RNA–Protein interactions for RNA: YPR002W

PDH1, Transcript of Putative 2-methylcitrate dehydratase, yeastyeast

Gene PDH1, Length 1,551 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDH1YPR002W YLR297WQ05899 129 aa5.82□□□□□ -1.48
PDH1YPR002W MED1Q12321 566 aa5.82□□□□□ -1.48
PDH1YPR002W WHI5Q12416 295 aa5.82□□□□□ -1.48
PDH1YPR002W YLR462WO13556 202 aa5.81□□□□□ -1.48
PDH1YPR002W SCP160P06105 1222 aaKnown RBP RIP-Chip data5.81□□□□□ -1.48not detected
PDH1YPR002W SRV2P17555 526 aaKnown RBP5.81□□□□□ -1.48
PDH1YPR002W CAP1P28495 268 aaKnown RBP5.81□□□□□ -1.48
PDH1YPR002W GCD6P32501 712 aaKnown RBP5.81□□□□□ -1.48
PDH1YPR002W VPS35P34110 944 aa5.81□□□□□ -1.48
PDH1YPR002W SQT1P35184 431 aa5.81□□□□□ -1.48
PDH1YPR002W YHL049CP38722 271 aa5.81□□□□□ -1.48
PDH1YPR002W PIH1P38768 344 aa5.81□□□□□ -1.48
PDH1YPR002W YEL075CP39972 122 aa5.81□□□□□ -1.48
PDH1YPR002W YER189WP40104 122 aa5.81□□□□□ -1.48
PDH1YPR002W YFL064CP43540 174 aa5.81□□□□□ -1.48
PDH1YPR002W MTG1Q03151 367 aaPredicted RBP5.81□□□□□ -1.48
PDH1YPR002W TDA5Q06417 326 aaKnown RBP5.81□□□□□ -1.48
PDH1YPR002W YBL111CQ3E7Y5 667 aa5.81□□□□□ -1.48
PDH1YPR002W FLO11P08640 1367 aa5.81□□□□□ -1.48
PDH1YPR002W MSN1P22148 382 aa5.8□□□□□ -1.48
PDH1YPR002W EUG1P32474 517 aa5.8□□□□□ -1.48
PDH1YPR002W YEL1P34225 687 aa5.8□□□□□ -1.48
PDH1YPR002W TRZ1P36159 838 aaPredicted RBP5.8□□□□□ -1.48
PDH1YPR002W YBR032WP38223 100 aa5.8□□□□□ -1.48
PDH1YPR002W PAN5P38787 379 aa5.8□□□□□ -1.48
PDH1YPR002W AXL1P40851 1208 aa5.8□□□□□ -1.48
PDH1YPR002W BRO1P48582 844 aa5.8□□□□□ -1.48
PDH1YPR002W CAF120P53836 1060 aa5.8□□□□□ -1.48
PDH1YPR002W PGA2P53903 129 aa5.8□□□□□ -1.48
PDH1YPR002W YLH47Q06493 454 aa5.8□□□□□ -1.48
PDH1YPR002W SUE1Q06524 206 aa5.8□□□□□ -1.48
PDH1YPR002W OSW1Q08692 278 aa5.8□□□□□ -1.48
PDH1YPR002W YPL277CQ08989 487 aa5.8□□□□□ -1.48
PDH1YPR002W SEY1Q99287 776 aa5.8□□□□□ -1.48
PDH1YPR002W RPL8AP17076 256 aaKnown RBP5.8□□□□□ -1.48
PDH1YPR002W PRP4P20053 465 aaKnown RBP5.8□□□□□ -1.48
PDH1YPR002W BAS1P22035 811 aa5.8□□□□□ -1.48
PDH1YPR002W RET1P22276 1149 aaKnown RBP5.8□□□□□ -1.48
PDH1YPR002W MVD1P32377 396 aaKnown RBP5.8□□□□□ -1.48
PDH1YPR002W YKL050CP35736 922 aa5.8□□□□□ -1.48
PDH1YPR002W YKL023WP36103 277 aaKnown RBP5.8□□□□□ -1.48
PDH1YPR002W PGM2P37012 569 aaKnown RBP5.8□□□□□ -1.48
PDH1YPR002W GIP1P38229 639 aa5.8□□□□□ -1.48
PDH1YPR002W PFF1P38244 976 aa5.8□□□□□ -1.48
PDH1YPR002W HIS2P38635 335 aa5.8□□□□□ -1.48
PDH1YPR002W REV7P38927 245 aa5.8□□□□□ -1.48
PDH1YPR002W RAD55P38953 406 aa5.8□□□□□ -1.48
PDH1YPR002W VPS53P47061 822 aa5.8□□□□□ -1.48
PDH1YPR002W VID30P53076 958 aa5.8□□□□□ -1.48
PDH1YPR002W GTR1Q00582 310 aa5.8□□□□□ -1.48
PDH1YPR002W ERO1Q03103 563 aa5.8□□□□□ -1.48
PDH1YPR002W IRC3Q06683 689 aa5.8□□□□□ -1.48
PDH1YPR002W HIF1Q12373 385 aa5.8□□□□□ -1.48
PDH1YPR002W JIP3O13555 125 aa5.79□□□□□ -1.48
PDH1YPR002W RPP1AP05318 106 aaPredicted RBP5.79□□□□□ -1.48
PDH1YPR002W CLN3P13365 580 aa5.79□□□□□ -1.48
PDH1YPR002W KAR3P17119 729 aa5.79□□□□□ -1.48
PDH1YPR002W MRPL16P38064 232 aa5.79□□□□□ -1.48
PDH1YPR002W ECM2P38241 364 aaKnown RBP5.79□□□□□ -1.48
PDH1YPR002W VPS45P38932 577 aa5.79□□□□□ -1.48
PDH1YPR002W SAK1P38990 1142 aa5.79□□□□□ -1.48
PDH1YPR002W END3P39013 349 aa5.79□□□□□ -1.48
PDH1YPR002W KAP123P40069 1113 aaKnown RBP5.79□□□□□ -1.48
PDH1YPR002W NTA1P40354 457 aa5.79□□□□□ -1.48
PDH1YPR002W LCB2P40970 561 aa5.79□□□□□ -1.48
PDH1YPR002W SKP1P52286 194 aa5.79□□□□□ -1.48
PDH1YPR002W MDR1P53258 950 aa5.79□□□□□ -1.48
PDH1YPR002W YNL040WP53960 456 aaPredicted RBP5.79□□□□□ -1.48
PDH1YPR002W UTP6Q02354 440 aaKnown RBP5.79□□□□□ -1.48
PDH1YPR002W YPL062WQ02781 134 aa5.79□□□□□ -1.48
PDH1YPR002W GAS5Q08193 484 aa5.79□□□□□ -1.48
PDH1YPR002W ABP140Q08641 628 aaKnown RBP5.79□□□□□ -1.48
PDH1YPR002W PCL8Q08966 492 aa5.79□□□□□ -1.48
PDH1YPR002W ACM1Q08981 209 aa5.79□□□□□ -1.48
PDH1YPR002W GNT1Q12096 491 aa5.79□□□□□ -1.48
PDH1YPR002W STB3Q12427 513 aa5.79□□□□□ -1.48
PDH1YPR002W ILV1P00927 576 aaKnown RBP5.78□□□□□ -1.48
PDH1YPR002W ILV2P07342 687 aaKnown RBP5.78□□□□□ -1.48
PDH1YPR002W PCK1P10963 549 aa5.78□□□□□ -1.48
PDH1YPR002W POL3P15436 1097 aa5.78□□□□□ -1.48
PDH1YPR002W HEM15P16622 393 aa5.78□□□□□ -1.48
PDH1YPR002W SAM2P19358 384 aaKnown RBP5.78□□□□□ -1.48
PDH1YPR002W MRPS28P21771 286 aa5.78□□□□□ -1.48
PDH1YPR002W PRP22P24384 1145 aaKnown RBP5.78□□□□□ -1.48
PDH1YPR002W PUF4P25339 888 aaKnown RBP RIP-Chip data5.78□□□□□ -1.48not detected
PDH1YPR002W RPS7AP26786 190 aaKnown RBP5.78□□□□□ -1.48
PDH1YPR002W RRT2P38332 387 aa5.78□□□□□ -1.48
PDH1YPR002W BSD2P38356 321 aa5.78□□□□□ -1.48
PDH1YPR002W SUL1P38359 859 aa5.78□□□□□ -1.48
PDH1YPR002W INA22P40576 216 aa5.78□□□□□ -1.48
PDH1YPR002W RGD2P43556 714 aa5.78□□□□□ -1.48
PDH1YPR002W LYS4P49367 693 aaPredicted RBP5.78□□□□□ -1.48
PDH1YPR002W CPR6P53691 371 aaKnown RBP5.78□□□□□ -1.48
PDH1YPR002W YNL011CP53980 444 aa5.78□□□□□ -1.48
PDH1YPR002W ORC4P54791 529 aa5.78□□□□□ -1.48
PDH1YPR002W NAM8Q00539 523 aaKnown RBP5.78□□□□□ -1.48
PDH1YPR002W UBP3Q01477 912 aaKnown RBP RIP-Chip data5.78□□□□□ -1.48not detected
PDH1YPR002W SHR3Q02774 210 aa5.78□□□□□ -1.48
PDH1YPR002W GIR2Q03768 265 aaPredicted RBP5.78□□□□□ -1.48
PDH1YPR002W MNL2Q12205 849 aa5.78□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 34.2 ms