RNA–Protein interactions for RNA: YPL085W

SEC16, Transcript of COPII vesicle coat protein required for ER transport vesicle budding, yeastyeast

Gene SEC16, Length 6,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC16YPL085W UBC1P21734 215 aaKnown RBP2.33□□□□□ -2.04
SEC16YPL085W SPS22P25380 463 aa2.33□□□□□ -2.04
SEC16YPL085W MSH1P25846 959 aa2.33□□□□□ -2.04
SEC16YPL085W SNU114P36048 1008 aaKnown RBP2.33□□□□□ -2.04
SEC16YPL085W FMP23P38231 175 aa2.33□□□□□ -2.04
SEC16YPL085W PET100P38958 111 aa2.33□□□□□ -2.04
SEC16YPL085W RPL13BP40212 199 aaKnown RBP2.33□□□□□ -2.04
SEC16YPL085W ESL1P40456 1118 aa2.33□□□□□ -2.04
SEC16YPL085W RPC17P47076 161 aa2.33□□□□□ -2.04
SEC16YPL085W RBL2P48606 106 aaKnown RBP2.33□□□□□ -2.04
SEC16YPL085W YNL035CP53962 389 aaKnown RBP2.33□□□□□ -2.04
SEC16YPL085W TCO89Q08921 799 aa2.33□□□□□ -2.04
SEC16YPL085W RPL13AQ12690 199 aaPredicted RBP2.33□□□□□ -2.04
SEC16YPL085W SEY1Q99287 776 aa2.33□□□□□ -2.04
SEC16YPL085W COX4P04037 155 aa2.32□□□□□ -2.04
SEC16YPL085W YAP1P19880 650 aaKnown RBP2.32□□□□□ -2.04
SEC16YPL085W RAD53P22216 821 aa2.32□□□□□ -2.04
SEC16YPL085W GSY1P23337 708 aa2.32□□□□□ -2.04
SEC16YPL085W KIP1P28742 1111 aa2.32□□□□□ -2.04
SEC16YPL085W IRE1P32361 1115 aa2.32□□□□□ -2.04
SEC16YPL085W MAL33P38157 468 aa2.32□□□□□ -2.04
SEC16YPL085W CIN4P39110 191 aa2.32□□□□□ -2.04
SEC16YPL085W ILM1P47155 203 aa2.32□□□□□ -2.04
SEC16YPL085W KAP114P53067 1004 aa2.32□□□□□ -2.04
SEC16YPL085W CGR1P53188 120 aa2.32□□□□□ -2.04
SEC16YPL085W CPR6P53691 371 aaKnown RBP2.32□□□□□ -2.04
SEC16YPL085W ABZ2Q03266 374 aa2.32□□□□□ -2.04
SEC16YPL085W NHP10Q03435 203 aa2.32□□□□□ -2.04
SEC16YPL085W HIM1Q06674 414 aa2.32□□□□□ -2.04
SEC16YPL085W IWR1Q07532 353 aaPredicted RBP2.32□□□□□ -2.04
SEC16YPL085W MST1P07236 462 aa2.32□□□□□ -2.04
SEC16YPL085W KSS1P14681 368 aa2.32□□□□□ -2.04
SEC16YPL085W RFC5P38251 354 aa2.32□□□□□ -2.04
SEC16YPL085W CCT2P39076 527 aaKnown RBP2.32□□□□□ -2.04
SEC16YPL085W YMR124WP39523 943 aaKnown RBP2.32□□□□□ -2.04
SEC16YPL085W ZRG8P40021 1076 aa2.32□□□□□ -2.04
SEC16YPL085W YJL171CP46992 396 aa2.32□□□□□ -2.04
SEC16YPL085W JSN1P47135 1091 aaKnown RBP RIP-Chip data2.32□□□□□ -2.04not detected
SEC16YPL085W PEX8P53248 589 aa2.32□□□□□ -2.04
SEC16YPL085W KTR5P53966 522 aaPredicted RBP2.32□□□□□ -2.04
SEC16YPL085W VPS20Q04272 221 aa2.32□□□□□ -2.04
SEC16YPL085W NUT2Q06213 157 aa2.32□□□□□ -2.04
SEC16YPL085W HNT3Q08702 217 aa2.32□□□□□ -2.04
SEC16YPL085W IES3Q12345 250 aa2.32□□□□□ -2.04
SEC16YPL085W ATG11Q12527 1178 aa2.32□□□□□ -2.04
SEC16YPL085W RDS2P19541 446 aaKnown RBP2.32□□□□□ -2.04
SEC16YPL085W SEC14P24280 304 aaKnown RBP2.32□□□□□ -2.04
SEC16YPL085W EMC1P25574 760 aa2.32□□□□□ -2.04
SEC16YPL085W PAH1P32567 862 aa2.32□□□□□ -2.04
SEC16YPL085W SAC6P32599 642 aaKnown RBP2.32□□□□□ -2.04
SEC16YPL085W FMO1P38866 432 aa2.32□□□□□ -2.04
SEC16YPL085W LYS9P38999 446 aa2.32□□□□□ -2.04
SEC16YPL085W MKT1P40850 830 aaKnown RBP2.32□□□□□ -2.04
SEC16YPL085W GYP8P43570 497 aa2.32□□□□□ -2.04
SEC16YPL085W MAD3P47074 515 aa2.32□□□□□ -2.04
SEC16YPL085W ALT1P52893 592 aa2.32□□□□□ -2.04
SEC16YPL085W KTR6P54070 446 aa2.32□□□□□ -2.04
SEC16YPL085W HEL2Q05580 639 aaKnown RBP2.32□□□□□ -2.04
SEC16YPL085W VID22Q05934 901 aa2.32□□□□□ -2.04
SEC16YPL085W ABP140Q08641 628 aaKnown RBP2.32□□□□□ -2.04
SEC16YPL085W GET4Q12125 312 aa2.32□□□□□ -2.04
SEC16YPL085W YLL058WQ12198 575 aa2.32□□□□□ -2.04
SEC16YPL085W YOR012WQ12351 137 aa2.32□□□□□ -2.04
SEC16YPL085W IMA3P0CW40 589 aa2.32□□□□□ -2.04
SEC16YPL085W IMA4P0CW41 589 aa2.32□□□□□ -2.04
SEC16YPL085W MIP1P15801 1254 aa2.32□□□□□ -2.04
SEC16YPL085W ADP1P25371 1049 aa2.32□□□□□ -2.04
SEC16YPL085W ZIP1P31111 875 aa2.32□□□□□ -2.04
SEC16YPL085W IMP2'P32351 346 aa2.32□□□□□ -2.04
SEC16YPL085W LTV1P34078 463 aa2.32□□□□□ -2.04
SEC16YPL085W YCR087C-AP37263 153 aa2.32□□□□□ -2.04
SEC16YPL085W POP4P38336 279 aa2.32□□□□□ -2.04
SEC16YPL085W AZR1P50080 613 aa2.32□□□□□ -2.04
SEC16YPL085W VPS30Q02948 557 aa2.32□□□□□ -2.04
SEC16YPL085W YKU80Q04437 629 aa2.32□□□□□ -2.04
SEC16YPL085W STE23Q06010 1027 aa2.32□□□□□ -2.04
SEC16YPL085W YDL124WQ07551 312 aaKnown RBP2.32□□□□□ -2.04
SEC16YPL085W CMS1Q07897 291 aaKnown RBP2.32□□□□□ -2.04
SEC16YPL085W IMA2Q08295 589 aa2.32□□□□□ -2.04
SEC16YPL085W TAF3Q12297 353 aa2.32□□□□□ -2.04
SEC16YPL085W DBP5P20449 482 aaKnown RBP2.32□□□□□ -2.04
SEC16YPL085W CLB4P24871 460 aa2.32□□□□□ -2.04
SEC16YPL085W KAR4P25583 335 aa2.32□□□□□ -2.04
SEC16YPL085W MF(ALPHA)2P32435 120 aa2.32□□□□□ -2.04
SEC16YPL085W RPT1P33299 467 aaKnown RBP2.32□□□□□ -2.04
SEC16YPL085W SPP381P38282 291 aaPredicted RBP2.32□□□□□ -2.04
SEC16YPL085W TMA108P40462 946 aa2.32□□□□□ -2.04
SEC16YPL085W YGR035CP53222 116 aa2.32□□□□□ -2.04
SEC16YPL085W YGR111WP53265 400 aa2.32□□□□□ -2.04
SEC16YPL085W HOL1P53389 586 aa2.32□□□□□ -2.04
SEC16YPL085W PTA1Q01329 785 aaPredicted RBP2.32□□□□□ -2.04
SEC16YPL085W STE6P12866 1290 aa2.31□□□□□ -2.04
SEC16YPL085W RAD24P32641 659 aa2.31□□□□□ -2.04
SEC16YPL085W YBL028CP38202 106 aa2.31□□□□□ -2.04
SEC16YPL085W YHL012WP38709 493 aa2.31□□□□□ -2.04
SEC16YPL085W HSE1P38753 452 aa2.31□□□□□ -2.04
SEC16YPL085W NPR2P39923 615 aa2.31□□□□□ -2.04
SEC16YPL085W JEM1P40358 645 aa2.31□□□□□ -2.04
SEC16YPL085W MVP1P40959 511 aaKnown RBP2.31□□□□□ -2.04
SEC16YPL085W RTT101P47050 842 aa2.31□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 23.7 ms