RNA–Protein interactions for RNA: YOL124C

TRM11, Transcript of Catalytic subunit of adoMet-dependent tRNA methyltransferase complex, yeast

Gene TRM11, Length 1,302 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRM11	YOL124C	RBA50	Q04418	439 aa		4.74	□□□□□ -1.65
TRM11	YOL124C	TMA10	Q06177	86 aa		4.74	□□□□□ -1.65
TRM11	YOL124C	UBX5	Q06682	500 aa		4.74	□□□□□ -1.65
TRM11	YOL124C	GUD1	Q07729	489 aa		4.74	□□□□□ -1.65
TRM11	YOL124C	NTO1	Q12311	748 aa		4.74	□□□□□ -1.65
TRM11	YOL124C	ECM29	P38737	1868 aa		4.74	□□□□□ -1.65
TRM11	YOL124C	HXK1	P04806	485 aa	Known RBP	4.73	□□□□□ -1.65
TRM11	YOL124C	RPL22A	P05749	121 aa	Known RBP	4.73	□□□□□ -1.65
TRM11	YOL124C	FBP1	P09201	348 aa		4.73	□□□□□ -1.65
TRM11	YOL124C	RAD18	P10862	487 aa		4.73	□□□□□ -1.65
TRM11	YOL124C	ALG1	P16661	449 aa		4.73	□□□□□ -1.65
TRM11	YOL124C	HCA4	P20448	770 aa	Known RBP	4.73	□□□□□ -1.65
TRM11	YOL124C	RDS1	P25611	832 aa		4.73	□□□□□ -1.65
TRM11	YOL124C	MCM2	P29469	868 aa		4.73	□□□□□ -1.65
TRM11	YOL124C	TGL1	P34163	548 aa		4.73	□□□□□ -1.65
TRM11	YOL124C	MGE1	P38523	228 aa		4.73	□□□□□ -1.65
TRM11	YOL124C	TPM2	P40414	161 aa		4.73	□□□□□ -1.65
TRM11	YOL124C	AIM21	P40563	679 aa		4.73	□□□□□ -1.65
TRM11	YOL124C	CIR1	P42940	261 aa		4.73	□□□□□ -1.65
TRM11	YOL124C	ENT3	P47160	408 aa		4.73	□□□□□ -1.65
TRM11	YOL124C	ALD6	P54115	500 aa	Known RBP	4.73	□□□□□ -1.65
TRM11	YOL124C	PEX19	Q07418	342 aa		4.73	□□□□□ -1.65
TRM11	YOL124C	HSP82	P02829	709 aa	Known RBP	4.72	□□□□□ -1.65
TRM11	YOL124C	DED1	P06634	604 aa	Known RBP	4.72	□□□□□ -1.65
TRM11	YOL124C	RPL8A	P17076	256 aa	Known RBP	4.72	□□□□□ -1.65
TRM11	YOL124C	VPS1	P21576	704 aa	Known RBP	4.72	□□□□□ -1.65
TRM11	YOL124C	ROX1	P25042	368 aa		4.72	□□□□□ -1.65
TRM11	YOL124C	SEC8	P32855	1065 aa		4.72	□□□□□ -1.65
TRM11	YOL124C	APE3	P37302	537 aa	Known RBP	4.72	□□□□□ -1.65
TRM11	YOL124C	SNF7	P39929	240 aa	Known RBP	4.72	□□□□□ -1.65
TRM11	YOL124C	YGR153W	P48238	217 aa		4.72	□□□□□ -1.65
TRM11	YOL124C	ASE1	P50275	885 aa		4.72	□□□□□ -1.65
TRM11	YOL124C	CUE3	P53137	624 aa	Known RBP	4.72	□□□□□ -1.65
TRM11	YOL124C	SUN4	P53616	420 aa		4.72	□□□□□ -1.65
TRM11	YOL124C	TMA64	Q04600	565 aa	Known RBP	4.72	□□□□□ -1.65
TRM11	YOL124C	SPH1	Q06160	661 aa		4.72	□□□□□ -1.65
TRM11	YOL124C	SUE1	Q06524	206 aa		4.72	□□□□□ -1.65
TRM11	YOL124C	DDP1	Q99321	188 aa	Known RBP	4.72	□□□□□ -1.65
TRM11	YOL124C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.72	□□□□□ -1.65	not detected
TRM11	YOL124C	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.72	□□□□□ -1.65	not detected
TRM11	YOL124C	CDC60	P26637	1090 aa	Known RBP	4.72	□□□□□ -1.65
TRM11	YOL124C	URA1	P28272	314 aa	Predicted RBP	4.72	□□□□□ -1.65
TRM11	YOL124C	SAS3	P34218	831 aa		4.72	□□□□□ -1.65
TRM11	YOL124C	YKR018C	P36114	725 aa		4.72	□□□□□ -1.65
TRM11	YOL124C	FAA3	P39002	694 aa		4.72	□□□□□ -1.65
TRM11	YOL124C	FMS1	P50264	508 aa		4.72	□□□□□ -1.65
TRM11	YOL124C	PIL1	P53252	339 aa	Known RBP	4.72	□□□□□ -1.65
TRM11	YOL124C	SLI1	P53304	468 aa		4.72	□□□□□ -1.65
TRM11	YOL124C	OYE2	Q03558	400 aa	Known RBP	4.72	□□□□□ -1.65
TRM11	YOL124C	RRP15	Q06511	250 aa	Predicted RBP	4.72	□□□□□ -1.65
TRM11	YOL124C	CFT2	Q12102	859 aa	Predicted RBP	4.72	□□□□□ -1.65
TRM11	YOL124C	TIP41	Q12199	356 aa		4.72	□□□□□ -1.65
TRM11	YOL124C	FRS2	P15625	503 aa	Known RBP	4.71	□□□□□ -1.66
TRM11	YOL124C	THR4	P16120	514 aa	Known RBP	4.71	□□□□□ -1.66
TRM11	YOL124C	MCD4	P36051	919 aa		4.71	□□□□□ -1.66
TRM11	YOL124C	ERG7	P38604	731 aa		4.71	□□□□□ -1.66
TRM11	YOL124C	STT3	P39007	718 aa	Known RBP	4.71	□□□□□ -1.66
TRM11	YOL124C	RPS26A	P39938	119 aa	Known RBP	4.71	□□□□□ -1.66
TRM11	YOL124C	RPS26B	P39939	119 aa	Known RBP	4.71	□□□□□ -1.66
TRM11	YOL124C	PIC2	P40035	300 aa		4.71	□□□□□ -1.66
TRM11	YOL124C	CCT5	P40413	562 aa	Known RBP	4.71	□□□□□ -1.66
TRM11	YOL124C	DJP1	P40564	432 aa		4.71	□□□□□ -1.66
TRM11	YOL124C	YJR107W	P47145	328 aa		4.71	□□□□□ -1.66
TRM11	YOL124C	LIF1	P53150	421 aa		4.71	□□□□□ -1.66
TRM11	YOL124C	YGR125W	P53273	1036 aa		4.71	□□□□□ -1.66
TRM11	YOL124C	VPS62	P53285	467 aa		4.71	□□□□□ -1.66
TRM11	YOL124C	SIZ1	Q04195	904 aa		4.71	□□□□□ -1.66
TRM11	YOL124C	SPR28	Q04921	423 aa		4.71	□□□□□ -1.66
TRM11	YOL124C	WHI4	Q07655	649 aa	Known RBP	4.71	□□□□□ -1.66
TRM11	YOL124C	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.71	□□□□□ -1.66	not detected
TRM11	YOL124C	TY3A-G	Q12173	290 aa		4.71	□□□□□ -1.66
TRM11	YOL124C	SVS1	Q12254	260 aa		4.71	□□□□□ -1.66
TRM11	YOL124C	TY3A-I	Q99219	290 aa		4.71	□□□□□ -1.66
TRM11	YOL124C	MOT1	P32333	1867 aa		4.7	□□□□□ -1.66
TRM11	YOL124C	TY1B-A	O13527	1196 aa	Known RBP	4.7	□□□□□ -1.66
TRM11	YOL124C	VMA2	P16140	517 aa	Known RBP	4.7	□□□□□ -1.66
TRM11	YOL124C	BMH1	P29311	267 aa	Known RBP	4.7	□□□□□ -1.66
TRM11	YOL124C	EUG1	P32474	517 aa		4.7	□□□□□ -1.66
TRM11	YOL124C	MCR1	P36060	302 aa	Known RBP	4.7	□□□□□ -1.66
TRM11	YOL124C	RGD1	P38339	666 aa		4.7	□□□□□ -1.66
TRM11	YOL124C	SUL1	P38359	859 aa		4.7	□□□□□ -1.66
TRM11	YOL124C	NDT80	P38830	627 aa		4.7	□□□□□ -1.66
TRM11	YOL124C	THI6	P41835	540 aa		4.7	□□□□□ -1.66
TRM11	YOL124C	YPT11	P48559	417 aa		4.7	□□□□□ -1.66
TRM11	YOL124C	RTC4	P53850	401 aa		4.7	□□□□□ -1.66
TRM11	YOL124C	BNI5	P53890	448 aa	Known RBP	4.7	□□□□□ -1.66
TRM11	YOL124C	EAF7	P53911	425 aa	Known RBP	4.7	□□□□□ -1.66
TRM11	YOL124C	PTA1	Q01329	785 aa	Predicted RBP	4.7	□□□□□ -1.66
TRM11	YOL124C	MFM1	Q02783	413 aa		4.7	□□□□□ -1.66
TRM11	YOL124C	MMR1	Q06324	491 aa		4.7	□□□□□ -1.66
TRM11	YOL124C	ISA1	Q07821	250 aa	Predicted RBP	4.7	□□□□□ -1.66
TRM11	YOL124C	ETT1	Q08421	412 aa	Known RBP	4.7	□□□□□ -1.66
TRM11	YOL124C	RIB2	Q12362	591 aa	Known RBP	4.7	□□□□□ -1.66
TRM11	YOL124C	FOB1	O13329	566 aa		4.69	□□□□□ -1.66
TRM11	YOL124C	SAM1	P10659	382 aa	Known RBP	4.69	□□□□□ -1.66
TRM11	YOL124C	CKA2	P19454	339 aa		4.69	□□□□□ -1.66
TRM11	YOL124C	PWP2	P25635	923 aa	Known RBP	4.69	□□□□□ -1.66
TRM11	YOL124C	APL1	P27351	700 aa		4.69	□□□□□ -1.66
TRM11	YOL124C	MCM4	P30665	933 aa	Known RBP	4.69	□□□□□ -1.66
TRM11	YOL124C	RPN12	P32496	274 aa		4.69	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 107.1 ms