□□□□ -1.33
DPB2YPR175W MUS81Q04149 632 aaPredicted RBP6.77□□□□□ -1.33
DPB2YPR175W IMH1Q06704 911 aaKnown RBP6.77□□□□□ -1.33
DPB2YPR175W TRM8Q12009 286 aa6.77□□□□□ -1.33
DPB2YPR175W FOB1O13329 566 aa6.77□□□□□ -1.33
DPB2YPR175W CDC31P06704 161 aaKnown RBP6.77□□□□□ -1.33
DPB2YPR175W SAN1P22470 610 aa6.77□□□□□ -1.33
DPB2YPR175W VPS8P39702 1274 aa6.77□□□□□ -1.33
DPB2YPR175W SAW1P39735 261 aa6.77□□□□□ -1.33
DPB2YPR175W ZRG8P40021 1076 aa6.77□□□□□ -1.33
DPB2YPR175W TDA6Q06466 467 aa6.77□□□□□ -1.33
DPB2YPR175W PSF3Q12146 194 aa6.77□□□□□ -1.33
DPB2YPR175W YCK2P23292 546 aaKnown RBP6.76□□□□□ -1.33
DPB2YPR175W YCL049CP25577 312 aa6.76□□□□□ -1.33
DPB2YPR175W PGM1P33401 570 aaKnown RBP6.76□□□□□ -1.33
DPB2YPR175W RKM3P38222 552 aa6.76□□□□□ -1.33
DPB2YPR175W YHR078WP38799 552 aa6.76□□□□□ -1.33
DPB2YPR175W SAK1P38990 1142 aa6.76□□□□□ -1.33
DPB2YPR175W SLN1P39928 1220 aaPredicted RBP6.76□□□□□ -1.33
DPB2YPR175W DPH1P40487 425 aaKnown RBP6.76□□□□□ -1.33
DPB2YPR175W PFA3P42836 336 aa6.76□□□□□ -1.33
DPB2YPR175W GPD1Q00055 391 aaKnown RBP6.76□□□□□ -1.33
DPB2YPR175W YMR210WQ03649 449 aa6.76□□□□□ -1.33
DPB2YPR175W SSY1Q03770 852 aa6.76□□□□□ -1.33
DPB2YPR175W YBR138CP38277 524 aa6.75□□□□□ -1.33
DPB2YPR175W IFA38P38286 347 aa6.75□□□□□ -1.33
DPB2YPR175W VTS1Q08831 523 aaKnown RBP RIP-Chip data6.75□□□□□ -1.33not detected
DPB2YPR175W DBP10Q12389 995 aaKnown RBP6.75□□□□□ -1.33
DPB2YPR175W LPX1Q12405 387 aaKnown RBP6.75□□□□□ -1.33
DPB2YPR175W KCS1Q12494 1050 aa6.75□□□□□ -1.33
DPB2YPR175W VAS1P07806 1104 aaKnown RBP6.75□□□□□ -1.33
DPB2YPR175W SPE1P08432 466 aa6.75□□□□□ -1.33
DPB2YPR175W GCD1P09032 578 aaPredicted RBP6.75□□□□□ -1.33
DPB2YPR175W TUB3P09734 445 aaKnown RBP6.75□□□□□ -1.33
DPB2YPR175W GUK1P15454 187 aaKnown RBP6.75□□□□□ -1.33
DPB2YPR175W CBP3P21560 335 aa6.75□□□□□ -1.33
DPB2YPR175W MCX1P38323 520 aaPredicted RBP6.75□□□□□ -1.33
DPB2YPR175W MND2P40577 368 aa6.75□□□□□ -1.33
DPB2YPR175W BUD8P41698 603 aa6.75□□□□□ -1.33
DPB2YPR175W SLU7Q02775 382 aaKnown RBP6.75□□□□□ -1.33
DPB2YPR175W YDR215CQ12240 137 aa6.75□□□□□ -1.33
DPB2YPR175W MCM3P24279 971 aaKnown RBP6.74□□□□□ -1.33
DPB2YPR175W SET3P36124 751 aa6.74□□□□□ -1.33
DPB2YPR175W UPC2Q12151 913 aa6.74□□□□□ -1.33
DPB2YPR175W SSM4P40318 1319 aa6.74□□□□□ -1.33
DPB2YPR175W INH1P01097 85 aa6.73□□□□□ -1.33
DPB2YPR175W ADE2P21264 571 aaKnown RBP6.73□□□□□ -1.33
DPB2YPR175W MSS4P38994 779 aa6.73□□□□□ -1.33
DPB2YPR175W YNL195CP40168 261 aa6.73□□□□□ -1.33
DPB2YPR175W TMA108P40462 946 aa6.73□□□□□ -1.33
DPB2YPR175W ISA1Q07821 250 aaPredicted RBP6.73□□□□□ -1.33
DPB2YPR175W RER1P25560 188 aa6.73□□□□□ -1.33
DPB2YPR175W NGG1P32494 702 aa6.73□□□□□ -1.33
DPB2YPR175W APL2P36000 726 aaPredicted RBP6.73□□□□□ -1.33
DPB2YPR175W YKR075CP36155 307 aa6.73□□□□□ -1.33
DPB2YPR175W URM1P40554 99 aaPredicted RBP6.73□□□□□ -1.33
DPB2YPR175W YAP1802P53309 568 aa6.73□□□□□ -1.33
DPB2YPR175W HMO1Q03973 246 aaKnown RBP6.73□□□□□ -1.33
DPB2YPR175W VID22Q05934 901 aa6.73□□□□□ -1.33
DPB2YPR175W VPS36Q06696 566 aa6.73□□□□□ -1.33
DPB2YPR175W KIN2P13186 1147 aaKnown RBP6.72□□□□□ -1.33
DPB2YPR175W SWI4P25302 1093 aaKnown RBP6.72□□□□□ -1.33
DPB2YPR175W DGR2P32330 852 aa6.72□□□□□ -1.33
DPB2YPR175W FRD1P32614 470 aaKnown RBP6.72□□□□□ -1.33
DPB2YPR175W SAF1P38352 637 aa6.72□□□□□ -1.33
DPB2YPR175W SMK1P41808 388 aa6.72□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 34 ms