RNA–Protein interactions for RNA: YNR017W

TIM23, Transcript of Essential component of the TIM23 complex, yeast

Gene TIM23, Length 669 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIM23	YNR017W	PCM1	P38628	557 aa	Known RBP	11.79	□□□□□ -0.52
TIM23	YNR017W	CCC2	P38995	1004 aa		11.79	□□□□□ -0.52
TIM23	YNR017W	SHQ1	P40486	507 aa	Predicted RBP	11.79	□□□□□ -0.52
TIM23	YNR017W	MND1	P53102	219 aa		11.79	□□□□□ -0.52
TIM23	YNR017W	ERG5	P54781	538 aa		11.79	□□□□□ -0.52
TIM23	YNR017W	OPY2	Q06810	360 aa		11.79	□□□□□ -0.52
TIM23	YNR017W	MAS1	P10507	462 aa		11.78	□□□□□ -0.52
TIM23	YNR017W	SAT4	P25333	603 aa	Known RBP	11.78	□□□□□ -0.52
TIM23	YNR017W	PGS1	P25578	521 aa		11.78	□□□□□ -0.52
TIM23	YNR017W	SPC110	P32380	944 aa		11.78	□□□□□ -0.52
TIM23	YNR017W	YMC2	P38087	329 aa		11.78	□□□□□ -0.52
TIM23	YNR017W	EXO5	P38289	585 aa		11.78	□□□□□ -0.52
TIM23	YNR017W	RGD1	P38339	666 aa		11.78	□□□□□ -0.52
TIM23	YNR017W	TAF1	P46677	1066 aa		11.78	□□□□□ -0.52
TIM23	YNR017W	PHO86	P46956	311 aa		11.78	□□□□□ -0.52
TIM23	YNR017W	UTP5	Q04177	643 aa	Known RBP	11.78	□□□□□ -0.52
TIM23	YNR017W	YLR257W	Q06146	321 aa	Known RBP	11.78	□□□□□ -0.52
TIM23	YNR017W	YCG1	Q06680	1035 aa		11.78	□□□□□ -0.52
TIM23	YNR017W	LEA1	Q08963	238 aa	Predicted RBP	11.78	□□□□□ -0.52
TIM23	YNR017W	YOL098C	Q12496	1037 aa		11.78	□□□□□ -0.52
TIM23	YNR017W	SPT5	P27692	1063 aa	Known RBP	11.77	□□□□□ -0.53
TIM23	YNR017W	PEP7	P32609	515 aa		11.77	□□□□□ -0.53
TIM23	YNR017W	TKL2	P33315	681 aa		11.77	□□□□□ -0.53
TIM23	YNR017W	TGL3	P40308	642 aa		11.77	□□□□□ -0.53
TIM23	YNR017W	YTA12	P40341	825 aa		11.77	□□□□□ -0.53
TIM23	YNR017W	MAF1	P41910	395 aa		11.77	□□□□□ -0.53
TIM23	YNR017W	GPD1	Q00055	391 aa	Known RBP	11.77	□□□□□ -0.53
TIM23	YNR017W	PIG1	Q06216	648 aa		11.77	□□□□□ -0.53
TIM23	YNR017W	TRE1	Q08919	783 aa		11.77	□□□□□ -0.53
TIM23	YNR017W	GPM2	Q12008	311 aa		11.77	□□□□□ -0.53
TIM23	YNR017W	MTF2	P10849	440 aa		11.76	□□□□□ -0.53
TIM23	YNR017W	CYC8	P14922	966 aa		11.76	□□□□□ -0.53
TIM23	YNR017W	BFA1	P47113	574 aa		11.76	□□□□□ -0.53
TIM23	YNR017W	YNL011C	P53980	444 aa		11.76	□□□□□ -0.53
TIM23	YNR017W	PRM6	Q04705	352 aa		11.76	□□□□□ -0.53
TIM23	YNR017W	VPS38	Q05919	439 aa		11.76	□□□□□ -0.53
TIM23	YNR017W	HRT3	Q12347	344 aa		11.76	□□□□□ -0.53
TIM23	YNR017W	RRP43	P25359	394 aa	Predicted RBP	11.75	□□□□□ -0.53
TIM23	YNR017W	LRE1	P25579	583 aa	Known RBP	11.75	□□□□□ -0.53
TIM23	YNR017W	MET4	P32389	672 aa		11.75	□□□□□ -0.53
TIM23	YNR017W	OYE3	P41816	400 aa	Predicted RBP	11.75	□□□□□ -0.53
TIM23	YNR017W	JIP3	O13555	125 aa		11.74	□□□□□ -0.53
TIM23	YNR017W	PEX1	P24004	1043 aa		11.74	□□□□□ -0.53
TIM23	YNR017W	YKL050C	P35736	922 aa		11.74	□□□□□ -0.53
TIM23	YNR017W	RAD55	P38953	406 aa		11.74	□□□□□ -0.53
TIM23	YNR017W	PUS2	P53167	370 aa		11.74	□□□□□ -0.53
TIM23	YNR017W	HOP2	P53187	214 aa		11.74	□□□□□ -0.53
TIM23	YNR017W	CTR9	P89105	1077 aa		11.74	□□□□□ -0.53
TIM23	YNR017W	VMA4	P22203	233 aa	Known RBP	11.73	□□□□□ -0.53
TIM23	YNR017W	GYP6	P32806	458 aa		11.73	□□□□□ -0.53
TIM23	YNR017W	SAF1	P38352	637 aa		11.73	□□□□□ -0.53
TIM23	YNR017W	CBR1	P38626	284 aa	Known RBP	11.73	□□□□□ -0.53
TIM23	YNR017W	YMR124W	P39523	943 aa	Known RBP	11.73	□□□□□ -0.53
TIM23	YNR017W	YEL075C	P39972	122 aa		11.73	□□□□□ -0.53
TIM23	YNR017W	VPS25	P47142	202 aa		11.73	□□□□□ -0.53
TIM23	YNR017W	ALF1	P53904	254 aa		11.73	□□□□□ -0.53
TIM23	YNR017W	ARO80	Q04052	950 aa		11.73	□□□□□ -0.53
TIM23	YNR017W	VPS54	Q12071	889 aa		11.73	□□□□□ -0.53
TIM23	YNR017W	SPE1	P08432	466 aa		11.72	□□□□□ -0.53
TIM23	YNR017W	RRN6	P32786	894 aa		11.72	□□□□□ -0.53
TIM23	YNR017W	MRP4	P32902	394 aa		11.72	□□□□□ -0.53
TIM23	YNR017W	YBR056W	P38081	501 aa		11.72	□□□□□ -0.53
TIM23	YNR017W	PCH2	P38126	564 aa		11.72	□□□□□ -0.53
TIM23	YNR017W	YBL036C	P38197	257 aa		11.72	□□□□□ -0.53
TIM23	YNR017W	SIF2	P38262	535 aa		11.72	□□□□□ -0.53
TIM23	YNR017W	TDA3	P38758	523 aa		11.72	□□□□□ -0.53
TIM23	YNR017W	YGR021W	P53212	290 aa		11.72	□□□□□ -0.53
TIM23	YNR017W	SYH1	Q02875	849 aa	Known RBP	11.72	□□□□□ -0.53
TIM23	YNR017W	YDR222W	Q04925	415 aa		11.72	□□□□□ -0.53
TIM23	YNR017W	MDM38	Q08179	573 aa		11.72	□□□□□ -0.53
TIM23	YNR017W	PDE1	P22434	369 aa		11.71	□□□□□ -0.53
TIM23	YNR017W	RPT2	P40327	437 aa	Known RBP	11.71	□□□□□ -0.53
TIM23	YNR017W	OSW7	P43611	510 aa		11.71	□□□□□ -0.53
TIM23	YNR017W	PFD1	P46988	109 aa		11.71	□□□□□ -0.53
TIM23	YNR017W	ASG7	P46993	209 aa		11.71	□□□□□ -0.53
TIM23	YNR017W	YJL045W	P47052	634 aa		11.71	□□□□□ -0.53
TIM23	YNR017W	YGR111W	P53265	400 aa		11.71	□□□□□ -0.53
TIM23	YNR017W	SLG1	P54867	378 aa		11.71	□□□□□ -0.53
TIM23	YNR017W	DAS2	Q12084	232 aa		11.71	□□□□□ -0.53
TIM23	YNR017W	NBP2	Q12163	236 aa		11.71	□□□□□ -0.53
TIM23	YNR017W	BI2	P03873	423 aa		11.7	□□□□□ -0.54
TIM23	YNR017W	BI4	P03879	638 aa		11.7	□□□□□ -0.54
TIM23	YNR017W	SEC23	P15303	768 aa	Known RBP	11.7	□□□□□ -0.54
TIM23	YNR017W	COQ8	P27697	501 aa		11.7	□□□□□ -0.54
TIM23	YNR017W	QNS1	P38795	714 aa	Known RBP	11.7	□□□□□ -0.54
TIM23	YNR017W	SET5	P38890	526 aa	Known RBP	11.7	□□□□□ -0.54
TIM23	YNR017W	PSY2	P40164	858 aa		11.7	□□□□□ -0.54
TIM23	YNR017W	DIS3	Q08162	1001 aa	Known RBP	11.7	□□□□□ -0.54
TIM23	YNR017W	BI3	Q9ZZW7	517 aa		11.7	□□□□□ -0.54
TIM23	YNR017W	HMG2	P12684	1045 aa		11.69	□□□□□ -0.54
TIM23	YNR017W	RAD57	P25301	460 aa		11.69	□□□□□ -0.54
TIM23	YNR017W	ABZ1	P37254	787 aa	Predicted RBP	11.69	□□□□□ -0.54
TIM23	YNR017W	CDC27	P38042	758 aa		11.69	□□□□□ -0.54
TIM23	YNR017W	PEX28	P38848	579 aa		11.69	□□□□□ -0.54
TIM23	YNR017W	MOB1	P40484	314 aa		11.69	□□□□□ -0.54
TIM23	YNR017W	GUF1	P46943	645 aa		11.69	□□□□□ -0.54
TIM23	YNR017W	YMR1	P47147	688 aa	Known RBP RIP-Chip data	11.69	□□□□□ -0.54	not detected
TIM23	YNR017W	HER2	Q03557	464 aa		11.69	□□□□□ -0.54
TIM23	YNR017W	YMR018W	Q04364	514 aa		11.69	□□□□□ -0.54
TIM23	YNR017W	RCL1	Q08096	367 aa	Predicted RBP	11.69	□□□□□ -0.54

Retrieved 100 of 5,963 RNA–protein pairs in 88.4 ms